RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 UGT2B11O75310 529 aa15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 CTAG2O75638 210 aa15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 CBR3O75828 277 aa15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 ESRRBO95718 433 aa15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 IL3P08700 152 aa15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 CPN1P15169 458 aa15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 PCSK2P16519 638 aa15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 ALDH9A1P49189 494 aa15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 ASCL1P50553 236 aa15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 NAGLUP54802 743 aa15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 LTB4RQ15722 352 aa15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 EIPR1Q53HC9 387 aa15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 FAM219BQ5XKK7 198 aa15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 DESI1Q6ICB0 168 aa15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 ANGPTL8Q6UXH0 198 aa15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 CEP112Q8N8E3 955 aa15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 FAM83FQ8NEG4 500 aaPredicted RBP15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 MBD3L2Q8NHZ7 208 aaPredicted RBP15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 ZPLD1Q8TCW7 415 aa15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 RNF138Q8WVD3 245 aa15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 RNASE6Q93091 150 aaKnown RBP15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 ABTB1Q969K4 478 aaPredicted RBP15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 SLC35A4Q96G79 324 aa15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 OSBPL11Q9BXB4 747 aa15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 SLC6A5Q9Y345 797 aa15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 SPG11Q96JI7 2443 aa15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 FREM3P0C091 2139 aa15.7■□□□□ 0.1
VPS9D1-203ENST00000563798 CCDC151A5D8V7 595 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 KDM4EB2RXH2 506 aaPredicted RBP15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 PCDH7O60245 1069 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 PLOD3O60568 738 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 ZWINTO95229 277 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 IL18BPO95998 194 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 IL2RAP01589 272 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 CT45A8P0DMV1 189 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 CT45A9P0DMV2 189 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 HMOX2P30519 316 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 KIR2DL3P43628 341 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 HTR6P50406 440 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 ZNF136P52737 540 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 RIPPLY3P57055 190 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 NAA20P61599 178 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 MRPS35P82673 323 aaKnown RBP15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 ACSM2AQ08AH3 577 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 HEPACAMQ14CZ8 416 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 NNATQ16517 81 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 CT45A2Q5DJT8 189 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 WIPI1Q5MNZ9 446 aaPredicted RBP15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 ACSM2BQ68CK6 577 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 FAM180BQ6P0A1 224 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 TMEM200AQ86VY9 491 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 CCDC116Q8IYX3 515 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 WDSUB1Q8N9V3 476 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 C16orf78Q8WTQ4 265 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 TMCO6Q96DC7 493 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 LRRC46Q96FV0 321 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 APIPQ96GX9 242 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 VSTM2LQ96N03 204 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 UCN2Q96RP3 112 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 OR2B2Q9GZK3 357 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 EPB41L4BQ9H329 900 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 PSMC3IPQ9P2W1 217 aaPredicted RBP15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 DCDC2Q9UHG0 476 aa15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 MRPS18CQ9Y3D5 142 aaKnown RBP15.69■□□□□ 0.1
VPS9D1-203ENST00000563798 ANKHD1Q8IWZ3 2542 aaKnown RBP15.68■□□□□ 0.1
VPS9D1-203ENST00000563798 PRAMEF25A6NGN4 478 aa15.68■□□□□ 0.1
VPS9D1-203ENST00000563798 H3BQF6 201 aa15.68■□□□□ 0.1
VPS9D1-203ENST00000563798 TSPAN2O60636 221 aa15.68■□□□□ 0.1
VPS9D1-203ENST00000563798 CD1EP15812 388 aa15.68■□□□□ 0.1
VPS9D1-203ENST00000563798 TIA1P31483 386 aaKnown RBP eCLIP15.68■□□□□ 0.1
VPS9D1-203ENST00000563798 DNAJA1P31689 397 aaKnown RBP15.68■□□□□ 0.1
VPS9D1-203ENST00000563798 HMGCS1Q01581 520 aa15.68■□□□□ 0.1
VPS9D1-203ENST00000563798 SLC29A2Q14542 456 aa15.68■□□□□ 0.1
VPS9D1-203ENST00000563798 DCST1Q5T197 706 aa15.68■□□□□ 0.1
VPS9D1-203ENST00000563798 ADGRE4PQ86SQ3 457 aa15.68■□□□□ 0.1
VPS9D1-203ENST00000563798 KIF18AQ8NI77 898 aa15.68■□□□□ 0.1
VPS9D1-203ENST00000563798 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.68■□□□□ 0.1
VPS9D1-203ENST00000563798 NINJ1Q92982 152 aa15.68■□□□□ 0.1
VPS9D1-203ENST00000563798 CCDC126Q96EE4 140 aa15.68■□□□□ 0.1
VPS9D1-203ENST00000563798 COL21A1Q96P44 957 aa15.68■□□□□ 0.1
VPS9D1-203ENST00000563798 STMN4Q9H169 189 aaPredicted RBP15.68■□□□□ 0.1
VPS9D1-203ENST00000563798 GSTO2Q9H4Y5 243 aa15.68■□□□□ 0.1
VPS9D1-203ENST00000563798 GALNT9Q9HCQ5 603 aa15.68■□□□□ 0.1
VPS9D1-203ENST00000563798 SLC35C2Q9NQQ7 365 aa15.68■□□□□ 0.1
VPS9D1-203ENST00000563798 TAS2R7Q9NYW3 318 aa15.68■□□□□ 0.1
VPS9D1-203ENST00000563798 JKAMPQ9P055 326 aa15.68■□□□□ 0.1
VPS9D1-203ENST00000563798 CAMK2AQ9UQM7 478 aa15.68■□□□□ 0.1
VPS9D1-203ENST00000563798 WBP11Q9Y2W2 641 aaKnown RBP15.68■□□□□ 0.1
VPS9D1-203ENST00000563798 GNG14A0A1W2PPG7 69 aa15.67■□□□□ 0.1
VPS9D1-203ENST00000563798 FAM153BP0C7A2 387 aa15.67■□□□□ 0.1
VPS9D1-203ENST00000563798 PYGBP11216 843 aa15.67■□□□□ 0.1
VPS9D1-203ENST00000563798 BMP5P22003 454 aa15.67■□□□□ 0.1
VPS9D1-203ENST00000563798 MPIP34949 423 aa15.67■□□□□ 0.1
VPS9D1-203ENST00000563798 GCKP35557 465 aa15.67■□□□□ 0.1
VPS9D1-203ENST00000563798 WNT3P56703 355 aa15.67■□□□□ 0.1
VPS9D1-203ENST00000563798 DAZAP2Q15038 168 aaPredicted RBP15.67■□□□□ 0.1
VPS9D1-203ENST00000563798 TOMM20Q15388 145 aa15.67■□□□□ 0.1
VPS9D1-203ENST00000563798 FAM153CQ494X1 144 aa15.67■□□□□ 0.1
VPS9D1-203ENST00000563798 SH2D5Q6ZV89 423 aa15.67■□□□□ 0.1
VPS9D1-203ENST00000563798 YRDCQ86U90 279 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms