RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 FRKP42685 505 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-211ENST00000557623 MANFP55145 182 aaKnown RBP11.5□□□□□ -0.57
SLIRP-211ENST00000557623 UBAP2LQ14157 1087 aaKnown RBP11.5□□□□□ -0.57
SLIRP-211ENST00000557623 TTMPQ5BVD1 217 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 TMEM107Q6UX40 140 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 CLEC18BQ6UXF7 455 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 SLC22A16Q86VW1 577 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 SIAH3Q8IW03 269 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 GHDCQ8N2G8 530 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 CLEC18CQ8NCF0 446 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 SIMC1Q8NDZ2 872 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 OR10G3Q8NGC4 313 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 ELP4Q96EB1 424 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 PPP1R36Q96LQ0 422 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 BTBD9Q96Q07 612 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 NUF2Q9BZD4 464 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 ACBD3Q9H3P7 528 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 AKTIPQ9H8T0 292 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 MEAF6Q9HAF1 191 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 IL1RL2Q9HB29 575 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 FOLH1BQ9HBA9 442 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 DEPPQ9NTK1 212 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 DDX18Q9NVP1 670 aaKnown RBP11.5□□□□□ -0.57
SLIRP-211ENST00000557623 PNPOQ9NVS9 261 aa11.5□□□□□ -0.57
SLIRP-211ENST00000557623 C19orf53Q9UNZ5 99 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-211ENST00000557623 GPR55Q9Y2T6 319 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-211ENST00000557623 CHCHD2Q9Y6H1 151 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-211ENST00000557623 A0A1B0GUH1 482 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 ANKRD33BA6NCL7 494 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 TTC36A6NLP5 189 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 HDAC3O15379 428 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 ERN1O75460 977 aaKnown RBP11.49□□□□□ -0.57
SLIRP-211ENST00000557623 PPM1BO75688 479 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 AGFG2O95081 481 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 LBPP18428 481 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 KCNK10P57789 538 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 PPIAP62937 165 aaKnown RBP11.49□□□□□ -0.57
SLIRP-211ENST00000557623 KCNJ2P63252 427 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 PLCXD2Q0VAA5 305 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 HSPB3Q12988 150 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 PTGR1Q14914 329 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 MLC1Q15049 377 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 ZNHIT3Q15649 155 aaPredicted RBP11.49□□□□□ -0.57
SLIRP-211ENST00000557623 NNATQ16517 81 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 ZNF385BQ569K4 471 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 RNFT1Q5M7Z0 435 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 CPTPQ5TA50 214 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 ANKRD26P1Q6NSI1 321 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 PAOXQ6QHF9 649 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 NUP54Q7Z3B4 507 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 PRR22Q8IZ63 422 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 SLC34A3Q8N130 599 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 OR2L13Q8N349 312 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 OR5M3Q8NGP4 307 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 CEP70Q8NHQ1 597 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 SPPL2AQ8TCT8 520 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 DIO2Q92813 273 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 CIDECQ96AQ7 238 aaPredicted RBP11.49□□□□□ -0.57
SLIRP-211ENST00000557623 OMA1Q96E52 524 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 VSTM2LQ96N03 204 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 TTTY12Q9BZ98 90 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 ANKRA2Q9H9E1 313 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 CNOT11Q9UKZ1 510 aaKnown RBP11.49□□□□□ -0.57
SLIRP-211ENST00000557623 BOKQ9UMX3 212 aaPredicted RBP11.49□□□□□ -0.57
SLIRP-211ENST00000557623 OSGIN2Q9Y236 505 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 SLC5A6Q9Y289 635 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.49□□□□□ -0.57
SLIRP-211ENST00000557623 NBASA2RRP1 2371 aa11.49□□□□□ -0.57
SLIRP-211ENST00000557623 PINLYPA6NC86 204 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 UPK1AO00322 258 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 LCE2BO14633 110 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 HS6ST1O60243 411 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 GLSO94925 669 aaPredicted RBP11.48□□□□□ -0.57
SLIRP-211ENST00000557623 SNX4O95219 450 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 ABCB1P08183 1280 aaPredicted RBP11.48□□□□□ -0.57
SLIRP-211ENST00000557623 STSP08842 583 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 CT45A8P0DMV1 189 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 CT45A9P0DMV2 189 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 G6PDP11413 515 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 KRT20P35900 424 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 PIGAP37287 484 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 RFC3P40938 356 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 DNASE1L1P49184 302 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 CASP6P55212 293 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 CLDN8P56748 225 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 FBXW4P57775 412 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 C21orf58P58505 322 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 MRPS22P82650 360 aaKnown RBP11.48□□□□□ -0.57
SLIRP-211ENST00000557623 OCRLQ01968 901 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 ZNF155Q12901 538 aaPredicted RBP11.48□□□□□ -0.57
SLIRP-211ENST00000557623 HYAL4Q2M3T9 481 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 LSM12Q3MHD2 195 aaKnown RBP11.48□□□□□ -0.57
SLIRP-211ENST00000557623 C4orf17Q53FE4 359 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 CT45A2Q5DJT8 189 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 PRAMEF20Q5VT98 475 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 TMEM81Q6P7N7 255 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 TMEM64Q6YI46 380 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 ZNF551Q7Z340 670 aaPredicted RBP11.48□□□□□ -0.57
SLIRP-211ENST00000557623 OR7A2PQ8NGA2 310 aa11.48□□□□□ -0.57
SLIRP-211ENST00000557623 DYDC1Q8WWB3 177 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms