RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 LSP1P33241 339 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 ACVR1BP36896 505 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 SLCO1A2P46721 670 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 TRPC1P48995 793 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 TTPAP49638 278 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 CASP9P55211 416 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 HSD17B7P56937 341 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 DSCR9P59020 149 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 KCNJ2P63252 427 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 ACVR1Q04771 509 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 TSTA3Q13630 321 aaPredicted RBP4.25□□□□□ -1.73
SCFD1-223ENST00000557076 BMPR2Q13873 1038 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 SPARCL1Q14515 664 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 POU6F1Q14863 301 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 PHKG1Q16816 387 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 DEFB134Q4QY38 66 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 ODF2Q5BJF6 829 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 BEX5Q5H9J7 111 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.25□□□□□ -1.73
SCFD1-223ENST00000557076 AARS2Q5JTZ9 985 aaKnown RBP4.25□□□□□ -1.73
SCFD1-223ENST00000557076 PTRHD1Q6GMV3 140 aaKnown RBP4.25□□□□□ -1.73
SCFD1-223ENST00000557076 ZNF474Q6S9Z5 364 aaPredicted RBP4.25□□□□□ -1.73
SCFD1-223ENST00000557076 AFTPHQ6ULP2 937 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 SCIMPQ6UWF3 145 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 ZNF704Q6ZNC4 412 aaPredicted RBP4.25□□□□□ -1.73
SCFD1-223ENST00000557076 H2AFVQ71UI9 128 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 LRRC6Q86X45 466 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 DND1Q8IYX4 353 aaKnown RBP4.25□□□□□ -1.73
SCFD1-223ENST00000557076 KRT222Q8N1A0 295 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 TMEM132CQ8N3T6 1108 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 SLC15A4Q8N697 577 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 C3orf56Q8N813 242 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 MFSD9Q8NBP5 474 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 MORN4Q8NDC4 146 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 OR13J1Q8NGT2 312 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 SNX33Q8WV41 574 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 DAZLQ92904 295 aaKnown RBP4.25□□□□□ -1.73
SCFD1-223ENST00000557076 INTS12Q96CB8 462 aaKnown RBP4.25□□□□□ -1.73
SCFD1-223ENST00000557076 REPS1Q96D71 796 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 STARD4Q96DR4 205 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 SMIM10Q96HG1 83 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 QKIQ96PU8 341 aaKnown RBP eCLIP4.25□□□□□ -1.731e-6■■■■■ 34.7
SCFD1-223ENST00000557076 PIGQQ9BRB3 760 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 DUSP26Q9BV47 211 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 PCBD2Q9H0N5 130 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 P2RY12Q9H244 342 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 UBQLN3Q9H347 655 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 PRSS50Q9UI38 385 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 CAMK2AQ9UQM7 478 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 RUVBL2Q9Y230 463 aaKnown RBP4.25□□□□□ -1.73
SCFD1-223ENST00000557076 CLDN16Q9Y5I7 305 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 CLCA3PQ9Y6N3 262 aa4.25□□□□□ -1.73
SCFD1-223ENST00000557076 KMT2CQ8NEZ4 4911 aaKnown RBP4.25□□□□□ -1.73
SCFD1-223ENST00000557076 PRR14LQ5THK1 2151 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 ARHGAP21Q5T5U3 1957 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 SLCO1B7G3V0H7 640 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 H7C0C1 242 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 PSMD3O43242 534 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 CEP104O60308 925 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 TRIM3O75382 744 aaPredicted RBP4.24□□□□□ -1.73
SCFD1-223ENST00000557076 TRAPPC6AO75865 159 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 SNX4O95219 450 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 ACTL6AO96019 429 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 IGHV4-39P01824 125 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 CATP04040 527 aaKnown RBP4.24□□□□□ -1.73
SCFD1-223ENST00000557076 SOD3P08294 240 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 CYP4B1P13584 511 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 PPP3CBP16298 524 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 COILP38432 576 aaPredicted RBP4.24□□□□□ -1.73
SCFD1-223ENST00000557076 SKIV2L2P42285 1042 aaKnown RBP4.24□□□□□ -1.73
SCFD1-223ENST00000557076 SLC1A1P43005 524 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 RPL21P46778 160 aaKnown RBP4.24□□□□□ -1.73
SCFD1-223ENST00000557076 ATP5OP48047 213 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 CDK9P50750 372 aaKnown RBP4.24□□□□□ -1.73
SCFD1-223ENST00000557076 NAGLUP54802 743 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 IL2P60568 153 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 UBE2HP62256 183 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 FUT7Q11130 342 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 PARP6Q2NL67 630 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 SPDYE7PQ495Y7 208 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 FASTKD1Q53R41 847 aaKnown RBP4.24□□□□□ -1.73
SCFD1-223ENST00000557076 FAM120AOSQ5T036 256 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 THEMIS2Q5TEJ8 643 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 ZNF534Q76KX8 674 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 LDB1Q86U70 411 aaPredicted RBP4.24□□□□□ -1.73
SCFD1-223ENST00000557076 RCOR2Q8IZ40 523 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 ARIH2OSQ8N7S6 290 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 GPATCH11Q8N954 259 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 ABHD11Q8NFV4 315 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 OR4K1Q8NGD4 311 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 OR2W6PQ8NHA6 318 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 GABPB2Q8TAK5 448 aaPredicted RBP4.24□□□□□ -1.73
SCFD1-223ENST00000557076 NUBPLQ8TB37 319 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 SLC35G2Q8TBE7 412 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 ZCCHC10Q8TBK6 192 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 UTP15Q8TED0 518 aaKnown RBP4.24□□□□□ -1.73
SCFD1-223ENST00000557076 SMAP2Q8WU79 429 aaPredicted RBP4.24□□□□□ -1.73
SCFD1-223ENST00000557076 PTPMT1Q8WUK0 201 aaPredicted RBP4.24□□□□□ -1.73
SCFD1-223ENST00000557076 AKAP1Q92667 903 aaKnown RBP eCLIP4.24□□□□□ -1.73
SCFD1-223ENST00000557076 PEX13Q92968 403 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms