RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 NPY2RP49146 381 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 LIM2P55344 173 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 RWDD2BP57060 319 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 REEP5Q00765 189 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 SRYQ05066 204 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 RCN2Q14257 317 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 RBBP5Q15291 538 aaKnown RBP6.18□□□□□ -1.42
ATXN3-236ENST00000556220 TOMM20Q15388 145 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 TMEM249Q2WGJ8 235 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 DUPD1Q68J44 220 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 C12orf54Q6X4T0 127 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 ETV3LQ6ZN32 361 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 ZNF572Q7Z3I7 529 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-236ENST00000556220 YRDCQ86U90 279 aaKnown RBP6.18□□□□□ -1.42
ATXN3-236ENST00000556220 MED12LQ86YW9 2145 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 KLHDC8AQ8IYD2 350 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 CPNE9Q8IYJ1 553 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 BVESQ8NE79 360 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 C7orf57Q8NEG2 295 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 FAM83FQ8NEG4 500 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-236ENST00000556220 OR56A3Q8NH54 315 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 CD200R1Q8TD46 325 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 AKAP1Q92667 903 aaKnown RBP eCLIP6.18□□□□□ -1.42
ATXN3-236ENST00000556220 CAVIN3Q969G5 261 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 NEIL2Q969S2 332 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 PYCR2Q96C36 320 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 PGM2Q96G03 612 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 HES6Q96HZ4 224 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 TNFRSF13CQ96RJ3 184 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 CSF3RQ99062 836 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 TMEM204Q9BSN7 226 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 IL22Q9GZX6 179 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 OPN3Q9H1Y3 402 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-236ENST00000556220 ESRP2Q9H6T0 727 aaKnown RBP6.18□□□□□ -1.42
ATXN3-236ENST00000556220 INTS10Q9NVR2 710 aaKnown RBP6.18□□□□□ -1.42
ATXN3-236ENST00000556220 WWOXQ9NZC7 414 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 BFARQ9NZS9 450 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 CLCF1Q9UBD9 225 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 AMFRQ9UKV5 643 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 DAPP1Q9UN19 280 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-236ENST00000556220 NCKAP5O14513 1909 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 RAI1Q7Z5J4 1906 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-236ENST00000556220 CADP27708 2225 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 CMYA5Q8N3K9 4069 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 A0A088AWK7 358 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 A0A096LNT2 108 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 LRIT2A6NDA9 550 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 H0Y3Z8 333 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 ERI3O43414 337 aaKnown RBP6.17□□□□□ -1.42
ATXN3-236ENST00000556220 LDB3O75112 727 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 KCNH1O95259 989 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 TGM6O95932 706 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 IFNB1P01574 187 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 IGHV4-39P01824 125 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 THBDP07204 575 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 C8GP07360 202 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 SOD3P08294 240 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 HIST1H2AGP0C0S8 130 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-236ENST00000556220 COX7A2P14406 83 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 HIST1H2ADP20671 130 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 ZNF10P21506 573 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-236ENST00000556220 TBXA2RP21731 343 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 GCKP35557 465 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 KCNJ5P48544 419 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 MASP1P48740 699 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 CASP9P55211 416 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 VLDLRP98155 873 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 FUT7Q11130 342 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 SP140Q13342 867 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 KLF1Q13351 362 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-236ENST00000556220 TIGD3Q6B0B8 471 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 CYB5R2Q6BCY4 276 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 UGT3A1Q6NUS8 523 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 ADAM5Q6NVV9 412 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 NEPROQ6NW34 567 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 ZNF549Q6P9A3 640 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 VWA1Q6PCB0 445 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 ENPP6Q6UWR7 440 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 GRAMD2AQ8IUY3 354 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 PALM2Q8IXS6 379 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 ARIH2OSQ8N7S6 290 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 CNEP1R1Q8N9A8 125 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 SGMS2Q8NHU3 365 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 SPPL2AQ8TCT8 520 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 ATL1Q8WXF7 558 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 CTHRC1Q96CG8 243 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 REPS1Q96D71 796 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 MS4A6EQ96DS6 147 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 TMEM41AQ96HV5 264 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 HIST1H2AHQ96KK5 128 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 RILPQ96NA2 401 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 SERINC2Q96SA4 455 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 OSBPL9Q96SU4 736 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 KRT12Q99456 494 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 GPR21Q99679 349 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 HIST1H2AJQ99878 128 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 AIF1LQ9BQI0 150 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 RHNO1Q9BSD3 238 aa6.17□□□□□ -1.42
ATXN3-236ENST00000556220 H2AFJQ9BTM1 129 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms