RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 GPR55Q9Y2T6 319 aaPredicted RBP18.81■□□□□ 0.6
VTI1B-205ENST00000555543 PCNX1Q96RV3 2341 aa18.81■□□□□ 0.6
VTI1B-205ENST00000555543 NCOA6Q14686 2063 aaPredicted RBP18.81■□□□□ 0.6
VTI1B-205ENST00000555543 DNAJC13O75165 2243 aa18.81■□□□□ 0.6
VTI1B-205ENST00000555543 TO15178 435 aa18.8■□□□□ 0.6
VTI1B-205ENST00000555543 TM9SF1O15321 606 aa18.8■□□□□ 0.6
VTI1B-205ENST00000555543 AKAP10O43572 662 aa18.8■□□□□ 0.6
VTI1B-205ENST00000555543 BCAS2O75934 225 aaPredicted RBP18.8■□□□□ 0.6
VTI1B-205ENST00000555543 CT45A8P0DMV1 189 aa18.8■□□□□ 0.6
VTI1B-205ENST00000555543 CT45A9P0DMV2 189 aa18.8■□□□□ 0.6
VTI1B-205ENST00000555543 ESRRAP11474 423 aaPredicted RBP18.8■□□□□ 0.6
VTI1B-205ENST00000555543 DCAF7P61962 342 aa18.8■□□□□ 0.6
VTI1B-205ENST00000555543 CHI3L2Q15782 390 aa18.8■□□□□ 0.6
VTI1B-205ENST00000555543 CT45A2Q5DJT8 189 aa18.8■□□□□ 0.6
VTI1B-205ENST00000555543 EMC4Q5J8M3 183 aa18.8■□□□□ 0.6
VTI1B-205ENST00000555543 FNDC7Q5VTL7 733 aa18.8■□□□□ 0.6
VTI1B-205ENST00000555543 MTFR2Q6P444 385 aa18.8■□□□□ 0.6
VTI1B-205ENST00000555543 TMEM107Q6UX40 140 aa18.8■□□□□ 0.6
VTI1B-205ENST00000555543 TRILQ7L0X0 811 aa18.8■□□□□ 0.6
VTI1B-205ENST00000555543 MRGPRGQ86SM5 289 aa18.8■□□□□ 0.6
VTI1B-205ENST00000555543 NTNG2Q96CW9 530 aa18.8■□□□□ 0.6
VTI1B-205ENST00000555543 ZNF597Q96LX8 424 aa18.8■□□□□ 0.6
VTI1B-205ENST00000555543 NODALQ96S42 347 aa18.8■□□□□ 0.6
VTI1B-205ENST00000555543 DMRTA2Q96SC8 542 aa18.8■□□□□ 0.6
VTI1B-205ENST00000555543 SECISBP2Q96T21 854 aaKnown RBP18.8■□□□□ 0.6
VTI1B-205ENST00000555543 ANGPTL4Q9BY76 406 aa18.8■□□□□ 0.6
VTI1B-205ENST00000555543 FOLH1BQ9HBA9 442 aa18.8■□□□□ 0.6
VTI1B-205ENST00000555543 TNFRSF10DQ9UBN6 386 aa18.8■□□□□ 0.6
VTI1B-205ENST00000555543 TMED5Q9Y3A6 229 aa18.8■□□□□ 0.6
VTI1B-205ENST00000555543 ACTL7BQ9Y614 415 aa18.8■□□□□ 0.6
VTI1B-205ENST00000555543 NINQ8N4C6 2090 aa18.8■□□□□ 0.6
VTI1B-205ENST00000555543 NPIPA2E9PIF3 369 aa18.79■□□□□ 0.6
VTI1B-205ENST00000555543 NPIPA3F8WFD2 350 aa18.79■□□□□ 0.6
VTI1B-205ENST00000555543 BIRC5O15392 142 aa18.79■□□□□ 0.6
VTI1B-205ENST00000555543 PEX11AO75192 247 aa18.79■□□□□ 0.6
VTI1B-205ENST00000555543 UGT2B11O75310 529 aa18.79■□□□□ 0.6
VTI1B-205ENST00000555543 ERN1O75460 977 aaKnown RBP18.79■□□□□ 0.6
VTI1B-205ENST00000555543 SERPINE1P05121 402 aa18.79■□□□□ 0.6
VTI1B-205ENST00000555543 BCKDHAP12694 445 aa18.79■□□□□ 0.6
VTI1B-205ENST00000555543 NAGAP17050 411 aa18.79■□□□□ 0.6
VTI1B-205ENST00000555543 ENDOUP21128 410 aaKnown RBP18.79■□□□□ 0.6
VTI1B-205ENST00000555543 CASP3P42574 277 aa18.79■□□□□ 0.6
VTI1B-205ENST00000555543 TBCELQ5QJ74 424 aa18.79■□□□□ 0.6
VTI1B-205ENST00000555543 BEND6Q5SZJ8 279 aaPredicted RBP18.79■□□□□ 0.6
VTI1B-205ENST00000555543 SLC34A3Q8N130 599 aa18.79■□□□□ 0.6
VTI1B-205ENST00000555543 ZNF808Q8N4W9 903 aaPredicted RBP18.79■□□□□ 0.6
VTI1B-205ENST00000555543 PPP1R14CQ8TAE6 165 aa18.79■□□□□ 0.6
VTI1B-205ENST00000555543 TMBIM1Q969X1 311 aa18.79■□□□□ 0.6
VTI1B-205ENST00000555543 CIDECQ96AQ7 238 aaPredicted RBP18.79■□□□□ 0.6
VTI1B-205ENST00000555543 ZNF764Q96H86 408 aaPredicted RBP18.79■□□□□ 0.6
VTI1B-205ENST00000555543 C20orf27Q9GZN8 174 aa18.79■□□□□ 0.6
VTI1B-205ENST00000555543 STMN4Q9H169 189 aaPredicted RBP18.79■□□□□ 0.6
VTI1B-205ENST00000555543 REEP4Q9H6H4 257 aa18.79■□□□□ 0.6
VTI1B-205ENST00000555543 A0A087WV62 115 aa18.78■□□□□ 0.6
VTI1B-205ENST00000555543 A0A1B0GVC2 190 aa18.78■□□□□ 0.6
VTI1B-205ENST00000555543 E9PLN8 166 aa18.78■□□□□ 0.6
VTI1B-205ENST00000555543 UPK1AO00322 258 aa18.78■□□□□ 0.6
VTI1B-205ENST00000555543 PLOD2O00469 737 aa18.78■□□□□ 0.6
VTI1B-205ENST00000555543 PDPK1O15530 556 aa18.78■□□□□ 0.6
VTI1B-205ENST00000555543 PSMG1O95456 288 aa18.78■□□□□ 0.6
VTI1B-205ENST00000555543 PTGDSP41222 190 aa18.78■□□□□ 0.6
VTI1B-205ENST00000555543 ZNF155Q12901 538 aaPredicted RBP18.78■□□□□ 0.6
VTI1B-205ENST00000555543 PDE7AQ13946 482 aa18.78■□□□□ 0.6
VTI1B-205ENST00000555543 SLC10A1Q14973 349 aa18.78■□□□□ 0.6
VTI1B-205ENST00000555543 CDSNQ15517 529 aa18.78■□□□□ 0.6
VTI1B-205ENST00000555543 ZNF787Q6DD87 383 aa18.78■□□□□ 0.6
VTI1B-205ENST00000555543 PAOXQ6QHF9 649 aa18.78■□□□□ 0.6
VTI1B-205ENST00000555543 RPTNQ6XPR3 784 aa18.78■□□□□ 0.6
VTI1B-205ENST00000555543 ZNF551Q7Z340 670 aaPredicted RBP18.78■□□□□ 0.6
VTI1B-205ENST00000555543 OR2L13Q8N349 312 aa18.78■□□□□ 0.6
VTI1B-205ENST00000555543 RPRMLQ8N4K4 120 aa18.78■□□□□ 0.6
VTI1B-205ENST00000555543 MARVELD2Q8N4S9 558 aa18.78■□□□□ 0.6
VTI1B-205ENST00000555543 PPP3R2Q96LZ3 170 aa18.78■□□□□ 0.6
VTI1B-205ENST00000555543 VKORC1Q9BQB6 163 aa18.78■□□□□ 0.6
VTI1B-205ENST00000555543 C1orf50Q9BV19 199 aa18.78■□□□□ 0.6
VTI1B-205ENST00000555543 SLC6A15Q9H2J7 730 aa18.78■□□□□ 0.6
VTI1B-205ENST00000555543 KCNK9Q9NPC2 374 aa18.78■□□□□ 0.6
VTI1B-205ENST00000555543 C19orf53Q9UNZ5 99 aaPredicted RBP18.78■□□□□ 0.6
VTI1B-205ENST00000555543 TBX19O60806 448 aa18.77■□□□□ 0.6
VTI1B-205ENST00000555543 SLITRK5O94991 958 aa18.77■□□□□ 0.6
VTI1B-205ENST00000555543 ZWINTO95229 277 aa18.77■□□□□ 0.6
VTI1B-205ENST00000555543 HSPA4LO95757 839 aa18.77■□□□□ 0.6
VTI1B-205ENST00000555543 BGNP21810 368 aa18.77■□□□□ 0.6
VTI1B-205ENST00000555543 DCTP40126 519 aa18.77■□□□□ 0.6
VTI1B-205ENST00000555543 PSG6Q00889 435 aa18.77■□□□□ 0.6
VTI1B-205ENST00000555543 HSPB3Q12988 150 aa18.77■□□□□ 0.6
VTI1B-205ENST00000555543 TMEM198Q66K66 360 aa18.77■□□□□ 0.6
VTI1B-205ENST00000555543 NUP54Q7Z3B4 507 aa18.77■□□□□ 0.6
VTI1B-205ENST00000555543 CROCCP2Q86T23 111 aa18.77■□□□□ 0.6
VTI1B-205ENST00000555543 HOMEZQ8IX15 550 aa18.77■□□□□ 0.6
VTI1B-205ENST00000555543 ZNF781Q8N8C0 355 aa18.77■□□□□ 0.6
VTI1B-205ENST00000555543 OR4N2Q8NGD1 307 aa18.77■□□□□ 0.6
VTI1B-205ENST00000555543 OR5M9Q8NGP3 310 aa18.77■□□□□ 0.6
VTI1B-205ENST00000555543 PPCDCQ96CD2 204 aa18.77■□□□□ 0.6
VTI1B-205ENST00000555543 ELP4Q96EB1 424 aa18.77■□□□□ 0.6
VTI1B-205ENST00000555543 METTL7AQ9H8H3 244 aa18.77■□□□□ 0.6
VTI1B-205ENST00000555543 GALNT9Q9HCQ5 603 aa18.77■□□□□ 0.6
VTI1B-205ENST00000555543 PNPLA3Q9NST1 481 aa18.77■□□□□ 0.6
VTI1B-205ENST00000555543 DDX18Q9NVP1 670 aaKnown RBP18.77■□□□□ 0.6
VTI1B-205ENST00000555543 TAS2R9Q9NYW1 312 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms