RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 PSMG1O95456 288 aa12.54□□□□□ -0.4
SNX6-203ENST00000555416 MYZAPP0CAP1 466 aa12.54□□□□□ -0.4
SNX6-203ENST00000555416 GP1BBP13224 206 aa12.54□□□□□ -0.4
SNX6-203ENST00000555416 ABOP16442 354 aa12.54□□□□□ -0.4
SNX6-203ENST00000555416 PTGDSP41222 190 aa12.54□□□□□ -0.4
SNX6-203ENST00000555416 CASP3P42574 277 aa12.54□□□□□ -0.4
SNX6-203ENST00000555416 SLC1A6P48664 564 aa12.54□□□□□ -0.4
SNX6-203ENST00000555416 MAGOHP61326 146 aaKnown RBP12.54□□□□□ -0.4
SNX6-203ENST00000555416 KCNJ2P63252 427 aa12.54□□□□□ -0.4
SNX6-203ENST00000555416 RBPJQ06330 500 aa12.54□□□□□ -0.4
SNX6-203ENST00000555416 CASP8Q14790 479 aa12.54□□□□□ -0.4
SNX6-203ENST00000555416 PTGR1Q14914 329 aa12.54□□□□□ -0.4
SNX6-203ENST00000555416 CDSNQ15517 529 aa12.54□□□□□ -0.4
SNX6-203ENST00000555416 PDCD2Q16342 344 aaPredicted RBP12.54□□□□□ -0.4
SNX6-203ENST00000555416 HYAL4Q2M3T9 481 aa12.54□□□□□ -0.4
SNX6-203ENST00000555416 EMC4Q5J8M3 183 aa12.54□□□□□ -0.4
SNX6-203ENST00000555416 BNC2Q6ZN30 1099 aaPredicted RBP12.54□□□□□ -0.4
SNX6-203ENST00000555416 SLC22A16Q86VW1 577 aa12.54□□□□□ -0.4
SNX6-203ENST00000555416 DND1Q8IYX4 353 aaKnown RBP12.54□□□□□ -0.4
SNX6-203ENST00000555416 LIX1Q8N485 282 aa12.54□□□□□ -0.4
SNX6-203ENST00000555416 OR4N2Q8NGD1 307 aa12.54□□□□□ -0.4
SNX6-203ENST00000555416 MGARPQ8TDB4 240 aa12.54□□□□□ -0.4
SNX6-203ENST00000555416 DIO2Q92813 273 aa12.54□□□□□ -0.4
SNX6-203ENST00000555416 TMBIM1Q969X1 311 aa12.54□□□□□ -0.4
SNX6-203ENST00000555416 ARL8AQ96BM9 186 aa12.54□□□□□ -0.4
SNX6-203ENST00000555416 RILPQ96NA2 401 aa12.54□□□□□ -0.4
SNX6-203ENST00000555416 PAIP2Q9BPZ3 127 aaKnown RBP12.54□□□□□ -0.4
SNX6-203ENST00000555416 ZNF703Q9H7S9 590 aaPredicted RBP12.54□□□□□ -0.4
SNX6-203ENST00000555416 CNIH4Q9P003 139 aa12.54□□□□□ -0.4
SNX6-203ENST00000555416 PRODH2Q9UF12 536 aa12.54□□□□□ -0.4
SNX6-203ENST00000555416 ANKRD33BA6NCL7 494 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 FRG2CA6NGY1 282 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 C17orf51A8MQB3 221 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 TMEM114B3SHH9 223 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 PLOD2O00469 737 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 TO15178 435 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 PDPK1O15530 556 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 ERN1O75460 977 aaKnown RBP12.53□□□□□ -0.4
SNX6-203ENST00000555416 IGHG3P01860 377 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 ENDOUP21128 410 aaKnown RBP12.53□□□□□ -0.4
SNX6-203ENST00000555416 NTSP30990 170 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 PTGS2P35354 604 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 CDK9P50750 372 aaKnown RBP12.53□□□□□ -0.4
SNX6-203ENST00000555416 NRG3P56975 720 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 PLCXD2Q0VAA5 305 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 BST1Q10588 318 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 HSPB3Q12988 150 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.53□□□□□ -0.43e-8■■■□□ 17.1
SNX6-203ENST00000555416 IL23RQ5VWK5 629 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 TRILQ7L0X0 811 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 CROCCP2Q86T23 111 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 OR2L13Q8N349 312 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 FAM109AQ8N4B1 249 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 RPRMLQ8N4K4 120 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 MARVELD2Q8N4S9 558 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 KRTCAP2Q8N6L1 136 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 OR7A2PQ8NGA2 310 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 ITLN2Q8WWU7 325 aaPredicted RBP12.53□□□□□ -0.4
SNX6-203ENST00000555416 PPCDCQ96CD2 204 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 ERP27Q96DN0 273 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 ELP4Q96EB1 424 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 HSPBAP1Q96EW2 488 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 PPP3R2Q96LZ3 170 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 JSRP1Q96MG2 331 aaPredicted RBP12.53□□□□□ -0.4
SNX6-203ENST00000555416 DOHHQ9BU89 302 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 ANGPTL4Q9BY76 406 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 GALNT9Q9HCQ5 603 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 ZFP64Q9NPA5 681 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 PNPOQ9NVS9 261 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 SH3BP4Q9P0V3 963 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 C19orf53Q9UNZ5 99 aaPredicted RBP12.53□□□□□ -0.4
SNX6-203ENST00000555416 CFL2Q9Y281 166 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 TMED5Q9Y3A6 229 aa12.53□□□□□ -0.4
SNX6-203ENST00000555416 A0A087WV62 115 aa12.52□□□□□ -0.41
SNX6-203ENST00000555416 B4DXG7 233 aa12.52□□□□□ -0.41
SNX6-203ENST00000555416 ACOT7O00154 380 aa12.52□□□□□ -0.41
SNX6-203ENST00000555416 ACOX3O15254 700 aa12.52□□□□□ -0.41
SNX6-203ENST00000555416 TSPAN2O60636 221 aa12.52□□□□□ -0.41
SNX6-203ENST00000555416 TBX19O60806 448 aa12.52□□□□□ -0.41
SNX6-203ENST00000555416 LAMP1P11279 417 aa12.52□□□□□ -0.41
SNX6-203ENST00000555416 FRKP42685 505 aaPredicted RBP12.52□□□□□ -0.41
SNX6-203ENST00000555416 PSG6Q00889 435 aa12.52□□□□□ -0.41
SNX6-203ENST00000555416 STX3Q13277 289 aa12.52□□□□□ -0.41
SNX6-203ENST00000555416 ATP6AP1LQ52LC2 224 aa12.52□□□□□ -0.41
SNX6-203ENST00000555416 RGS9BPQ6ZS82 235 aa12.52□□□□□ -0.41
SNX6-203ENST00000555416 MAMDC2Q7Z304 686 aaPredicted RBP12.52□□□□□ -0.41
SNX6-203ENST00000555416 CD163Q86VB7 1156 aa12.52□□□□□ -0.41
SNX6-203ENST00000555416 SLC44A2Q8IWA5 706 aaPredicted RBP12.52□□□□□ -0.41
SNX6-203ENST00000555416 SLC34A3Q8N130 599 aa12.52□□□□□ -0.41
SNX6-203ENST00000555416 FNDC5Q8NAU1 212 aa12.52□□□□□ -0.41
SNX6-203ENST00000555416 FAM57AQ8TBR7 257 aa12.52□□□□□ -0.41
SNX6-203ENST00000555416 TUBGCP3Q96CW5 907 aa12.52□□□□□ -0.41
SNX6-203ENST00000555416 ZNF764Q96H86 408 aaPredicted RBP12.52□□□□□ -0.41
SNX6-203ENST00000555416 GNRHR2Q96P88 292 aa12.52□□□□□ -0.41
SNX6-203ENST00000555416 DMRTA2Q96SC8 542 aa12.52□□□□□ -0.41
SNX6-203ENST00000555416 SLC6A15Q9H2J7 730 aa12.52□□□□□ -0.41
SNX6-203ENST00000555416 FLRT3Q9NZU0 649 aa12.52□□□□□ -0.41
SNX6-203ENST00000555416 SPRR3Q9UBC9 169 aa12.52□□□□□ -0.41
SNX6-203ENST00000555416 ATP6V1HQ9UI12 483 aa12.52□□□□□ -0.41
SNX6-203ENST00000555416 HAO1Q9UJM8 370 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms