RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 SCIMPQ6UWF3 145 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 CENPUQ71F23 418 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 PIWIL4Q7Z3Z4 852 aaKnown RBP4.38□□□□□ -1.71
ATXN3-229ENST00000554672 CAND1Q86VP6 1230 aaKnown RBP4.38□□□□□ -1.71
ATXN3-229ENST00000554672 ZNF321PQ8N8H1 164 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 C9orf106Q8NAJ2 232 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 NUBPLQ8TB37 319 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 SLC22A8Q8TCC7 542 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 SLC5A11Q8WWX8 675 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 IGFBPL1Q8WX77 278 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 KCNJ9Q92806 393 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 UCN3Q969E3 161 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 ABTB1Q969K4 478 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-229ENST00000554672 SPACA9Q96E40 222 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-229ENST00000554672 MFSD3Q96ES6 412 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 JSRP1Q96MG2 331 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-229ENST00000554672 DOHHQ9BU89 302 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 KIFC1Q9BW19 673 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 UGT2B28Q9BY64 529 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 AMBRA1Q9C0C7 1298 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 CCDC68Q9H2F9 335 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 ABHD10Q9NUJ1 306 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 INTS10Q9NVR2 710 aaKnown RBP4.38□□□□□ -1.71
ATXN3-229ENST00000554672 KLHL28Q9NXS3 571 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 IFNKQ9P0W0 207 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 COPS7AQ9UBW8 275 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 PACSIN3Q9UKS6 424 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 PDE10AQ9Y233 779 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 REXO2Q9Y3B8 237 aaKnown RBP4.38□□□□□ -1.71
ATXN3-229ENST00000554672 DMRT1Q9Y5R6 373 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 MAD1L1Q9Y6D9 718 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 COMMD10Q9Y6G5 202 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 SCN2AQ99250 2005 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 A0A088AWK7 358 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 TLDC2A0PJX2 215 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 CTAGE9A4FU28 777 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 GOLGA6L19H0YKK7 550 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 TP53I11O14683 189 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 B3GALT2O43825 422 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 SNX4O95219 450 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 ACTL6AO96019 429 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 IFNB1P01574 187 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 VSIG10L2P0DP72 767 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 CYP4B1P13584 511 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 CPN1P15169 458 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 ZNF10P21506 573 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-229ENST00000554672 SAT1P21673 171 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 CHMP24386 653 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 GCKP35557 465 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 CD79BP40259 229 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 MSH2P43246 934 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 RGS4P49798 205 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 HNRNPFP52597 415 aaKnown RBP4.37□□□□□ -1.71
ATXN3-229ENST00000554672 NR1H2P55055 460 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 NAP1L1P55209 391 aaKnown RBP4.37□□□□□ -1.71
ATXN3-229ENST00000554672 CRADDP78560 199 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 FAM27E3Q08E93 113 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 BIKQ13323 160 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 SP140Q13342 867 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 KLF1Q13351 362 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-229ENST00000554672 CTBP1Q13363 440 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 VEZF1Q14119 521 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 RBBP5Q15291 538 aaKnown RBP4.37□□□□□ -1.71
ATXN3-229ENST00000554672 GAGE13Q4V321 117 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 TOR1AIP1Q5JTV8 583 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 PRAMEF20Q5VT98 475 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 ARMC3Q5W041 872 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 UGT3A1Q6NUS8 523 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 CASC4Q6P4E1 433 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 CES3Q6UWW8 571 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 SH2D5Q6ZV89 423 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 CLNKQ7Z7G1 428 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 LUZP1Q86V48 1076 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 ZNF575Q86XF7 245 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 CPNE9Q8IYJ1 553 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 MAPK1IP1LQ8NDC0 245 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 OR10G3Q8NGC4 313 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 OR56A3Q8NH54 315 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 SLC2A12Q8TD20 617 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 ZNF721Q8TF20 911 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 SLC44A1Q8WWI5 657 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 ATL1Q8WXF7 558 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 PYCR2Q96C36 320 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 INTS12Q96CB8 462 aaKnown RBP4.37□□□□□ -1.71
ATXN3-229ENST00000554672 ZBED6CLQ96FA7 236 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-229ENST00000554672 RBM18Q96H35 190 aaKnown RBP4.37□□□□□ -1.71
ATXN3-229ENST00000554672 SENP5Q96HI0 755 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-229ENST00000554672 GPR21Q99679 349 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 AIF1LQ9BQI0 150 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 SLC39A3Q9BRY0 314 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 SOX7Q9BT81 388 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 MED18Q9BUE0 208 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 C19orf24Q9BVV8 132 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 BEX2Q9BXY8 128 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 TRIM54Q9BYV2 358 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 FRMD8P1Q9BZ68 369 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-229ENST00000554672 TSGA10Q9BZW7 698 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 PITHD1Q9GZP4 211 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-229ENST00000554672 PELI2Q9HAT8 420 aa4.37□□□□□ -1.71
ATXN3-229ENST00000554672 LRTM1Q9HBL6 345 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms