RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 CRYZQ08257 329 aaKnown RBP13.27□□□□□ -0.28
VTI1B-204ENST00000554659 UBXN2BQ14CS0 331 aa13.27□□□□□ -0.28
VTI1B-204ENST00000554659 CDNFQ49AH0 187 aa13.27□□□□□ -0.28
VTI1B-204ENST00000554659 PAAF1Q9BRP4 392 aa13.27□□□□□ -0.28
VTI1B-204ENST00000554659 KRBA1A5PL33 1030 aa13.27□□□□□ -0.28
VTI1B-204ENST00000554659 LYRM1O43325 122 aa13.27□□□□□ -0.28
VTI1B-204ENST00000554659 ERCC1P07992 297 aaPredicted RBP13.27□□□□□ -0.28
VTI1B-204ENST00000554659 PFKMP08237 780 aa13.27□□□□□ -0.28
VTI1B-204ENST00000554659 CA5AP35218 305 aa13.27□□□□□ -0.28
VTI1B-204ENST00000554659 CLRN1P58418 232 aa13.27□□□□□ -0.28
VTI1B-204ENST00000554659 GPAT4Q86UL3 456 aa13.27□□□□□ -0.28
VTI1B-204ENST00000554659 NAGSQ8N159 534 aa13.27□□□□□ -0.28
VTI1B-204ENST00000554659 JPH3Q8WXH2 748 aaPredicted RBP13.27□□□□□ -0.28
VTI1B-204ENST00000554659 DPH7Q9BTV6 452 aa13.27□□□□□ -0.28
VTI1B-204ENST00000554659 A0A1B0GV50 99 aa13.27□□□□□ -0.29
VTI1B-204ENST00000554659 SOX9P48436 509 aa13.27□□□□□ -0.29
VTI1B-204ENST00000554659 PRKXP51817 358 aa13.27□□□□□ -0.29
VTI1B-204ENST00000554659 VSX2P58304 361 aaPredicted RBP13.27□□□□□ -0.29
VTI1B-204ENST00000554659 DEFB134Q4QY38 66 aa13.27□□□□□ -0.29
VTI1B-204ENST00000554659 KIAA0319Q5VV43 1072 aa13.27□□□□□ -0.29
VTI1B-204ENST00000554659 CNTN4Q8IWV2 1026 aa13.27□□□□□ -0.29
VTI1B-204ENST00000554659 LAS2Q8IYD9 372 aa13.27□□□□□ -0.29
VTI1B-204ENST00000554659 CBARPQ8N350 705 aaPredicted RBP13.27□□□□□ -0.29
VTI1B-204ENST00000554659 ZNF283Q8N7M2 679 aa13.27□□□□□ -0.29
VTI1B-204ENST00000554659 TMEM174Q8WUU8 243 aa13.27□□□□□ -0.29
VTI1B-204ENST00000554659 SSX3Q99909 188 aa13.27□□□□□ -0.29
VTI1B-204ENST00000554659 KCNK12Q9HB15 430 aa13.27□□□□□ -0.29
VTI1B-204ENST00000554659 MRPL15Q9P015 296 aaKnown RBP13.27□□□□□ -0.29
VTI1B-204ENST00000554659 NUFIP1Q9UHK0 495 aaKnown RBP13.27□□□□□ -0.29
VTI1B-204ENST00000554659 SPO11Q9Y5K1 396 aa13.27□□□□□ -0.29
VTI1B-204ENST00000554659 A0A1W2PPL8 197 aa13.27□□□□□ -0.29
VTI1B-204ENST00000554659 HCRTR2O43614 444 aa13.27□□□□□ -0.29
VTI1B-204ENST00000554659 CDK4P11802 303 aa13.27□□□□□ -0.29
VTI1B-204ENST00000554659 PRKCAP17252 672 aa13.27□□□□□ -0.29
VTI1B-204ENST00000554659 ELAVL3Q14576 367 aaKnown RBP13.27□□□□□ -0.29
VTI1B-204ENST00000554659 TMEM156Q8N614 296 aa13.27□□□□□ -0.29
VTI1B-204ENST00000554659 FAM46AQ96IP4 442 aaKnown RBP13.27□□□□□ -0.29
VTI1B-204ENST00000554659 URM1Q9BTM9 101 aaKnown RBP13.27□□□□□ -0.29
VTI1B-204ENST00000554659 RDH14Q9HBH5 336 aa13.27□□□□□ -0.29
VTI1B-204ENST00000554659 WDR6Q9NNW5 1121 aaKnown RBP13.27□□□□□ -0.29
VTI1B-204ENST00000554659 TREX1Q9NSU2 369 aa13.27□□□□□ -0.29
VTI1B-204ENST00000554659 CLEC4EQ9ULY5 219 aa13.27□□□□□ -0.29
VTI1B-204ENST00000554659 B3GNT3Q9Y2A9 372 aa13.27□□□□□ -0.29
VTI1B-204ENST00000554659 C11orf98E9PRG8 122 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 K7ERQ8 282 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 M0QZQ0 153 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 TYRP1P17643 537 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 CDKN2CP42773 168 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 CXCR4P61073 352 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 RASGRP3Q8IV61 690 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 SYT14Q8NB59 555 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 OR14K1Q8NGZ2 314 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 ADAMTS19Q8TE59 1207 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 KLHL15Q96M94 604 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 PELI2Q9HAT8 420 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 EEF1E1-BLOC1S5C9J1V9 151 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 RNASET2O00584 256 aaKnown RBP13.26□□□□□ -0.29
VTI1B-204ENST00000554659 IL4RP24394 825 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 GGT2P36268 569 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 PLAG1Q6DJT9 500 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 CRTC1Q6UUV9 634 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 HMGN2P46Q86SG4 172 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 ZNF611Q8N823 705 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 PROKR1Q8TCW9 393 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 ZNF300Q96RE9 604 aaPredicted RBP13.26□□□□□ -0.29
VTI1B-204ENST00000554659 GPR45Q9Y5Y3 372 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 HMX3A6NHT5 357 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 RTCAO00442 366 aaKnown RBP13.26□□□□□ -0.29
VTI1B-204ENST00000554659 GPR157Q5UAW9 335 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 ANKRD54Q6NXT1 300 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 DEDD2Q8WXF8 326 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 MMABQ96EY8 250 aaPredicted RBP13.26□□□□□ -0.29
VTI1B-204ENST00000554659 TMEM121BQ9BXQ6 578 aaPredicted RBP13.26□□□□□ -0.29
VTI1B-204ENST00000554659 HEBP1Q9NRV9 189 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 VAPAQ9P0L0 249 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 KLHL9Q9P2J3 617 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 FEZF1A0PJY2 475 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 WASH4PA8MWX3 477 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 SSX4O60224 188 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 RAD51DO75771 328 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 PAK4O96013 591 aaPredicted RBP13.26□□□□□ -0.29
VTI1B-204ENST00000554659 APOFQ13790 326 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 ELP2Q6IA86 826 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 TMEM205Q6UW68 189 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 P4HA3Q7Z4N8 544 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 WDR92Q96MX6 357 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 MTHFD2LQ9H903 347 aaPredicted RBP13.26□□□□□ -0.29
VTI1B-204ENST00000554659 TRAPPC13A5PLN9 417 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 OR5K4A6NMS3 321 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 FAM189BP81408 668 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 ZNF791Q3KP31 576 aaPredicted RBP13.26□□□□□ -0.29
VTI1B-204ENST00000554659 SFRP4Q6FHJ7 346 aaPredicted RBP13.26□□□□□ -0.29
VTI1B-204ENST00000554659 PLBD1Q6P4A8 553 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 COMMD7Q86VX2 200 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 APCDD1Q8J025 514 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 FTMTQ8N4E7 242 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 ANKK1Q8NFD2 765 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 OR9Q2Q8NGE9 314 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 LMX1AQ8TE12 382 aa13.26□□□□□ -0.29
VTI1B-204ENST00000554659 FZD3Q9NPG1 666 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms