RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 SLC35A5Q9BS91 424 aa18.65■□□□□ 0.58
CTDSP2-204ENST00000548823 OSBPL11Q9BXB4 747 aa18.65■□□□□ 0.58
CTDSP2-204ENST00000548823 TMEM38AQ9H6F2 299 aa18.65■□□□□ 0.58
CTDSP2-204ENST00000548823 EPS8L2Q9H6S3 715 aa18.65■□□□□ 0.58
CTDSP2-204ENST00000548823 ZNF552Q9H707 407 aaPredicted RBP18.65■□□□□ 0.58
CTDSP2-204ENST00000548823 LYARQ9NX58 379 aaKnown RBP18.65■□□□□ 0.58
CTDSP2-204ENST00000548823 MAGEA13PA6NCF6 341 aa18.64■□□□□ 0.57
CTDSP2-204ENST00000548823 OR6C74A6NCV1 312 aa18.64■□□□□ 0.57
CTDSP2-204ENST00000548823 PDPK1O15530 556 aa18.64■□□□□ 0.57
CTDSP2-204ENST00000548823 ERI3O43414 337 aaKnown RBP18.64■□□□□ 0.57
CTDSP2-204ENST00000548823 SERPIND1P05546 499 aa18.64■□□□□ 0.57
CTDSP2-204ENST00000548823 KDELR2P33947 212 aa18.64■□□□□ 0.57
CTDSP2-204ENST00000548823 PCGF2P35227 344 aa18.64■□□□□ 0.57
CTDSP2-204ENST00000548823 MAGEA8P43361 318 aa18.64■□□□□ 0.57
CTDSP2-204ENST00000548823 BLMHQ13867 455 aa18.64■□□□□ 0.57
CTDSP2-204ENST00000548823 FBXO42Q6P3S6 717 aa18.64■□□□□ 0.57
CTDSP2-204ENST00000548823 MYO7BQ6PIF6 2116 aa18.64■□□□□ 0.57
CTDSP2-204ENST00000548823 SPESP1Q6UW49 350 aa18.64■□□□□ 0.57
CTDSP2-204ENST00000548823 ZNF793Q6ZN11 406 aa18.64■□□□□ 0.57
CTDSP2-204ENST00000548823 VN1R4Q7Z5H5 301 aa18.64■□□□□ 0.57
CTDSP2-204ENST00000548823 ASPGQ86U10 573 aa18.64■□□□□ 0.57
CTDSP2-204ENST00000548823 SLC30A8Q8IWU4 369 aa18.64■□□□□ 0.57
CTDSP2-204ENST00000548823 C11orf65Q8NCR3 313 aa18.64■□□□□ 0.57
CTDSP2-204ENST00000548823 ZNF501Q96CX3 271 aaPredicted RBP18.64■□□□□ 0.57
CTDSP2-204ENST00000548823 ZBED6CLQ96FA7 236 aaPredicted RBP18.64■□□□□ 0.57
CTDSP2-204ENST00000548823 PYURFQ96I23 114 aa18.64■□□□□ 0.57
CTDSP2-204ENST00000548823 OR2A5Q96R48 311 aa18.64■□□□□ 0.57
CTDSP2-204ENST00000548823 MAP3K3Q99759 626 aa18.64■□□□□ 0.57
CTDSP2-204ENST00000548823 C17orf62Q9BQA9 187 aa18.64■□□□□ 0.57
CTDSP2-204ENST00000548823 KLHL31Q9H511 634 aa18.64■□□□□ 0.57
CTDSP2-204ENST00000548823 CHST11Q9NPF2 352 aa18.64■□□□□ 0.57
CTDSP2-204ENST00000548823 DNAJB9Q9UBS3 223 aa18.64■□□□□ 0.57
CTDSP2-204ENST00000548823 ASB4Q9Y574 426 aa18.64■□□□□ 0.57
CTDSP2-204ENST00000548823 A0A0J9YY10 115 aa18.63■□□□□ 0.57
CTDSP2-204ENST00000548823 URADA6NGE7 173 aa18.63■□□□□ 0.57
CTDSP2-204ENST00000548823 ACOX3O15254 700 aa18.63■□□□□ 0.57
CTDSP2-204ENST00000548823 TPST1O60507 370 aa18.63■□□□□ 0.57
CTDSP2-204ENST00000548823 TNFRSF21O75509 655 aa18.63■□□□□ 0.57
CTDSP2-204ENST00000548823 PRKD3O94806 890 aa18.63■□□□□ 0.57
CTDSP2-204ENST00000548823 SERPINA1P01009 418 aa18.63■□□□□ 0.57
CTDSP2-204ENST00000548823 SMIM10L1P0DMW3 83 aa18.63■□□□□ 0.57
CTDSP2-204ENST00000548823 POLR2CP19387 275 aaPredicted RBP18.63■□□□□ 0.57
CTDSP2-204ENST00000548823 EFNA1P20827 205 aaPredicted RBP18.63■□□□□ 0.57
CTDSP2-204ENST00000548823 PLA2G16P53816 162 aa18.63■□□□□ 0.57
CTDSP2-204ENST00000548823 FCRL6Q6DN72 434 aa18.63■□□□□ 0.57
CTDSP2-204ENST00000548823 ENPP6Q6UWR7 440 aa18.63■□□□□ 0.57
CTDSP2-204ENST00000548823 EPHX4Q8IUS5 362 aa18.63■□□□□ 0.57
CTDSP2-204ENST00000548823 GALNT16Q8N428 558 aa18.63■□□□□ 0.57
CTDSP2-204ENST00000548823 GALNT4Q8N4A0 578 aa18.63■□□□□ 0.57
CTDSP2-204ENST00000548823 ACOT4Q8N9L9 421 aa18.63■□□□□ 0.57
CTDSP2-204ENST00000548823 CLEC1AQ8NC01 280 aa18.63■□□□□ 0.57
CTDSP2-204ENST00000548823 FBXO30Q8TB52 745 aa18.63■□□□□ 0.57
CTDSP2-204ENST00000548823 TBC1D20Q96BZ9 403 aa18.63■□□□□ 0.57
CTDSP2-204ENST00000548823 SMIM10Q96HG1 83 aa18.63■□□□□ 0.57
CTDSP2-204ENST00000548823 FER1L6-AS2Q96M78 137 aa18.63■□□□□ 0.57
CTDSP2-204ENST00000548823 IP6K3Q96PC2 410 aa18.63■□□□□ 0.57
CTDSP2-204ENST00000548823 SLC29A1Q99808 456 aa18.63■□□□□ 0.57
CTDSP2-204ENST00000548823 PRDM9Q9NQV7 894 aa18.63■□□□□ 0.57
CTDSP2-204ENST00000548823 AP4B1Q9Y6B7 739 aa18.63■□□□□ 0.57
CTDSP2-204ENST00000548823 SEC16AO15027 2179 aa18.63■□□□□ 0.57
CTDSP2-204ENST00000548823 SPTBP11277 2137 aa18.62■□□□□ 0.57
CTDSP2-204ENST00000548823 RASAL1O95294 804 aa18.62■□□□□ 0.57
CTDSP2-204ENST00000548823 SLC35G6P0C7Q6 338 aa18.62■□□□□ 0.57
CTDSP2-204ENST00000548823 COX6B1P14854 86 aa18.62■□□□□ 0.57
CTDSP2-204ENST00000548823 MAGEA2P43356 314 aa18.62■□□□□ 0.57
CTDSP2-204ENST00000548823 GPR19Q15760 415 aa18.62■□□□□ 0.57
CTDSP2-204ENST00000548823 KLHL35Q6PF15 583 aa18.62■□□□□ 0.57
CTDSP2-204ENST00000548823 FAM198BQ6UWH4 519 aa18.62■□□□□ 0.57
CTDSP2-204ENST00000548823 CBLL1Q75N03 491 aa18.62■□□□□ 0.57
CTDSP2-204ENST00000548823 EIF3MQ7L2H7 374 aaKnown RBP18.62■□□□□ 0.57
CTDSP2-204ENST00000548823 OOSP2Q86WS3 158 aa18.62■□□□□ 0.57
CTDSP2-204ENST00000548823 CAMKVQ8NCB2 501 aa18.62■□□□□ 0.57
CTDSP2-204ENST00000548823 GRHL3Q8TE85 626 aa18.62■□□□□ 0.57
CTDSP2-204ENST00000548823 FAR1Q8WVX9 515 aa18.62■□□□□ 0.57
CTDSP2-204ENST00000548823 CD180Q99467 661 aa18.62■□□□□ 0.57
CTDSP2-204ENST00000548823 C1GALT1Q9NS00 363 aa18.62■□□□□ 0.57
CTDSP2-204ENST00000548823 GPATCH2Q9NW75 528 aa18.62■□□□□ 0.57
CTDSP2-204ENST00000548823 TEX10Q9NXF1 929 aaPredicted RBP18.62■□□□□ 0.57
CTDSP2-204ENST00000548823 GSAPA4D1B5 854 aa18.61■□□□□ 0.57
CTDSP2-204ENST00000548823 C7orf72A4D263 438 aa18.61■□□□□ 0.57
CTDSP2-204ENST00000548823 TLCD2A6NGC4 264 aa18.61■□□□□ 0.57
CTDSP2-204ENST00000548823 C4orf51C9J302 202 aa18.61■□□□□ 0.57
CTDSP2-204ENST00000548823 SOCS2O14508 198 aa18.61■□□□□ 0.57
CTDSP2-204ENST00000548823 MAGP20916 626 aa18.61■□□□□ 0.57
CTDSP2-204ENST00000548823 RORAP35398 523 aa18.61■□□□□ 0.57
CTDSP2-204ENST00000548823 MANFP55145 182 aaKnown RBP18.61■□□□□ 0.57
CTDSP2-204ENST00000548823 SLAMF1Q13291 335 aa18.61■□□□□ 0.57
CTDSP2-204ENST00000548823 NKG7Q16617 165 aa18.61■□□□□ 0.57
CTDSP2-204ENST00000548823 ZNF630Q2M218 657 aaPredicted RBP18.61■□□□□ 0.57
CTDSP2-204ENST00000548823 GCNT6Q5T4J0 391 aa18.61■□□□□ 0.57
CTDSP2-204ENST00000548823 NDUFAF5Q5TEU4 345 aa18.61■□□□□ 0.57
CTDSP2-204ENST00000548823 SAXO2Q658L1 398 aa18.61■□□□□ 0.57
CTDSP2-204ENST00000548823 CCDC80Q76M96 950 aa18.61■□□□□ 0.57
CTDSP2-204ENST00000548823 RNF44Q7L0R7 432 aa18.61■□□□□ 0.57
CTDSP2-204ENST00000548823 MMP21Q8N119 569 aa18.61■□□□□ 0.57
CTDSP2-204ENST00000548823 FAM86B1Q8N7N1 296 aa18.61■□□□□ 0.57
CTDSP2-204ENST00000548823 AMER3Q8N944 861 aa18.61■□□□□ 0.57
CTDSP2-204ENST00000548823 ZFP28Q8NHY6 868 aa18.61■□□□□ 0.57
CTDSP2-204ENST00000548823 RELTQ969Z4 430 aa18.61■□□□□ 0.57
CTDSP2-204ENST00000548823 NEURL3Q96EH8 262 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms