RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 SYPL1Q16563 259 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 NTRK2Q16620 822 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 ZNF791Q3KP31 576 aaPredicted RBP13.38□□□□□ -0.27
SRP54-202ENST00000546080 Q6ZVL8 140 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 KRT74Q7RTS7 529 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 PRICKLE2Q7Z3G6 844 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 COMTD1Q86VU5 262 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 RASGEF1AQ8N9B8 481 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 MORN4Q8NDC4 146 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 OR4F15Q8NGB8 312 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 OR11H4Q8NGC9 324 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 SPRYD4Q8WW59 207 aaPredicted RBP13.38□□□□□ -0.27
SRP54-202ENST00000546080 SLC5A11Q8WWX8 675 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 TRMT2BQ96GJ1 504 aaKnown RBP13.38□□□□□ -0.27
SRP54-202ENST00000546080 SECISBP2Q96T21 854 aaKnown RBP13.38□□□□□ -0.27
SRP54-202ENST00000546080 TREX2Q9BQ50 279 aaPredicted RBP13.38□□□□□ -0.27
SRP54-202ENST00000546080 CPEB1Q9BZB8 566 aaKnown RBP13.38□□□□□ -0.27
SRP54-202ENST00000546080 BTBD1Q9H0C5 482 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 DPAGT1Q9H3H5 408 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 GHITMQ9H3K2 345 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 HEXA-AS1Q9H8Q6 139 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 MAN2C1Q9NTJ4 1040 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 ASB6Q9NWX5 421 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 SLCO1C1Q9NYB5 712 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 ZNF224Q9NZL3 707 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 PCDH10Q9P2E7 1040 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 P2RX2Q9UBL9 471 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 LSM7Q9UK45 103 aaKnown RBP13.38□□□□□ -0.27
SRP54-202ENST00000546080 ETV3P41162 512 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 ZNF155Q12901 538 aaPredicted RBP13.38□□□□□ -0.27
SRP54-202ENST00000546080 FGFBP1Q14512 234 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 CD276Q5ZPR3 534 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 GPR139Q6DWJ6 353 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 TMEM65Q6PI78 240 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 NXPE4Q6UWF7 544 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 SZRD1Q7Z422 152 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 TBC1D19Q8N5T2 526 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 TRAM1L1Q8N609 369 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 ZNF366Q8N895 744 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 DTX3Q8N9I9 347 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 POGLUT1Q8NBL1 392 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 ZNF740Q8NDX6 193 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 OR6C4Q8NGE1 309 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 SMPDL3AQ92484 453 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 MRPS31Q92665 395 aaKnown RBP13.38□□□□□ -0.27
SRP54-202ENST00000546080 RFKQ969G6 155 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 DPCDQ9BVM2 203 aaPredicted RBP13.38□□□□□ -0.27
SRP54-202ENST00000546080 RIOK2Q9BVS4 552 aaKnown RBP13.38□□□□□ -0.27
SRP54-202ENST00000546080 LINC00597Q9H2U6 94 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 OR51J1Q9H342 316 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 C11orf49Q9H6J7 331 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 CYSLTR2Q9NS75 346 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 EVA1BQ9NVM1 165 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 PTGFRNQ9P2B2 879 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 CBLCQ9ULV8 474 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 ZFR2Q9UPR6 939 aaKnown RBP13.38□□□□□ -0.27
SRP54-202ENST00000546080 EEF1E1O43324 174 aaKnown RBP13.37□□□□□ -0.27
SRP54-202ENST00000546080 B4GALT2O60909 372 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 POP4O95707 220 aaKnown RBP13.37□□□□□ -0.27
SRP54-202ENST00000546080 URODP06132 367 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 NR2F1P10589 423 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 BTCP35070 178 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 NNMTP40261 264 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 DCDC1P59894 354 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 POLR2LP62875 67 aaKnown RBP13.37□□□□□ -0.27
SRP54-202ENST00000546080 HSF2Q03933 536 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 ACSM1Q08AH1 577 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 EXOSC2Q13868 293 aaKnown RBP13.37□□□□□ -0.27
SRP54-202ENST00000546080 AANATQ16613 207 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 ARHGAP15Q53QZ3 475 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 CLLU1Q5K131 121 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 BRAT1Q6PJG6 821 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 ADGRD2Q7Z7M1 963 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 C2orf69Q8N8R5 385 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 GALNT11Q8NCW6 608 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 OR8D4Q8NGM9 314 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 FIBINQ8TAL6 211 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 PPP1R16AQ96I34 528 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 PRRC1Q96M27 445 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 SORCS2Q96PQ0 1159 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 FAM83CQ9BQN1 747 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 OSGEPL1Q9H4B0 414 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 UCKL1Q9NWZ5 548 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 UBQLN2Q9UHD9 624 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 LRFN2Q9ULH4 789 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 RPS10-NUDT3A0A1W2PQS6 291 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 RGS9O75916 674 aaPredicted RBP13.37□□□□□ -0.27
SRP54-202ENST00000546080 TFPIP10646 304 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 CTRB1P17538 263 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 AHCYP23526 432 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 RBMS1P29558 406 aaKnown RBP13.37□□□□□ -0.27
SRP54-202ENST00000546080 PPP2R1BP30154 601 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 VIPR1P32241 457 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 ACSL1P33121 698 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 SOX9P48436 509 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 PITPNBP48739 271 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 PRLHRP49683 370 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 ZNF81P51508 661 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 MAP4K2Q12851 820 aa13.37□□□□□ -0.27
SRP54-202ENST00000546080 MFSD13AQ14CX5 517 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms