RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 FXYD1O00168 92 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 PLOD2O00469 737 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 NR5A2O00482 541 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 RFXANKO14593 260 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 SMAD7O15105 426 aaKnown RBP6.13□□□□□ -1.43
CDCA3-209ENST00000544610 P2RX6O15547 441 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 FOXS1O43638 330 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 CTNSO60931 367 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 BCAS2O75934 225 aaPredicted RBP6.13□□□□□ -1.43
CDCA3-209ENST00000544610 ATP1B1P05026 303 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 SERPIND1P05546 499 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 GUSBP08236 651 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 IL3P08700 152 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 BMP2P12643 396 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 GPX2P18283 190 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 CSNK2A2P19784 350 aaPredicted RBP6.13□□□□□ -1.43
CDCA3-209ENST00000544610 SLC6A2P23975 617 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 PTPN6P29350 595 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 NTSP30990 170 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 NUDT2P50583 147 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 ANXA11P50995 505 aaKnown RBP6.13□□□□□ -1.43
CDCA3-209ENST00000544610 TDGF1P3P51864 188 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 LIM2P55344 173 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 HNRNPH2P55795 449 aaKnown RBP6.13□□□□□ -1.43
CDCA3-209ENST00000544610 WNT3P56703 355 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 CORO7P57737 925 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 IGLV3-21P80748 117 aaPredicted RBP6.13□□□□□ -1.43
CDCA3-209ENST00000544610 DMTNQ08495 405 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 Q0VFX4 171 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 TRAP1Q12931 704 aaKnown RBP6.13□□□□□ -1.43
CDCA3-209ENST00000544610 BNIP2Q12982 314 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 MFAP5Q13361 173 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 HKDC1Q2TB90 917 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 TIGD2Q4W5G0 525 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 PIGGQ5H8A4 983 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 MTX3Q5HYI7 312 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 ZNF324BQ6AW86 544 aaPredicted RBP6.13□□□□□ -1.43
CDCA3-209ENST00000544610 SP5Q6BEB4 398 aaPredicted RBP6.13□□□□□ -1.43
CDCA3-209ENST00000544610 ERICH5Q6P6B1 374 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 ZCCHC12Q6PEW1 402 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 FAM180AQ6UWF9 173 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 ISLR2Q6UXK2 745 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 QSOX2Q6ZRP7 698 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 GK5Q6ZS86 529 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 SHISA6Q6ZSJ9 500 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 DHDDSQ86SQ9 333 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 SERPINA11Q86U17 422 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 SLC30A8Q8IWU4 369 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 FAM20CQ8IXL6 584 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 RNF175Q8N4F7 328 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 BCORP1Q8N888 145 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 OR11G2Q8NGC1 345 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 MIPOL1Q8TD10 442 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 SFXN5Q8TD22 340 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 ZNF675Q8TD23 568 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.13□□□□□ -1.43
CDCA3-209ENST00000544610 OIT3Q8WWZ8 545 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 PMM1Q92871 262 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 RELTQ969Z4 430 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 MCUR1Q96AQ8 359 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 TBC1D20Q96BZ9 403 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 RCN3Q96D15 328 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 THOC3Q96J01 351 aaKnown RBP6.13□□□□□ -1.43
CDCA3-209ENST00000544610 VPS50Q96JG6 964 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 ZNF681Q96N22 645 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 ANKRD27Q96NW4 1050 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 CGREF1Q99674 301 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 KLHL31Q9H511 634 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 SOX17Q9H6I2 414 aaPredicted RBP6.13□□□□□ -1.43
CDCA3-209ENST00000544610 RPF2Q9H7B2 306 aaKnown RBP6.13□□□□□ -1.43
CDCA3-209ENST00000544610 BRD7Q9NPI1 651 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 MKKSQ9NPJ1 570 aaPredicted RBP6.13□□□□□ -1.43
CDCA3-209ENST00000544610 SEMA3GQ9NS98 782 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 CUTCQ9NTM9 273 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 OLAHQ9NV23 265 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 C14orf105Q9NVL8 296 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 GIN1Q9NXP7 522 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 SUCOQ9UBS9 1254 aaKnown RBP6.13□□□□□ -1.43
CDCA3-209ENST00000544610 GIMAP2Q9UG22 337 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 BAIAP2L1Q9UHR4 511 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 KLHL20Q9Y2M5 609 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 ATG4BQ9Y4P1 393 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 ZNF780BQ9Y6R6 833 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 FER1L5A0AVI2 2057 aa6.13□□□□□ -1.43
CDCA3-209ENST00000544610 A0A1W2PQ72 361 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 A0A1W2PRB8 838 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 ASPDHA6ND91 283 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 EVPLLA8MZ36 301 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 AIM2O14862 343 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 PDPK1O15530 556 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 ASNA1O43681 348 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 PLOD3O60568 738 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 JRKO75564 520 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 KRT75O95678 551 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 GPR75O95800 540 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 AIFM1O95831 613 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 AGR2O95994 175 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 HPP00738 406 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 IGHA1P01876 353 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 EIF2S1P05198 315 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms