RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 MRPL19P49406 292 aaKnown RBP17.6■□□□□ 0.41
DDX55-211ENST00000544429 IDH3AP50213 366 aa17.6■□□□□ 0.41
DDX55-211ENST00000544429 NRG3P56975 720 aa17.6■□□□□ 0.41
DDX55-211ENST00000544429 CORO7P57737 925 aa17.6■□□□□ 0.41
DDX55-211ENST00000544429 PSPHP78330 225 aa17.6■□□□□ 0.41
DDX55-211ENST00000544429 SRSF11Q05519 484 aaKnown RBP17.6■□□□□ 0.41
DDX55-211ENST00000544429 RPS6KA2Q15349 733 aa17.6■□□□□ 0.41
DDX55-211ENST00000544429 DPY19L1Q2PZI1 675 aa17.6■□□□□ 0.41
DDX55-211ENST00000544429 TMEM64Q6YI46 380 aa17.6■□□□□ 0.41
DDX55-211ENST00000544429 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.6■□□□□ 0.41
DDX55-211ENST00000544429 SIAH3Q8IW03 269 aa17.6■□□□□ 0.41
DDX55-211ENST00000544429 OR10G3Q8NGC4 313 aa17.6■□□□□ 0.41
DDX55-211ENST00000544429 NR4A3Q92570 626 aa17.6■□□□□ 0.41
DDX55-211ENST00000544429 SECISBP2Q96T21 854 aaKnown RBP17.6■□□□□ 0.41
DDX55-211ENST00000544429 LMF2Q9BU23 707 aaKnown RBP17.6■□□□□ 0.41
DDX55-211ENST00000544429 SDR39U1Q9NRG7 319 aaPredicted RBP17.6■□□□□ 0.41
DDX55-211ENST00000544429 CNOT11Q9UKZ1 510 aaKnown RBP17.6■□□□□ 0.41
DDX55-211ENST00000544429 GCN1Q92616 2671 aaKnown RBP17.6■□□□□ 0.41
DDX55-211ENST00000544429 ESPL1Q14674 2120 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 A0A0G2JMM0 328 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 A0A1W2PPB8 328 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 A0A1W2PRS3 328 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 ANKRD33BA6NCL7 494 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 KIR3DP1A8MWS1 328 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 TCP11X1B4DZS4 312 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 KLRC4-KLRK1H3BQV0 150 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 RNASET2O00584 256 aaKnown RBP17.59■□□□□ 0.41
DDX55-211ENST00000544429 PEX1O43933 1283 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 DIAPH2O60879 1101 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 PPM1BO75688 479 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 CBX6O95503 412 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 CRYABP02511 175 aaKnown RBP17.59■□□□□ 0.41
DDX55-211ENST00000544429 ABCB1P08183 1280 aaPredicted RBP17.59■□□□□ 0.41
DDX55-211ENST00000544429 IDO1P14902 403 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 CNR1P21554 472 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 MST1P26927 711 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 ZFP36L2P47974 494 aaKnown RBP17.59■□□□□ 0.41
DDX55-211ENST00000544429 TMED10P49755 219 aaKnown RBP17.59■□□□□ 0.41
DDX55-211ENST00000544429 CLNS1AP54105 237 aaKnown RBP17.59■□□□□ 0.41
DDX55-211ENST00000544429 UFM1P61960 85 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 FOXO1Q12778 655 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 NNATQ16517 81 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 GSTA3Q16772 222 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 PDCD4Q53EL6 469 aaKnown RBP17.59■□□□□ 0.41
DDX55-211ENST00000544429 RNFT1Q5M7Z0 435 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 SLC22A10Q63ZE4 541 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 TMEM198Q66K66 360 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 OR4F3Q6IEY1 312 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 TMEM81Q6P7N7 255 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 FBXW8Q8N3Y1 598 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 CPSF7Q8N684 471 aaKnown RBP17.59■□□□□ 0.41
DDX55-211ENST00000544429 POGLUT1Q8NBL1 392 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 RNF138Q8WVD3 245 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 HGDQ93099 445 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 FAM120BQ96EK7 910 aaKnown RBP17.59■□□□□ 0.41
DDX55-211ENST00000544429 EBF4Q9BQW3 602 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 CCDC134Q9H6E4 229 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 NEUROD4Q9HD90 331 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 SACM1LQ9NTJ5 587 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 OLAHQ9NV23 265 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 CNIH4Q9P003 139 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 MYO18BQ8IUG5 2567 aa17.59■□□□□ 0.41
DDX55-211ENST00000544429 PINLYPA6NC86 204 aa17.58■□□□□ 0.4
DDX55-211ENST00000544429 CAPN14A8MX76 684 aa17.58■□□□□ 0.4
DDX55-211ENST00000544429 E9PBE3 544 aa17.58■□□□□ 0.4
DDX55-211ENST00000544429 EMC8O43402 210 aa17.58■□□□□ 0.4
DDX55-211ENST00000544429 TSPAN2O60636 221 aa17.58■□□□□ 0.4
DDX55-211ENST00000544429 WISP2O76076 250 aa17.58■□□□□ 0.4
DDX55-211ENST00000544429 C6orf47O95873 294 aa17.58■□□□□ 0.4
DDX55-211ENST00000544429 EDN3P14138 238 aa17.58■□□□□ 0.4
DDX55-211ENST00000544429 GPC1P35052 558 aa17.58■□□□□ 0.4
DDX55-211ENST00000544429 KIR3DL1P43629 444 aa17.58■□□□□ 0.4
DDX55-211ENST00000544429 MEOX1P50221 254 aa17.58■□□□□ 0.4
DDX55-211ENST00000544429 FBXW4P57775 412 aa17.58■□□□□ 0.4
DDX55-211ENST00000544429 HBA1P69905 142 aa17.58■□□□□ 0.4
DDX55-211ENST00000544429 SPANXN4Q5MJ08 99 aa17.58■□□□□ 0.4
DDX55-211ENST00000544429 SLC34A3Q8N130 599 aa17.58■□□□□ 0.4
DDX55-211ENST00000544429 FAM98AQ8NCA5 519 aaKnown RBP17.58■□□□□ 0.4
DDX55-211ENST00000544429 OR2M7Q8NG81 312 aa17.58■□□□□ 0.4
DDX55-211ENST00000544429 SPPL2AQ8TCT8 520 aa17.58■□□□□ 0.4
DDX55-211ENST00000544429 OMA1Q96E52 524 aa17.58■□□□□ 0.4
DDX55-211ENST00000544429 SLC35A4Q96G79 324 aa17.58■□□□□ 0.4
DDX55-211ENST00000544429 MS4A4EQ96PG1 132 aa17.58■□□□□ 0.4
DDX55-211ENST00000544429 CCDC28BQ9BUN5 200 aa17.58■□□□□ 0.4
DDX55-211ENST00000544429 CXorf36Q9H7Y0 433 aa17.58■□□□□ 0.4
DDX55-211ENST00000544429 TCF7L2Q9NQB0 619 aa17.58■□□□□ 0.4
DDX55-211ENST00000544429 TENM4Q6N022 2769 aa17.57■□□□□ 0.4
DDX55-211ENST00000544429 HIVEP3Q5T1R4 2406 aa17.57■□□□□ 0.4
DDX55-211ENST00000544429 OR6C70A6NIJ9 312 aa17.57■□□□□ 0.4
DDX55-211ENST00000544429 TTC36A6NLP5 189 aa17.57■□□□□ 0.4
DDX55-211ENST00000544429 PYCARD-AS1I3L0S3 204 aa17.57■□□□□ 0.4
DDX55-211ENST00000544429 GLSO94925 669 aaPredicted RBP17.57■□□□□ 0.4
DDX55-211ENST00000544429 AQP5P55064 265 aa17.57■□□□□ 0.4
DDX55-211ENST00000544429 GPR85P60893 370 aa17.57■□□□□ 0.4
DDX55-211ENST00000544429 HYAL4Q2M3T9 481 aa17.57■□□□□ 0.4
DDX55-211ENST00000544429 PGS1Q32NB8 556 aa17.57■□□□□ 0.4
DDX55-211ENST00000544429 NXNQ6DKJ4 435 aa17.57■□□□□ 0.4
DDX55-211ENST00000544429 MFSD12Q6NUT3 480 aa17.57■□□□□ 0.4
DDX55-211ENST00000544429 ZCCHC12Q6PEW1 402 aa17.57■□□□□ 0.4
DDX55-211ENST00000544429 PRR22Q8IZ63 422 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms