RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 FAM173AQ9BQD7 235 aa16.48■□□□□ 0.23
TSFM-208ENST00000543727 DUSP26Q9BV47 211 aa16.48■□□□□ 0.23
TSFM-208ENST00000543727 CHCHD2Q9Y6H1 151 aaPredicted RBP16.48■□□□□ 0.23
TSFM-208ENST00000543727 OR6C70A6NIJ9 312 aa16.47■□□□□ 0.23
TSFM-208ENST00000543727 E9PBE3 544 aa16.47■□□□□ 0.23
TSFM-208ENST00000543727 ANKRD28O15084 1053 aa16.47■□□□□ 0.23
TSFM-208ENST00000543727 EMC8O43402 210 aa16.47■□□□□ 0.23
TSFM-208ENST00000543727 CT45A8P0DMV1 189 aa16.47■□□□□ 0.23
TSFM-208ENST00000543727 CT45A9P0DMV2 189 aa16.47■□□□□ 0.23
TSFM-208ENST00000543727 ZNF24P17028 368 aa16.47■□□□□ 0.23
TSFM-208ENST00000543727 KIR3DL1P43629 444 aa16.47■□□□□ 0.23
TSFM-208ENST00000543727 MEOX1P50221 254 aa16.47■□□□□ 0.23
TSFM-208ENST00000543727 TDGF1P3P51864 188 aa16.47■□□□□ 0.23
TSFM-208ENST00000543727 PLCXD2Q0VAA5 305 aa16.47■□□□□ 0.23
TSFM-208ENST00000543727 ZNF155Q12901 538 aaPredicted RBP16.47■□□□□ 0.23
TSFM-208ENST00000543727 CYP27C1Q4G0S4 372 aa16.47■□□□□ 0.23
TSFM-208ENST00000543727 KRTCAP3Q53RY4 240 aa16.47■□□□□ 0.23
TSFM-208ENST00000543727 CT45A2Q5DJT8 189 aa16.47■□□□□ 0.23
TSFM-208ENST00000543727 ANXA8L1Q5VT79 327 aa16.47■□□□□ 0.23
TSFM-208ENST00000543727 BHLHB9Q6PI77 547 aa16.47■□□□□ 0.23
TSFM-208ENST00000543727 EPGNQ6UW88 154 aa16.47■□□□□ 0.23
TSFM-208ENST00000543727 NUP54Q7Z3B4 507 aa16.47■□□□□ 0.23
TSFM-208ENST00000543727 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.47■□□□□ 0.23
TSFM-208ENST00000543727 KRTCAP2Q8N6L1 136 aa16.47■□□□□ 0.23
TSFM-208ENST00000543727 SIMC1Q8NDZ2 872 aa16.47■□□□□ 0.23
TSFM-208ENST00000543727 FAM13CQ8NE31 585 aa16.47■□□□□ 0.23
TSFM-208ENST00000543727 HOXB13Q92826 284 aaPredicted RBP16.47■□□□□ 0.23
TSFM-208ENST00000543727 LMF2Q9BU23 707 aaKnown RBP16.47■□□□□ 0.23
TSFM-208ENST00000543727 CLMPQ9H6B4 373 aa16.47■□□□□ 0.23
TSFM-208ENST00000543727 WDR55Q9H6Y2 383 aaPredicted RBP16.47■□□□□ 0.23
TSFM-208ENST00000543727 SLCO1B3Q9NPD5 702 aa16.47■□□□□ 0.23
TSFM-208ENST00000543727 MRTO4Q9UKD2 239 aaKnown RBP16.47■□□□□ 0.23
TSFM-208ENST00000543727 UBR5O95071 2799 aaPredicted RBP16.46■□□□□ 0.23
TSFM-208ENST00000543727 ACOT7O00154 380 aa16.46■□□□□ 0.23
TSFM-208ENST00000543727 CBX6O95503 412 aa16.46■□□□□ 0.23
TSFM-208ENST00000543727 ALDOCP09972 364 aaKnown RBP16.46■□□□□ 0.23
TSFM-208ENST00000543727 KRT20P35900 424 aa16.46■□□□□ 0.23
TSFM-208ENST00000543727 ST13P50502 369 aaKnown RBP16.46■□□□□ 0.23
TSFM-208ENST00000543727 ALDH6A1Q02252 535 aaKnown RBP16.46■□□□□ 0.23
TSFM-208ENST00000543727 SNTA1Q13424 505 aa16.46■□□□□ 0.23
TSFM-208ENST00000543727 EFR3AQ14156 821 aa16.46■□□□□ 0.23
TSFM-208ENST00000543727 ELOAQ14241 798 aaKnown RBP16.46■□□□□ 0.23
TSFM-208ENST00000543727 IGFBP7Q16270 282 aa16.46■□□□□ 0.23
TSFM-208ENST00000543727 NXNQ6DKJ4 435 aa16.46■□□□□ 0.23
TSFM-208ENST00000543727 FAM47EQ6ZV65 393 aa16.46■□□□□ 0.23
TSFM-208ENST00000543727 MAVSQ7Z434 540 aa16.46■□□□□ 0.23
TSFM-208ENST00000543727 CDRT4Q8N9R6 151 aa16.46■□□□□ 0.23
TSFM-208ENST00000543727 OR2M7Q8NG81 312 aa16.46■□□□□ 0.23
TSFM-208ENST00000543727 OR10G3Q8NGC4 313 aa16.46■□□□□ 0.23
TSFM-208ENST00000543727 SFXN5Q8TD22 340 aa16.46■□□□□ 0.23
TSFM-208ENST00000543727 OMA1Q96E52 524 aa16.46■□□□□ 0.23
TSFM-208ENST00000543727 SLC35A4Q96G79 324 aa16.46■□□□□ 0.23
TSFM-208ENST00000543727 CCDC28BQ9BUN5 200 aa16.46■□□□□ 0.23
TSFM-208ENST00000543727 Q9N2J8 555 aa16.46■□□□□ 0.23
TSFM-208ENST00000543727 FAM120CQ9NX05 1096 aaKnown RBP16.46■□□□□ 0.23
TSFM-208ENST00000543727 GIN1Q9NXP7 522 aa16.46■□□□□ 0.23
TSFM-208ENST00000543727 GPR45Q9Y5Y3 372 aa16.46■□□□□ 0.23
TSFM-208ENST00000543727 HELZ2Q9BYK8 2649 aaKnown RBP16.46■□□□□ 0.22
TSFM-208ENST00000543727 NUP214P35658 2090 aaPredicted RBP16.46■□□□□ 0.22
TSFM-208ENST00000543727 NBASA2RRP1 2371 aa16.45■□□□□ 0.22
TSFM-208ENST00000543727 ESPL1Q14674 2120 aa16.45■□□□□ 0.22
TSFM-208ENST00000543727 ZGRF1Q86YA3 2104 aa16.45■□□□□ 0.22
TSFM-208ENST00000543727 FASNP49327 2511 aaKnown RBP16.45■□□□□ 0.22
TSFM-208ENST00000543727 GOLGA8QA0A0J9YX86 632 aa16.45■□□□□ 0.22
TSFM-208ENST00000543727 GOLGA8OA6NCC3 632 aa16.45■□□□□ 0.22
TSFM-208ENST00000543727 GOLGA8NF8WBI6 632 aa16.45■□□□□ 0.22
TSFM-208ENST00000543727 POLR3GO15318 223 aaPredicted RBP16.45■□□□□ 0.22
TSFM-208ENST00000543727 DIAPH2O60879 1101 aa16.45■□□□□ 0.22
TSFM-208ENST00000543727 SNX4O95219 450 aa16.45■□□□□ 0.22
TSFM-208ENST00000543727 ABCB1P08183 1280 aaPredicted RBP16.45■□□□□ 0.22
TSFM-208ENST00000543727 KRT16P08779 473 aa16.45■□□□□ 0.22
TSFM-208ENST00000543727 CCL3P10147 92 aa16.45■□□□□ 0.22
TSFM-208ENST00000543727 MRPL19P49406 292 aaKnown RBP16.45■□□□□ 0.22
TSFM-208ENST00000543727 PRIM2P49643 509 aa16.45■□□□□ 0.22
TSFM-208ENST00000543727 PNLIPRP2P54317 469 aa16.45■□□□□ 0.22
TSFM-208ENST00000543727 PSMD4P55036 377 aaKnown RBP16.45■□□□□ 0.22
TSFM-208ENST00000543727 PSG6Q00889 435 aa16.45■□□□□ 0.22
TSFM-208ENST00000543727 HYAL4Q2M3T9 481 aa16.45■□□□□ 0.22
TSFM-208ENST00000543727 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.45■□□□□ 0.22
TSFM-208ENST00000543727 SLC9B1Q4ZJI4 515 aa16.45■□□□□ 0.22
TSFM-208ENST00000543727 PDCD4Q53EL6 469 aaKnown RBP16.45■□□□□ 0.22
TSFM-208ENST00000543727 SLC22A16Q86VW1 577 aa16.45■□□□□ 0.22
TSFM-208ENST00000543727 CPSF7Q8N684 471 aaKnown RBP16.45■□□□□ 0.22
TSFM-208ENST00000543727 NUP43Q8NFH3 380 aa16.45■□□□□ 0.22
TSFM-208ENST00000543727 OR56A1Q8NGH5 318 aa16.45■□□□□ 0.22
TSFM-208ENST00000543727 SPPL2AQ8TCT8 520 aa16.45■□□□□ 0.22
TSFM-208ENST00000543727 ZBTB18Q99592 522 aa16.45■□□□□ 0.22
TSFM-208ENST00000543727 ANKRA2Q9H9E1 313 aa16.45■□□□□ 0.22
TSFM-208ENST00000543727 TCF7L2Q9NQB0 619 aa16.45■□□□□ 0.22
TSFM-208ENST00000543727 SDR39U1Q9NRG7 319 aaPredicted RBP16.45■□□□□ 0.22
TSFM-208ENST00000543727 SIRT3Q9NTG7 399 aaPredicted RBP16.45■□□□□ 0.22
TSFM-208ENST00000543727 CNOT11Q9UKZ1 510 aaKnown RBP16.45■□□□□ 0.22
TSFM-208ENST00000543727 BOKQ9UMX3 212 aaPredicted RBP16.45■□□□□ 0.22
TSFM-208ENST00000543727 PCDHGB4Q9UN71 923 aa16.45■□□□□ 0.22
TSFM-208ENST00000543727 OR10H1Q9Y4A9 318 aa16.45■□□□□ 0.22
TSFM-208ENST00000543727 RP1L1Q8IWN7 2480 aaPredicted RBP16.45■□□□□ 0.22
TSFM-208ENST00000543727 SVILO95425 2214 aa16.45■□□□□ 0.22
TSFM-208ENST00000543727 PRSS51A0A1B0GVH4 220 aa16.44■□□□□ 0.22
TSFM-208ENST00000543727 ANKUB1A6NFN9 424 aa16.44■□□□□ 0.22
TSFM-208ENST00000543727 UBDO15205 165 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms