RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 SPTA1P02549 2419 aa16.22■□□□□ 0.19
CLSTN3-210ENST00000540931 TP53I11O14683 189 aa16.22■□□□□ 0.19
CLSTN3-210ENST00000540931 KCNH1O95259 989 aa16.22■□□□□ 0.19
CLSTN3-210ENST00000540931 CPSF4O95639 269 aaKnown RBP16.22■□□□□ 0.19
CLSTN3-210ENST00000540931 AK1P00568 194 aa16.22■□□□□ 0.19
CLSTN3-210ENST00000540931 HLCSP50747 726 aa16.22■□□□□ 0.19
CLSTN3-210ENST00000540931 DGKQP52824 942 aa16.22■□□□□ 0.19
CLSTN3-210ENST00000540931 TLR1Q15399 786 aa16.22■□□□□ 0.19
CLSTN3-210ENST00000540931 PRSS53Q2L4Q9 553 aa16.22■□□□□ 0.19
CLSTN3-210ENST00000540931 TIGD2Q4W5G0 525 aa16.22■□□□□ 0.19
CLSTN3-210ENST00000540931 ASB18Q6ZVZ8 466 aa16.22■□□□□ 0.19
CLSTN3-210ENST00000540931 SZRD1Q7Z422 152 aa16.22■□□□□ 0.19
CLSTN3-210ENST00000540931 KIF2BQ8N4N8 673 aa16.22■□□□□ 0.19
CLSTN3-210ENST00000540931 ADIPOR1Q96A54 375 aa16.22■□□□□ 0.19
CLSTN3-210ENST00000540931 CMTM5Q96DZ9 223 aa16.22■□□□□ 0.19
CLSTN3-210ENST00000540931 VSTM2LQ96N03 204 aa16.22■□□□□ 0.19
CLSTN3-210ENST00000540931 LRRC37BQ96QE4 947 aa16.22■□□□□ 0.19
CLSTN3-210ENST00000540931 SECISBP2Q96T21 854 aaKnown RBP16.22■□□□□ 0.19
CLSTN3-210ENST00000540931 LMF2Q9BU23 707 aaKnown RBP16.22■□□□□ 0.19
CLSTN3-210ENST00000540931 ACTRT3Q9BYD9 372 aa16.22■□□□□ 0.19
CLSTN3-210ENST00000540931 FOLH1BQ9HBA9 442 aa16.22■□□□□ 0.19
CLSTN3-210ENST00000540931 DUSP22Q9NRW4 184 aa16.22■□□□□ 0.19
CLSTN3-210ENST00000540931 GPR55Q9Y2T6 319 aaPredicted RBP16.22■□□□□ 0.19
CLSTN3-210ENST00000540931 A0A096LPI6 279 aa16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 TRAV17A0A0B4J275 112 aa16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 OR5H15A6NDH6 313 aa16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 A8MVJ9 347 aa16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 NR5A2O00482 541 aa16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 ASNA1O43681 348 aa16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 CLPSP04118 112 aa16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 ABCB1P08183 1280 aaPredicted RBP16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 ALOX5P09917 674 aa16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 SOAT1P35610 550 aa16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 CHI3L1P36222 383 aaPredicted RBP16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 CDK9P50750 372 aaKnown RBP16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 ZNF155Q12901 538 aaPredicted RBP16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 KLF10Q13118 480 aa16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 CYLC2Q14093 348 aaPredicted RBP16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 EXOSC7Q15024 291 aaKnown RBP16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 MMEL1Q495T6 779 aa16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 C6orf10Q5SRN2 563 aa16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 B3GNTL1Q67FW5 361 aaPredicted RBP16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 ZNF621Q6ZSS3 439 aa16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 FUNDC1Q8IVP5 155 aa16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 DPP10Q8N608 796 aa16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 ZNF441Q8N8Z8 693 aa16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 GOLM1Q8NBJ4 401 aa16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 CCDC197Q8NCU1 140 aa16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 OR9I1Q8NGQ6 314 aa16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 MIPOL1Q8TD10 442 aa16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 HOXB13Q92826 284 aaPredicted RBP16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 DTNBP1Q96EV8 351 aa16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 RASL10BQ96S79 203 aa16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 SH3GL1Q99961 368 aa16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 SIRT3Q9NTG7 399 aaPredicted RBP16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 EXD2Q9NVH0 621 aa16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 HPF1Q9NWY4 346 aa16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 OR10H1Q9Y4A9 318 aa16.21■□□□□ 0.19
CLSTN3-210ENST00000540931 HECTD1Q9ULT8 2610 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 RNF103-CHMP3A0A140T963 221 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 HRKO00198 91 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 NDUFAB1O14561 156 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 OR2J2O76002 312 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 CELA2AP08217 269 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 CD46P15529 392 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 PRDX6P30041 224 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 ZFP36L2P47974 494 aaKnown RBP16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 NR0B1P51843 470 aaKnown RBP16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 MNAT1P51948 309 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 PRKAG1P54619 331 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 PHC1P78364 1004 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 EFR3AQ14156 821 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 DECR1Q16698 335 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 TBCELQ5QJ74 424 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 MFSD12Q6NUT3 480 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 CDC73Q6P1J9 531 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 LINC00696Q6ZRV3 163 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 C6orf120Q7Z4R8 191 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 MTDHQ86UE4 582 aaKnown RBP16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 CLECL1Q8IZS7 167 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 SLC34A3Q8N130 599 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 ZNF321PQ8N8H1 164 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 TMEM178AQ8NBL3 297 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 ADAMTS15Q8TE58 950 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 GTF2H4Q92759 462 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 NEURL3Q96EH8 262 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 MAGED4Q96JG8 741 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 G6PC3Q9BUM1 346 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 NMUR2Q9GZQ4 415 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 CXorf36Q9H7Y0 433 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 TIMMDC1Q9NPL8 285 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 GID8Q9NWU2 228 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 ERVK-11Q9UQG0 969 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 AP3M1Q9Y2T2 418 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 NPFFR2Q9Y5X5 522 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 GMEB1Q9Y692 573 aa16.2■□□□□ 0.18
CLSTN3-210ENST00000540931 MED13Q9UHV7 2174 aa16.19■□□□□ 0.18
CLSTN3-210ENST00000540931 TMEM247A6NEH6 219 aa16.19■□□□□ 0.18
CLSTN3-210ENST00000540931 TMEM200CA6NKL6 621 aa16.19■□□□□ 0.18
CLSTN3-210ENST00000540931 WWP2O00308 870 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms