RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 GOLPH3Q9H4A6 298 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 KLHL31Q9H511 634 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 ZCCHC4Q9H5U6 513 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 ESRP2Q9H6T0 727 aaKnown RBP4.16□□□□□ -1.74
SNHG1-214ENST00000540865 BARX1Q9HBU1 254 aaPredicted RBP4.16□□□□□ -1.74
SNHG1-214ENST00000540865 ZNHIT6Q9NWK9 470 aaKnown RBP4.16□□□□□ -1.74
SNHG1-214ENST00000540865 COPS7AQ9UBW8 275 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 LAMP3Q9UQV4 416 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 CRYL1Q9Y2S2 319 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 C15orf41Q9Y2V0 281 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 SLC6A5Q9Y345 797 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 WIF1Q9Y5W5 379 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 NBEAL2Q6ZNJ1 2754 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 HEATR5BQ9P2D3 2071 aa4.15□□□□□ -1.74
SNHG1-214ENST00000540865 A0A096LNT2 108 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 A0A0G2JK05 382 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 GOLGA6L9A6NEM1 432 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 FRG2CA6NGY1 282 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 SERINC4A6NH21 518 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 BTNL10A8MVZ5 291 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 CAPN14A8MX76 684 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 C4orf51C9J302 202 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 E7EVH7 732 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 H0Y3Z8 333 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 CYR61O00622 381 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 TP53I11O14683 189 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 B3GALT2O43825 422 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 GPRIN2O60269 458 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 CDH16O75309 829 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 VAPBO95292 243 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 ETHE1O95571 254 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 IGKV3-11P04433 115 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 C8GP07360 202 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 CLEC2LP0C7M8 214 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 COX7A2P14406 83 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 PPP3CBP16298 524 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 EGR1P18146 543 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 OGNP20774 298 aaKnown RBP4.15□□□□□ -1.75
SNHG1-214ENST00000540865 CD40P25942 277 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 APEX1P27695 318 aaKnown RBP4.15□□□□□ -1.75
SNHG1-214ENST00000540865 STIP1P31948 543 aaKnown RBP4.15□□□□□ -1.75
SNHG1-214ENST00000540865 LSP1P33241 339 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 CTNNA1P35221 906 aaKnown RBP4.15□□□□□ -1.75
SNHG1-214ENST00000540865 RPL22P35268 128 aaKnown RBP4.15□□□□□ -1.75
SNHG1-214ENST00000540865 ACVR1BP36896 505 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 MSH2P43246 934 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 NAGLUP54802 743 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 CASP9P55211 416 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 KRTAP10-2P60368 255 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 REEP5Q00765 189 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 ROM1Q03395 351 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 LOXL1Q08397 574 aaPredicted RBP4.15□□□□□ -1.75
SNHG1-214ENST00000540865 CTBP1Q13363 440 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 CUL1Q13616 776 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 CSHL1Q14406 222 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 IQCB1Q15051 598 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 TOMM20Q15388 145 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 PDLIM3Q53GG5 364 aaPredicted RBP4.15□□□□□ -1.75
SNHG1-214ENST00000540865 TOR1AIP1Q5JTV8 583 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 FNDC7Q5VTL7 733 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 DUPD1Q68J44 220 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 TIGD3Q6B0B8 471 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 CYB5R2Q6BCY4 276 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 OR2A2Q6IF42 318 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 LRRC8EQ6NSJ5 796 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 C11orf63Q6NUN7 778 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 CASC4Q6P4E1 433 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 ENPP6Q6UWR7 440 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 ZNF550Q7Z398 422 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 PIWIL4Q7Z3Z4 852 aaKnown RBP4.15□□□□□ -1.75
SNHG1-214ENST00000540865 CLNKQ7Z7G1 428 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 MEX3DQ86XN8 651 aaKnown RBP4.15□□□□□ -1.75
SNHG1-214ENST00000540865 C9orf40Q8IXQ3 194 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 ANKRD53Q8N9V6 530 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 FAM47BQ8NA70 645 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 FAM83FQ8NEG4 500 aaPredicted RBP4.15□□□□□ -1.75
SNHG1-214ENST00000540865 OR8K1Q8NGG5 319 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 OR56A3Q8NH54 315 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 SLC35B2Q8TB61 432 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 CALML6Q8TD86 181 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 ZNF721Q8TF20 911 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 SLC5A11Q8WWX8 675 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 AKAP1Q92667 903 aaKnown RBP eCLIP4.15□□□□□ -1.75
SNHG1-214ENST00000540865 REPS1Q96D71 796 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 ZC3HAV1LQ96H79 300 aaKnown RBP4.15□□□□□ -1.75
SNHG1-214ENST00000540865 SENP5Q96HI0 755 aaPredicted RBP4.15□□□□□ -1.75
SNHG1-214ENST00000540865 RILPQ96NA2 401 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 GNRHR2Q96P88 292 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 OR4K3Q96R72 315 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 TNFRSF13CQ96RJ3 184 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 RHNO1Q9BSD3 238 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 IL22Q9GZX6 179 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 AICDAQ9GZX7 198 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 PELI2Q9HAT8 420 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 PARVBQ9HBI1 364 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 HOMER3Q9NSC5 361 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 INTS10Q9NVR2 710 aaKnown RBP4.15□□□□□ -1.75
SNHG1-214ENST00000540865 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.15□□□□□ -1.75
SNHG1-214ENST00000540865 WWOXQ9NZC7 414 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 CLCF1Q9UBD9 225 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms