RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 PLD4Q96BZ4 506 aa6.53□□□□□ -1.36
CPSF7-215ENST00000536145 PPCDCQ96CD2 204 aa6.53□□□□□ -1.36
CPSF7-215ENST00000536145 NEURL3Q96EH8 262 aa6.53□□□□□ -1.36
CPSF7-215ENST00000536145 ZNF354BQ96LW1 612 aa6.53□□□□□ -1.36
CPSF7-215ENST00000536145 SLC38A2Q96QD8 506 aa6.53□□□□□ -1.36
CPSF7-215ENST00000536145 ABHD1Q96SE0 405 aa6.53□□□□□ -1.36
CPSF7-215ENST00000536145 MTERF1Q99551 399 aaKnown RBP6.53□□□□□ -1.36
CPSF7-215ENST00000536145 TIMP4Q99727 224 aa6.53□□□□□ -1.36
CPSF7-215ENST00000536145 HIST1H2AJQ99878 128 aa6.53□□□□□ -1.36
CPSF7-215ENST00000536145 PELOQ9BRX2 385 aaKnown RBP6.53□□□□□ -1.36
CPSF7-215ENST00000536145 H2AFJQ9BTM1 129 aa6.53□□□□□ -1.36
CPSF7-215ENST00000536145 C2orf49Q9BVC5 232 aaPredicted RBP6.53□□□□□ -1.36
CPSF7-215ENST00000536145 TMPRSS13Q9BYE2 586 aa6.53□□□□□ -1.36
CPSF7-215ENST00000536145 HDHD2Q9H0R4 259 aa6.53□□□□□ -1.36
CPSF7-215ENST00000536145 SMG9Q9H0W8 520 aaKnown RBP6.53□□□□□ -1.36
CPSF7-215ENST00000536145 ATG10Q9H0Y0 220 aa6.53□□□□□ -1.36
CPSF7-215ENST00000536145 ABCG5Q9H222 651 aa6.53□□□□□ -1.36
CPSF7-215ENST00000536145 CXorf36Q9H7Y0 433 aa6.53□□□□□ -1.36
CPSF7-215ENST00000536145 SGK2Q9HBY8 427 aa6.53□□□□□ -1.36
CPSF7-215ENST00000536145 IFT46Q9NQC8 304 aa6.53□□□□□ -1.36
CPSF7-215ENST00000536145 NANSQ9NR45 359 aa6.53□□□□□ -1.36
CPSF7-215ENST00000536145 UCKL1Q9NWZ5 548 aa6.53□□□□□ -1.36
CPSF7-215ENST00000536145 SDHAF2Q9NX18 166 aa6.53□□□□□ -1.36
CPSF7-215ENST00000536145 STOX2Q9P2F5 926 aaPredicted RBP6.53□□□□□ -1.36
CPSF7-215ENST00000536145 GULP1Q9UBP9 304 aa6.53□□□□□ -1.36
CPSF7-215ENST00000536145 ZNF222Q9UK12 451 aa6.53□□□□□ -1.36
CPSF7-215ENST00000536145 FCF1Q9Y324 198 aaKnown RBP6.53□□□□□ -1.36
CPSF7-215ENST00000536145 MAP4K5Q9Y4K4 846 aa6.53□□□□□ -1.36
CPSF7-215ENST00000536145 MAB21L2Q9Y586 359 aa6.53□□□□□ -1.36
CPSF7-215ENST00000536145 SIRT4Q9Y6E7 314 aaPredicted RBP6.53□□□□□ -1.36
CPSF7-215ENST00000536145 C2orf92A0A1B0GVN3 265 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 A0A1W2PRB8 838 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 A0A1W2PRG6 482 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 PLSCR5A0PG75 271 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 PRAMEF27A3QJZ7 478 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 ANKRD61A6NGH8 418 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 A8MX80 341 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 H3BN98 237 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 M0QZ92 97 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 CTDSPLO15194 276 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 OR10H3O60404 316 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 SERPINI2O75830 405 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 RGS9O75916 674 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-215ENST00000536145 UBXN7O94888 489 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 SLCO2B1O94956 709 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 HPXP02790 462 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 NMBP08949 121 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 H2AFB1P0C5Y9 115 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 H2AFB2P0C5Z0 115 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 PEPDP12955 493 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 CD53P19397 219 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 CXCL2P19875 107 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 SSTR2P30874 369 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 CD52P31358 61 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 ATP5C1P36542 298 aaKnown RBP6.52□□□□□ -1.37
CPSF7-215ENST00000536145 NUP62P37198 522 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-215ENST00000536145 FRKP42685 505 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-215ENST00000536145 INPP1P49441 399 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 SELENOPP49908 381 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 RNF144AP50876 292 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-215ENST00000536145 ZNF81P51508 661 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 SMSP52788 366 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 DCDC1P59894 354 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 CSTF1Q05048 431 aaKnown RBP6.52□□□□□ -1.37
CPSF7-215ENST00000536145 DBPQ10586 325 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-215ENST00000536145 BTN1A1Q13410 526 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 KLF9Q13886 244 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-215ENST00000536145 INSL4Q14641 139 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 MORN1Q5T089 497 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 GDF6Q6KF10 455 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-215ENST00000536145 SMARCD3Q6STE5 483 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 SERPINA13PQ6UXR4 307 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 CFAP77Q6ZQR2 320 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 ASB18Q6ZVZ8 466 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 IKBIPQ70UQ0 350 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 C16orf59Q7L2K0 433 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 COMMD6Q7Z4G1 85 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 HSD17B13Q7Z5P4 300 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-215ENST00000536145 TECPR1Q7Z6L1 1165 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 TSPAN33Q86UF1 283 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 SERINC5Q86VE9 423 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 ZNF280BQ86YH2 543 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 SIAH3Q8IW03 269 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 TBC1D19Q8N5T2 526 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-215ENST00000536145 ANKRD53Q8N9V6 530 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 DCAF4L2Q8NA75 395 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 KCT2Q8NC54 265 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 FBXO15Q8NCQ5 510 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-215ENST00000536145 SRFBP1Q8NEF9 429 aaKnown RBP6.52□□□□□ -1.37
CPSF7-215ENST00000536145 TTLQ8NG68 377 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 OR4K5Q8NGD3 323 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 OR4Q3Q8NH05 313 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 OR51Q1Q8NH59 317 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 OR5AK3PQ8NH89 298 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 GNPDA2Q8TDQ7 276 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 SLC38A5Q8WUX1 472 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 SPRYD4Q8WW59 207 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-215ENST00000536145 OR5P2Q8WZ92 322 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 CLP1Q92989 425 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms