RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 ZDHHC7Q9NXF8 308 aa17.26■□□□□ 0.35
SFSWAP-203ENST00000535236 ABCC6O95255 1503 aa17.26■□□□□ 0.35
SFSWAP-203ENST00000535236 ZNF182P17025 639 aaPredicted RBP17.26■□□□□ 0.35
SFSWAP-203ENST00000535236 PPA1Q15181 289 aa17.26■□□□□ 0.35
SFSWAP-203ENST00000535236 AWAT2Q6E213 333 aa17.26■□□□□ 0.35
SFSWAP-203ENST00000535236 DTX3Q8N9I9 347 aa17.26■□□□□ 0.35
SFSWAP-203ENST00000535236 ZNF420Q8TAQ5 688 aaPredicted RBP17.26■□□□□ 0.35
SFSWAP-203ENST00000535236 BOCQ9BWV1 1114 aa17.26■□□□□ 0.35
SFSWAP-203ENST00000535236 TMEM185BQ9H7F4 350 aa17.26■□□□□ 0.35
SFSWAP-203ENST00000535236 TLE3Q04726 772 aa17.26■□□□□ 0.35
SFSWAP-203ENST00000535236 NR0B2Q15466 257 aa17.26■□□□□ 0.35
SFSWAP-203ENST00000535236 BLOC1S3Q6QNY0 202 aa17.26■□□□□ 0.35
SFSWAP-203ENST00000535236 TMEM135Q86UB9 458 aa17.26■□□□□ 0.35
SFSWAP-203ENST00000535236 ZC3H3Q8IXZ2 948 aaKnown RBP17.26■□□□□ 0.35
SFSWAP-203ENST00000535236 CLECL1Q8IZS7 167 aa17.26■□□□□ 0.35
SFSWAP-203ENST00000535236 SPTSSAQ969W0 71 aa17.26■□□□□ 0.35
SFSWAP-203ENST00000535236 FKBP10Q96AY3 582 aa17.26■□□□□ 0.35
SFSWAP-203ENST00000535236 ENTPD2Q9Y5L3 495 aa17.26■□□□□ 0.35
SFSWAP-203ENST00000535236 PHLPP1O60346 1717 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 POLR2HP52434 150 aaKnown RBP17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 ARG2P78540 354 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 COL28A1Q2UY09 1125 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 DEFB133Q30KQ1 61 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 Q8N402 240 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 OR52N2Q8NGI0 321 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 RRNAD1Q96FB5 475 aaKnown RBP17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 PRDM4Q9UKN5 801 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 ART1P52961 327 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 BDH1Q02338 343 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 SPHARQ15513 63 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 C18orf21Q32NC0 220 aaPredicted RBP17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 CCDC58Q4VC31 144 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 COMMD6Q7Z4G1 85 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 TMEM173Q86WV6 379 aaPredicted RBP17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 OR9K2Q8NGE7 335 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 APOOQ9BUR5 198 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 ABRACLQ9P1F3 81 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 LRRTM2O43300 516 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 NPR2P20594 1047 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 TMBIM6P55061 237 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 PIGFQ07326 219 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 UBE2UQ5VVX9 321 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 ZNF551Q7Z340 670 aaPredicted RBP17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 ARL14Q8N4G2 192 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 TEPSINQ96N21 525 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 NAALAD2Q9Y3Q0 740 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 A6NL46 340 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 PRKYO43930 277 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 CYBAP13498 195 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 GCH1P30793 250 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 EPHA4P54764 986 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 TMEM205Q6UW68 189 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 MINDY1Q8N5J2 469 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 MGLLQ99685 303 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 SLC12A9Q9BXP2 914 aa17.25■□□□□ 0.35
SFSWAP-203ENST00000535236 EIF3FO00303 357 aaPredicted RBP17.24■□□□□ 0.35
SFSWAP-203ENST00000535236 H2AFB2P0C5Z0 115 aa17.24■□□□□ 0.35
SFSWAP-203ENST00000535236 SFTPDP35247 375 aa17.24■□□□□ 0.35
SFSWAP-203ENST00000535236 APLNRP35414 380 aa17.24■□□□□ 0.35
SFSWAP-203ENST00000535236 LSSP48449 732 aa17.24■□□□□ 0.35
SFSWAP-203ENST00000535236 Q6ZSR6 202 aa17.24■□□□□ 0.35
SFSWAP-203ENST00000535236 NRMQ8IXM6 262 aa17.24■□□□□ 0.35
SFSWAP-203ENST00000535236 LMO3Q8TAP4 145 aa17.24■□□□□ 0.35
SFSWAP-203ENST00000535236 SOX17Q9H6I2 414 aaPredicted RBP17.24■□□□□ 0.35
SFSWAP-203ENST00000535236 MEPEQ9NQ76 525 aaPredicted RBP17.24■□□□□ 0.35
SFSWAP-203ENST00000535236 STUB1Q9UNE7 303 aa17.24■□□□□ 0.35
SFSWAP-203ENST00000535236 PABPC4LP0CB38 370 aaKnown RBP17.24■□□□□ 0.35
SFSWAP-203ENST00000535236 PRAMEF8Q5VWM4 474 aa17.24■□□□□ 0.35
SFSWAP-203ENST00000535236 PRAMEF7Q5VXH5 474 aa17.24■□□□□ 0.35
SFSWAP-203ENST00000535236 PLBD1Q6P4A8 553 aa17.24■□□□□ 0.35
SFSWAP-203ENST00000535236 SHFQ7M4L6 423 aa17.24■□□□□ 0.35
SFSWAP-203ENST00000535236 TMEM151AQ8N4L1 468 aa17.24■□□□□ 0.35
SFSWAP-203ENST00000535236 CHPT1Q8WUD6 406 aa17.24■□□□□ 0.35
SFSWAP-203ENST00000535236 MS4A4EQ96PG1 132 aa17.24■□□□□ 0.35
SFSWAP-203ENST00000535236 C10orf71Q711Q0 1435 aa17.24■□□□□ 0.35
SFSWAP-203ENST00000535236 STSP08842 583 aa17.24■□□□□ 0.35
SFSWAP-203ENST00000535236 P2RY2P41231 377 aa17.24■□□□□ 0.35
SFSWAP-203ENST00000535236 MAFIPQ8WZ33 124 aa17.24■□□□□ 0.35
SFSWAP-203ENST00000535236 PLEKHA3Q9HB20 300 aa17.24■□□□□ 0.35
SFSWAP-203ENST00000535236 OR5AR1Q8NGP9 310 aa17.24■□□□□ 0.35
SFSWAP-203ENST00000535236 ISOC1Q96CN7 298 aa17.24■□□□□ 0.35
SFSWAP-203ENST00000535236 ACTR6Q9GZN1 396 aa17.24■□□□□ 0.35
SFSWAP-203ENST00000535236 ACTR10Q9NZ32 417 aa17.24■□□□□ 0.35
SFSWAP-203ENST00000535236 C17orf105B2RV13 164 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 SYT7O43581 403 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 SLC16A8O95907 504 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 AKR1C4P17516 323 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 EMP2P54851 167 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 TUBB3Q13509 450 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 PHC2Q8IXK0 858 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 MS4A15Q8N5U1 240 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 SLC5A8Q8N695 610 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 HHIPQ96QV1 700 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 OR5B2Q96R09 309 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 PAPOLGQ9BWT3 736 aaKnown RBP17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 LINC00597Q9H2U6 94 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 PAK1IP1Q9NWT1 392 aaPredicted RBP17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 LOC102723532A0A0G2JNH3 316 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 HTR3BO95264 441 aa17.23■□□□□ 0.35
SFSWAP-203ENST00000535236 LCATP04180 440 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms