RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 ATP1B2P14415 290 aaPredicted RBP8.54□□□□□ -1.04
SF3B2-216ENST00000534765 C4BPBP20851 252 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 LCN1P31025 176 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 BDKRB1P46663 353 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 STARP49675 285 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 CRISP3P54108 245 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 HMGCS1Q01581 520 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 TNFRSF17Q02223 184 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 PRKG2Q13237 762 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 LARS2Q15031 903 aaKnown RBP8.54□□□□□ -1.04
SF3B2-216ENST00000534765 TSC22D1Q15714 1073 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 XKR7Q5GH72 579 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 NLRC3Q7RTR2 1065 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 DPPA2Q7Z7J5 298 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 ANKRD46Q86W74 232 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 RASGRP3Q8IV61 690 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 SVOPLQ8N434 492 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 DNASE1L2Q92874 299 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 ELP4Q96EB1 424 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 CXorf58Q96LI9 332 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 IL4I1Q96RQ9 567 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 C1QTNF3Q9BXJ4 246 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 SYNPO2LQ9H987 977 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 OR1A2Q9Y585 309 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 OR2A25A4D2G3 310 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 OR6C74A6NCV1 312 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 ST8SIA5O15466 376 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 PRG2P13727 222 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 CD9P21926 228 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 PTAFRP25105 342 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 SLC35A2P78381 396 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 S100A12P80511 92 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 ALKBH1Q13686 389 aaKnown RBP8.54□□□□□ -1.04
SF3B2-216ENST00000534765 SAXO2Q658L1 398 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 LRRN1Q6UXK5 716 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 LINC00299Q6ZSB3 139 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 VN1R5Q7Z5H4 357 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 SFTPA2Q8IWL1 248 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 MS4A15Q8N5U1 240 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 ZNF565Q8N9K5 539 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 MOSPD2Q8NHP6 518 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 FCGR1BQ92637 280 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 ATOH1Q92858 354 aaPredicted RBP8.54□□□□□ -1.04
SF3B2-216ENST00000534765 NXPE2Q96DL1 559 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 LURAP1Q96LR2 239 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 OPALINQ96PE5 141 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 ZNF576Q9H609 170 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 SERHLQ9NQF3 203 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 OR10H1Q9Y4A9 318 aa8.54□□□□□ -1.04
SF3B2-216ENST00000534765 CFAP20Q9Y6A4 193 aaKnown RBP8.54□□□□□ -1.04
SF3B2-216ENST00000534765 FXYD6-FXYD2A0A087WZ82 144 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 A0A1B0GV90 55 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 ELOVL7A1L3X0 281 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 LINC00862A6NCI5 91 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 IGLON5A6NGN9 336 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 HTR3BO95264 441 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 FGF19O95750 216 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 ADH1CP00326 375 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 CFDP00746 253 aaPredicted RBP8.53□□□□□ -1.04
SF3B2-216ENST00000534765 SLC2A4P14672 509 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 DRD5P21918 477 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 RGS6P49758 472 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 RBMS2Q15434 407 aaKnown RBP8.53□□□□□ -1.04
SF3B2-216ENST00000534765 IQCCQ4KMZ1 466 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 TMEM196Q5HYL7 178 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 C22orf42Q6IC83 251 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 GPALPP1Q8IXQ4 340 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 TCTE3Q8IZS6 198 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 MINDY1Q8N5J2 469 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 C2orf73Q8N5S3 287 aaPredicted RBP8.53□□□□□ -1.04
SF3B2-216ENST00000534765 ZNF655Q8N720 491 aaPredicted RBP8.53□□□□□ -1.04
SF3B2-216ENST00000534765 PTP4A1Q93096 173 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 OTUB2Q96DC9 234 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 RNFT2Q96EX2 444 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 COPS8Q99627 209 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 SLC29A3Q9BZD2 475 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 POLR2J2Q9GZM3 115 aaKnown RBP8.53□□□□□ -1.04
SF3B2-216ENST00000534765 FXYD6Q9H0Q3 95 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 ABCG4Q9H172 646 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 OR51B5Q9H339 312 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 PCDHGA6Q9Y5G7 932 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 A0A1B0GW55 424 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 A0A1W2PP55 124 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 CARNS1A5YM72 827 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 LOC730098B7Z3J9 87 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 OIP5O43482 229 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 ELFN1P0C7U0 828 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 DUX4L2P0CJ85 424 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 DUX4L3P0CJ86 424 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 DUX4L4P0CJ87 422 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 DUX4L5P0CJ88 424 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 DUX4L6P0CJ89 424 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 DUX4L7P0CJ90 424 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 ZNF7P17097 686 aaPredicted RBP8.53□□□□□ -1.04
SF3B2-216ENST00000534765 ZNF8P17098 575 aaPredicted RBP8.53□□□□□ -1.04
SF3B2-216ENST00000534765 JUNDP17535 347 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 CPN2P22792 545 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 UGT2B10P36537 528 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 ARFIP1P53367 373 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 LIPKQ5VXJ0 399 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms