RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 CMTM7Q96FZ5 175 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 CCDC120Q96HB5 630 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 CSF3RQ99062 836 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 DOK1Q99704 481 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 UGT2B28Q9BY64 529 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 C8orf4Q9NR00 106 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 DNAJC11Q9NVH1 559 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 SPHK1Q9NYA1 384 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 OR6C2Q9NZP2 312 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 KLHL42Q9P2K6 505 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 SNX6Q9UNH7 406 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 SH2B3Q9UQQ2 575 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 MED13LQ71F56 2210 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 TRAV17A0A0B4J275 112 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 CCL21O00585 134 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 RFXANKO14593 260 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 KDM1AO60341 852 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 ERN1O75460 977 aaKnown RBP7.69□□□□□ -1.18
NEDD8-207ENST00000533242 KLHL18O94889 574 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 SLCO2B1O94956 709 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 SCELO95171 688 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 SLC16A8O95907 504 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 HIST1H2AGP0C0S8 130 aaPredicted RBP7.69□□□□□ -1.18
NEDD8-207ENST00000533242 LAMP1P11279 417 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 HIST1H2ADP20671 130 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 ALAS2P22557 587 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 PRPH2P23942 346 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 EEF1B2P24534 225 aaKnown RBP7.69□□□□□ -1.18
NEDD8-207ENST00000533242 EPHA2P29317 976 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 CA7P43166 264 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 RAE1P78406 368 aaKnown RBP7.69□□□□□ -1.18
NEDD8-207ENST00000533242 DOC2AQ14183 400 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 KIR2DS3Q14952 304 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 LRRC23Q53EV4 343 aaPredicted RBP7.69□□□□□ -1.18
NEDD8-207ENST00000533242 LINC00696Q6ZRV3 163 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 GALNT5Q7Z7M9 940 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 PTOV1Q86YD1 416 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 ZNF295-AS1Q8N0V1 137 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 OR11G2Q8NGC1 345 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 OR5AR1Q8NGP9 310 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 CDC26Q8NHZ8 85 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 HIST1H2AHQ96KK5 128 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 MAGEB10Q96LZ2 347 aaPredicted RBP7.69□□□□□ -1.18
NEDD8-207ENST00000533242 HIST1H2AJQ99878 128 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 RHNO1Q9BSD3 238 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 H2AFJQ9BTM1 129 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 ENAMQ9NRM1 1142 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 ETAA1Q9NY74 926 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 ABI3Q9P2A4 366 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 NCOA6Q14686 2063 aaPredicted RBP7.69□□□□□ -1.18
NEDD8-207ENST00000533242 TRGV8A0A0C4DH27 118 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 VSTM2BA6NLU5 285 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 MAGEB17A8MXT2 336 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 ISM1B1AKI9 464 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 hCG_2039718K7EN88 272 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 MAGEB3O15480 346 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 HS6ST1O60243 411 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 GMNNO75496 209 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 ZNF682O95780 498 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 MPC1LP0DKB6 136 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 PRPS2P11908 318 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 AGAP20933 346 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 NR4A1P22736 598 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 HNMTP50135 292 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 CASP9P55211 416 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 ISL1P61371 349 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 ESRRGP62508 458 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 ARG2P78540 354 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 VLDLRP98155 873 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 IRF8Q02556 426 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 NAE1Q13564 534 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 XKR6Q5GH73 641 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 CDKL4Q5MAI5 379 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 ZNF773Q6PK81 442 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 XKRXQ6PP77 449 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 SPNS3Q6ZMD2 512 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 TTLL10Q6ZVT0 673 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 THAP5Q7Z6K1 395 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 THOC6Q86W42 341 aaKnown RBP7.69□□□□□ -1.18
NEDD8-207ENST00000533242 MCATQ8IVS2 390 aaKnown RBP7.69□□□□□ -1.18
NEDD8-207ENST00000533242 BPIFB6Q8NFQ5 453 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 OR52E4Q8NGH9 312 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 OR13F1Q8NGS4 319 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 DNAJB8Q8NHS0 232 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 CNIH3Q8TBE1 160 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 HSPBAP1Q96EW2 488 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 PYURFQ96I23 114 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 REXO5Q96IC2 774 aaKnown RBP7.69□□□□□ -1.18
NEDD8-207ENST00000533242 FCRL1Q96LA6 429 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 TAAR6Q96RI8 345 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 TIMMDC1Q9NPL8 285 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 STOX2Q9P2F5 926 aaPredicted RBP7.69□□□□□ -1.18
NEDD8-207ENST00000533242 EXO1Q9UQ84 846 aaKnown RBP7.69□□□□□ -1.18
NEDD8-207ENST00000533242 SVILO95425 2214 aa7.69□□□□□ -1.18
NEDD8-207ENST00000533242 PRRC2CQ9Y520 2896 aaKnown RBP7.69□□□□□ -1.18
NEDD8-207ENST00000533242 A0A0J9YVX5 310 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 TRIM64BA6NI03 449 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 TMEM229AB2RXF0 380 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 EIF3FO00303 357 aaPredicted RBP7.68□□□□□ -1.18
NEDD8-207ENST00000533242 GNGT2O14610 69 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms