RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 GIMAP5Q96F15 307 aa12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 C7orf26Q96N11 449 aa12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 USP9XQ93008 2570 aaPredicted RBP12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 ANKRD33BA6NCL7 494 aa12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 FRG2CA6NGY1 282 aa12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 SLCO1B7G3V0H7 640 aa12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 G3V3Y1 287 aa12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 ADAM10O14672 748 aa12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 TSPAN2O60636 221 aa12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 PPM1BO75688 479 aa12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 KITP10721 976 aa12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 EPHA3P29320 983 aa12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 PIGAP37287 484 aa12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 RFC3P40938 356 aa12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 DNASE1L1P49184 302 aa12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 NNATQ16517 81 aa12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 HYAL4Q2M3T9 481 aa12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 SLC9B1Q4ZJI4 515 aa12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 CPTPQ5TA50 214 aa12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 MYO7BQ6PIF6 2116 aa12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 PRR22Q8IZ63 422 aa12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 FBXW8Q8N3Y1 598 aa12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 OR4N2Q8NGD1 307 aa12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 SPPL2AQ8TCT8 520 aa12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 CKAP2Q8WWK9 683 aa12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 ZBED6CLQ96FA7 236 aaPredicted RBP12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 TEX37Q96LM6 180 aa12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 GPR137Q96N19 417 aa12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 CLMPQ9H6B4 373 aa12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 ASH1LQ9NR48 2969 aaKnown RBP12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 SACM1LQ9NTJ5 587 aa12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 TUBA8Q9NY65 449 aaPredicted RBP12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 TAS2R9Q9NYW1 312 aa12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 GPR45Q9Y5Y3 372 aa12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 PCNX3Q9H6A9 2034 aa12.81□□□□□ -0.36
TSPAN4-220ENST00000532375 SETXQ7Z333 2677 aaKnown RBP12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 GOLGA8QA0A0J9YX86 632 aa12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 GOLGA8OA6NCC3 632 aa12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 GOLGA8NF8WBI6 632 aa12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 ACOX3O15254 700 aa12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 ASNA1O43681 348 aa12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 UGT2B11O75310 529 aa12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 ERN1O75460 977 aaKnown RBP12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 HPCAL1P37235 193 aa12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 RPL3P39023 403 aaKnown RBP12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 PTGDSP41222 190 aa12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 MANFP55145 182 aaKnown RBP12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 ALDH6A1Q02252 535 aaKnown RBP12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 HSPB3Q12988 150 aa12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 RPS6KA2Q15349 733 aa12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 CMPK2Q5EBM0 449 aa12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 FNDC7Q5VTL7 733 aa12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 BICRALQ6AI39 1079 aa12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 TMEM81Q6P7N7 255 aa12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 EPGNQ6UW88 154 aa12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 RGS9BPQ6ZS82 235 aa12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 NUP54Q7Z3B4 507 aa12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 FGD2Q7Z6J4 655 aa12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 FAM98AQ8NCA5 519 aaKnown RBP12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 ACTRT2Q8TDY3 377 aa12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 RNF138Q8WVD3 245 aa12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 OMA1Q96E52 524 aa12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 OR52B2Q96RD2 323 aa12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 SECISBP2Q96T21 854 aaKnown RBP12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 FAM173AQ9BQD7 235 aa12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 LMF2Q9BU23 707 aaKnown RBP12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 ANGPTL4Q9BY76 406 aa12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 BHLHE41Q9C0J9 482 aaPredicted RBP12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 TSPAN10Q9H1Z9 355 aaPredicted RBP12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 PLSCR2Q9NRY7 297 aa12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 INTS9Q9NV88 658 aaKnown RBP12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 AIG1Q9NVV5 245 aa12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 CNIH4Q9P003 139 aa12.8□□□□□ -0.36
TSPAN4-220ENST00000532375 DIDO1Q9BTC0 2240 aaKnown RBP12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 UQCRHLA0A096LP55 91 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 A0A1W2PRB8 838 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 LRRC3CA6NJW4 275 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 TRPC5OSA6NMA1 111 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 NPIPA5E9PKD4 350 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 HS6ST1O60243 411 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 SEMA7AO75326 666 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 TRIM3O75382 744 aaPredicted RBP12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 UNC5CO95185 931 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 P04436 131 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 IL12AP29459 219 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 CASP3P42574 277 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 NRG3P56975 720 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 KCNK10P57789 538 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 UFM1P61960 85 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 GAB1Q13480 694 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 KRTCAP3Q53RY4 240 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 PRAMEF20Q5VT98 475 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 WDR53Q7Z5U6 358 aaPredicted RBP12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 SLC34A3Q8N130 599 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 NATD1Q8N6N6 113 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 GOLGA6L1Q8N7Z2 621 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 FAM13CQ8NE31 585 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 OR8J2Q8NGG1 315 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 OR52N2Q8NGI0 321 aa12.79□□□□□ -0.36
TSPAN4-220ENST00000532375 OR5M3Q8NGP4 307 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms