RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 PITPNBP48739 271 aa13.83□□□□□ -0.2
CAPN1-214ENST00000528165 EPHA5P54756 1037 aa13.83□□□□□ -0.2
CAPN1-214ENST00000528165 CDH11P55287 796 aa13.83□□□□□ -0.2
CAPN1-214ENST00000528165 SRP54P61011 504 aaKnown RBP13.83□□□□□ -0.2
CAPN1-214ENST00000528165 GARNL3Q5VVW2 1013 aa13.83□□□□□ -0.2
CAPN1-214ENST00000528165 PRSS55Q6UWB4 352 aaPredicted RBP13.83□□□□□ -0.2
CAPN1-214ENST00000528165 GPAT4Q86UL3 456 aa13.83□□□□□ -0.2
CAPN1-214ENST00000528165 KLHDC8AQ8IYD2 350 aa13.83□□□□□ -0.2
CAPN1-214ENST00000528165 OR4F15Q8NGB8 312 aa13.83□□□□□ -0.2
CAPN1-214ENST00000528165 RBPMSQ93062 196 aaKnown RBP13.83□□□□□ -0.2
CAPN1-214ENST00000528165 RBP7Q96R05 134 aa13.83□□□□□ -0.2
CAPN1-214ENST00000528165 PTPN18Q99952 460 aa13.83□□□□□ -0.2
CAPN1-214ENST00000528165 SAP130Q9H0E3 1048 aa13.83□□□□□ -0.2
CAPN1-214ENST00000528165 LINC00597Q9H2U6 94 aa13.83□□□□□ -0.2
CAPN1-214ENST00000528165 ASB6Q9NWX5 421 aa13.83□□□□□ -0.2
CAPN1-214ENST00000528165 RDH8Q9NYR8 311 aa13.83□□□□□ -0.2
CAPN1-214ENST00000528165 PTGFRNQ9P2B2 879 aa13.83□□□□□ -0.2
CAPN1-214ENST00000528165 MAB21L2Q9Y586 359 aa13.83□□□□□ -0.2
CAPN1-214ENST00000528165 FKBP7Q9Y680 259 aa13.83□□□□□ -0.2
CAPN1-214ENST00000528165 A0A1B0GVI7 797 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 SLC28A2O43868 658 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 ZNF821O75541 412 aaPredicted RBP13.82□□□□□ -0.2
CAPN1-214ENST00000528165 KLHL18O94889 574 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 TCRBP04435 133 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 RBMS1P29558 406 aaKnown RBP13.82□□□□□ -0.2
CAPN1-214ENST00000528165 MANFP55145 182 aaKnown RBP13.82□□□□□ -0.2
CAPN1-214ENST00000528165 TAF12Q16514 161 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 ZNF791Q3KP31 576 aaPredicted RBP13.82□□□□□ -0.2
CAPN1-214ENST00000528165 ENTPD8Q5MY95 495 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 HIST2H2AA3Q6FI13 130 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 C1orf94Q6P1W5 598 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 FUT10Q6P4F1 479 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 IL20RBQ6UXL0 311 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 PRICKLE2Q7Z3G6 844 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 SAMD12Q8N8I0 201 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 OR8K5Q8NH50 307 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 MRPS31Q92665 395 aaKnown RBP13.82□□□□□ -0.2
CAPN1-214ENST00000528165 SECISBP2Q96T21 854 aaKnown RBP13.82□□□□□ -0.2
CAPN1-214ENST00000528165 CBLCQ9ULV8 474 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 ZFR2Q9UPR6 939 aaKnown RBP13.82□□□□□ -0.2
CAPN1-214ENST00000528165 ICKQ9UPZ9 632 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 EIF4EP06730 217 aaKnown RBP13.82□□□□□ -0.2
CAPN1-214ENST00000528165 SRP9P49458 86 aaKnown RBP13.82□□□□□ -0.2
CAPN1-214ENST00000528165 BAMBIQ13145 260 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 HBMQ6B0K9 141 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 IKBIPQ70UQ0 350 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 MEX3DQ86XN8 651 aaKnown RBP13.82□□□□□ -0.2
CAPN1-214ENST00000528165 GPR135Q8IZ08 494 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 PIAS4Q8N2W9 510 aaPredicted RBP13.82□□□□□ -0.2
CAPN1-214ENST00000528165 PMEPA1Q969W9 287 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 EFCAB11Q9BUY7 163 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 BTBD1Q9H0C5 482 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 SUV39H2Q9H5I1 410 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 C11orf49Q9H6J7 331 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 RWDD3Q9Y3V2 267 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 DYRK1BQ9Y463 629 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 RNF215Q9Y6U7 377 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 A0A1B0GVC2 190 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 A6NIN4 97 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 MMP20O60882 483 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 SYPP08247 313 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 HOXD4P09016 255 aaPredicted RBP13.82□□□□□ -0.2
CAPN1-214ENST00000528165 RFX3P48380 749 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 SNRPD1P62314 119 aaKnown RBP13.82□□□□□ -0.2
CAPN1-214ENST00000528165 TBPL1P62380 186 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 PUDPQ08623 228 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 CAMK2DQ13557 499 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 BHLHB9Q6PI77 547 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 POGLUT1Q8NBL1 392 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 SPRYD4Q8WW59 207 aaPredicted RBP13.82□□□□□ -0.2
CAPN1-214ENST00000528165 SCAMP4Q969E2 229 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 RFKQ969G6 155 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 TMEM169Q96HH4 297 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 FOPNLQ96NB1 174 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 GSX2Q9BZM3 304 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 SERHL2Q9H4I8 314 aa13.82□□□□□ -0.2
CAPN1-214ENST00000528165 KDM4EB2RXH2 506 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-214ENST00000528165 GPR171O14626 319 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 SLC9A3R1O14745 358 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-214ENST00000528165 HMGA1P17096 107 aaKnown RBP13.81□□□□□ -0.2
CAPN1-214ENST00000528165 ATP6V1E1P36543 226 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 MEF2AQ02078 507 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-214ENST00000528165 ZNF155Q12901 538 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-214ENST00000528165 CEP350Q5VT06 3117 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 ARSKQ6UWY0 536 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 C6orf120Q7Z4R8 191 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 OAFQ86UD1 273 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 KLBQ86Z14 1044 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 LILRA3Q8N6C8 439 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-214ENST00000528165 SRFBP1Q8NEF9 429 aaKnown RBP13.81□□□□□ -0.2
CAPN1-214ENST00000528165 NLGN2Q8NFZ4 835 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 ECHDC3Q96DC8 303 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 TREX2Q9BQ50 279 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-214ENST00000528165 CTPS2Q9NRF8 586 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 LYARQ9NX58 379 aaKnown RBP13.81□□□□□ -0.2
CAPN1-214ENST00000528165 B4GALT6Q9UBX8 382 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 SLC9A8Q9Y2E8 581 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 A0A1W2PPL8 197 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 M0R233 179 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 HMGN4O00479 90 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms