RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-223	ENST00000523125	KRT4	P19013	534 aa		11.31	□□□□□ -0.6
VEGFA-223	ENST00000523125	MSX1	P28360	303 aa		11.31	□□□□□ -0.6
VEGFA-223	ENST00000523125	PTPN6	P29350	595 aa		11.31	□□□□□ -0.6
VEGFA-223	ENST00000523125	CDK9	P50750	372 aa	Known RBP	11.31	□□□□□ -0.6
VEGFA-223	ENST00000523125	KRTAP10-9	P60411	292 aa		11.31	□□□□□ -0.6
VEGFA-223	ENST00000523125	NAA20	P61599	178 aa		11.31	□□□□□ -0.6
VEGFA-223	ENST00000523125	DCAF7	P61962	342 aa		11.31	□□□□□ -0.6
VEGFA-223	ENST00000523125	CRYZ	Q08257	329 aa	Known RBP	11.31	□□□□□ -0.6
VEGFA-223	ENST00000523125	HEPACAM	Q14CZ8	416 aa		11.31	□□□□□ -0.6
VEGFA-223	ENST00000523125	SPDYA	Q5MJ70	313 aa		11.31	□□□□□ -0.6
VEGFA-223	ENST00000523125	TIGD3	Q6B0B8	471 aa		11.31	□□□□□ -0.6
VEGFA-223	ENST00000523125	FAM71E1	Q6IPT2	247 aa		11.31	□□□□□ -0.6
VEGFA-223	ENST00000523125	SEM1	Q6ZVN7	128 aa		11.31	□□□□□ -0.6
VEGFA-223	ENST00000523125	MED12L	Q86YW9	2145 aa		11.31	□□□□□ -0.6
VEGFA-223	ENST00000523125	ULK2	Q8IYT8	1036 aa		11.31	□□□□□ -0.6
VEGFA-223	ENST00000523125	OR10Q1	Q8NGQ4	319 aa		11.31	□□□□□ -0.6
VEGFA-223	ENST00000523125	RDH11	Q8TC12	318 aa		11.31	□□□□□ -0.6
VEGFA-223	ENST00000523125	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	11.31	□□□□□ -0.6	5e-12	■■■■■ 41.4
VEGFA-223	ENST00000523125	ERP27	Q96DN0	273 aa		11.31	□□□□□ -0.6
VEGFA-223	ENST00000523125	C14orf79	Q96F83	325 aa		11.31	□□□□□ -0.6
VEGFA-223	ENST00000523125	VSTM2L	Q96N03	204 aa		11.31	□□□□□ -0.6
VEGFA-223	ENST00000523125	BTBD9	Q96Q07	612 aa		11.31	□□□□□ -0.6
VEGFA-223	ENST00000523125	TIMP4	Q99727	224 aa		11.31	□□□□□ -0.6
VEGFA-223	ENST00000523125	ALKBH4	Q9NXW9	302 aa		11.31	□□□□□ -0.6
VEGFA-223	ENST00000523125	PRODH2	Q9UF12	536 aa		11.31	□□□□□ -0.6
VEGFA-223	ENST00000523125	C2orf72	A6NCS6	295 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	MYO1G	B0I1T2	1018 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125		H3BQF6	201 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	COPE	O14579	308 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	GNB5	O14775	395 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	PLOD3	O60568	738 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	CDH16	O75309	829 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	TRAPPC6A	O75865	159 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	DDC	P20711	480 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	SSTR2	P30874	369 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	GSTM5	P46439	218 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	ZFP36L2	P47974	494 aa	Known RBP	11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	MASP1	P48740	699 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	CORO7	P57737	925 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	RPP38	P78345	283 aa	Known RBP	11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	ZNF763	Q0D2J5	394 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	C2orf80	Q0P641	193 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	PLCXD2	Q0VAA5	305 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	PCLAF	Q15004	111 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	KIAA0040	Q15053	153 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	VASN	Q6EMK4	673 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	SLC30A6	Q6NXT4	461 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	NPSR1	Q6W5P4	371 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	C10orf107	Q8IVU9	208 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	DMRTC2	Q8IXT2	367 aa	Predicted RBP	11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	SAMD14	Q8IZD0	417 aa	Predicted RBP	11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	C4orf33	Q8N1A6	199 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	WDSUB1	Q8N9V3	476 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	OR7G2	Q8NG99	324 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	OR2W6P	Q8NHA6	318 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	TMBIM1	Q969X1	311 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	SHCBP1L	Q9BZQ2	653 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	METTL7A	Q9H8H3	244 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	GALNT9	Q9HCQ5	603 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	MYNN	Q9NPC7	610 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	PFDN4	Q9NQP4	134 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	TAS2R7	Q9NYW3	318 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	SLC6A5	Q9Y345	797 aa		11.3	□□□□□ -0.6
VEGFA-223	ENST00000523125	C15orf38-AP3S2	A0A0A6YYH1	394 aa		11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	OR6C70	A6NIJ9	312 aa		11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	TSPAN2	O60636	221 aa		11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	ERN1	O75460	977 aa	Known RBP	11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	BCAS2	O75934	225 aa	Predicted RBP	11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	RSL1D1	O76021	490 aa	Known RBP	11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	UROS	P10746	265 aa		11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	ELAVL4	P26378	380 aa	Known RBP	11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	MPI	P34949	423 aa		11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	DLX5	P56178	289 aa		11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	SNTA1	Q13424	505 aa		11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	EIPR1	Q53HC9	387 aa		11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	NHSL2	Q5HYW2	709 aa		11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	CFAP157	Q5JU67	520 aa		11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	WIPI1	Q5MNZ9	446 aa	Predicted RBP	11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	DCST1	Q5T197	706 aa		11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	RIPPLY2	Q5TAB7	128 aa		11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	LIPM	Q5VYY2	423 aa		11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	CLEC6A	Q6EIG7	209 aa		11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	NOXRED1	Q6NXP6	359 aa		11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	ANGPTL8	Q6UXH0	198 aa		11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	LIX1	Q8N485	282 aa		11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	FAM83F	Q8NEG4	500 aa	Predicted RBP	11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	OR1J4	Q8NGS1	313 aa		11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	FAM76A	Q8TAV0	307 aa		11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	RNF138	Q8WVD3	245 aa		11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	SLC35A4	Q96G79	324 aa		11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	EGLN2	Q96KS0	407 aa		11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	COL21A1	Q96P44	957 aa		11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	BBS4	Q96RK4	519 aa		11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	GATA5	Q9BWX5	397 aa	Predicted RBP	11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	OSBPL11	Q9BXB4	747 aa		11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	UGT2B28	Q9BY64	529 aa		11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	PRDM14	Q9GZV8	571 aa		11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	FOLH1B	Q9HBA9	442 aa		11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	POLR3H	Q9Y535	204 aa	Predicted RBP	11.29	□□□□□ -0.6
VEGFA-223	ENST00000523125	PTGDR2	Q9Y5Y4	395 aa		11.29	□□□□□ -0.6

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