RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 MBD3L3A6NE82 208 aaPredicted RBP6.03□□□□□ -1.44
SDCBP-210ENST00000522843 E7ENX8 843 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 AP3B1O00203 1094 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 PSMD3O43242 534 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 GALR3O60755 368 aaPredicted RBP6.03□□□□□ -1.44
SDCBP-210ENST00000522843 MYO1DO94832 1006 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 TOX4O94842 621 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 TTC4O95801 387 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 ABHD2P08910 425 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 ZSCAN5DPP0CG00 497 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 ETS1P14921 441 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 IL10P22301 178 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 CTSSP25774 331 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 HSD17B3P37058 310 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 PIGAP37287 484 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 TRPC1P48995 793 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 PNLIPRP1P54315 467 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 ABATP80404 500 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 TAP2Q03519 686 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 CRYZQ08257 329 aaKnown RBP6.03□□□□□ -1.44
SDCBP-210ENST00000522843 GPS1Q13098 491 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 TSTA3Q13630 321 aaPredicted RBP6.03□□□□□ -1.44
SDCBP-210ENST00000522843 KCNJ11Q14654 390 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 UAP1Q16222 522 aaPredicted RBP6.03□□□□□ -1.44
SDCBP-210ENST00000522843 MBNL2Q5VZF2 373 aaKnown RBP6.03□□□□□ -1.44
SDCBP-210ENST00000522843 NSUN5P2Q63ZY6 315 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 ITPRIPL1Q6GPH6 555 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 TTC23LQ6PF05 361 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 FAM111BQ6SJ93 734 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 PLXDC2Q6UX71 529 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 PPP1R21Q6ZMI0 780 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 Q6ZRM9 215 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 QSOX2Q6ZRP7 698 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 ADCK2Q7Z695 626 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 SLC26A11Q86WA9 606 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 LACC1Q8IV20 430 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 GPALPP1Q8IXQ4 340 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 GSPT2Q8IYD1 628 aaKnown RBP6.03□□□□□ -1.44
SDCBP-210ENST00000522843 RAB42Q8N4Z0 105 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 C9orf106Q8NAJ2 232 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 MBD3L2Q8NHZ7 208 aaPredicted RBP6.03□□□□□ -1.44
SDCBP-210ENST00000522843 NEIL3Q8TAT5 605 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 MCOLN3Q8TDD5 553 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 ZNF480Q8WV37 535 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 NCLNQ969V3 563 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 LRRC39Q96DD0 335 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 PIK3IP1Q96FE7 263 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 ZNF778Q96MU6 729 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 WFIKKN1Q96NZ8 548 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 TIMP4Q99727 224 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 FAM118BQ9BPY3 351 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 SOX7Q9BT81 388 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 RBM24Q9BX46 236 aaKnown RBP6.03□□□□□ -1.44
SDCBP-210ENST00000522843 REG4Q9BYZ8 158 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 PITHD1Q9GZP4 211 aaPredicted RBP6.03□□□□□ -1.44
SDCBP-210ENST00000522843 DPH5Q9H2P9 285 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 PPCSQ9HAB8 311 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 SH2D2AQ9NP31 389 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 MED4Q9NPJ6 270 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 ABCF3Q9NUQ8 709 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 GALPQ9UBC7 116 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 FETUBQ9UGM5 382 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 EIF3LQ9Y262 564 aaKnown RBP6.03□□□□□ -1.44
SDCBP-210ENST00000522843 AAR2Q9Y312 384 aaKnown RBP6.03□□□□□ -1.44
SDCBP-210ENST00000522843 SLC22A7Q9Y694 548 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 DYSFO75923 2080 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 NINQ8N4C6 2090 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 PRR14LQ5THK1 2151 aa6.03□□□□□ -1.44
SDCBP-210ENST00000522843 MAGEB16A2A368 324 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 A8MV72 311 aaPredicted RBP6.02□□□□□ -1.45
SDCBP-210ENST00000522843 AHRRA9YTQ3 701 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 C4orf51C9J302 202 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 WWP2O00308 870 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 GPRIN2O60269 458 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 PSIP1O75475 530 aaKnown RBP6.02□□□□□ -1.45
SDCBP-210ENST00000522843 METTL18O95568 372 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 SLC16A8O95907 504 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 SYF2O95926 243 aaKnown RBP6.02□□□□□ -1.45
SDCBP-210ENST00000522843 IFNB1P01574 187 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 GSTA2P09210 222 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 OPRM1P35372 400 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 MAGEA4P43358 317 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 SLCO1A2P46721 670 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 SESN3P58005 492 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 IL2P60568 153 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 ACVR1Q04771 509 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 FRG1Q14331 258 aaKnown RBP6.02□□□□□ -1.45
SDCBP-210ENST00000522843 ARHGAP19Q14CB8 494 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 TMED2Q15363 201 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 TRIP13Q15645 432 aaPredicted RBP6.02□□□□□ -1.45
SDCBP-210ENST00000522843 CLEC12BQ2HXU8 276 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 ANKRD20A4Q4UJ75 823 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 TNFAIP8L3Q5GJ75 292 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 CTSL3PQ5NE16 218 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 DCST1Q5T197 706 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 RTL4Q6ZR62 310 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 FAM47EQ6ZV65 393 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 LUZP2Q86TE4 346 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 ASPGQ86U10 573 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 ZBTB46Q86UZ6 589 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 180.9 ms