RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 BIRC5O15392 142 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 PLOD3O60568 738 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 TRIM3O75382 744 aaPredicted RBP12.2□□□□□ -0.46
VEGFA-219ENST00000518824 PPM1BO75688 479 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 ZWINTO95229 277 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 ABOP16442 354 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 ENDOUP21128 410 aaKnown RBP12.2□□□□□ -0.46
VEGFA-219ENST00000518824 DRD5P21918 477 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 MPIP34949 423 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 PTGS2P35354 604 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 SERPINB5P36952 375 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 CASP3P42574 277 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 SLC1A6P48664 564 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 MAGOHP61326 146 aaKnown RBP12.2□□□□□ -0.46
VEGFA-219ENST00000518824 KCNJ2P63252 427 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 RBPJQ06330 500 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 BST1Q10588 318 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 HSPB3Q12988 150 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 PDE7AQ13946 482 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 CASP8Q14790 479 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 PTGR1Q14914 329 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 HYAL4Q2M3T9 481 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 IKBIPQ70UQ0 350 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 CD163Q86VB7 1156 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 SLC22A16Q86VW1 577 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 KRTCAP2Q8N6L1 136 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 OR7A2PQ8NGA2 310 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 ITLN2Q8WWU7 325 aaPredicted RBP12.2□□□□□ -0.46
VEGFA-219ENST00000518824 ELP4Q96EB1 424 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 RILPQ96NA2 401 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 DOHHQ9BU89 302 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 SLC6A15Q9H2J7 730 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 ZNF703Q9H7S9 590 aaPredicted RBP12.2□□□□□ -0.46
VEGFA-219ENST00000518824 GALNT9Q9HCQ5 603 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 PNPOQ9NVS9 261 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 FLRT3Q9NZU0 649 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 CNIH4Q9P003 139 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 SH3BP4Q9P0V3 963 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 SPRR3Q9UBC9 169 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 PRODH2Q9UF12 536 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 FRG2CA6NGY1 282 aa12.19□□□□□ -0.46
VEGFA-219ENST00000518824 TMEM114B3SHH9 223 aa12.19□□□□□ -0.46
VEGFA-219ENST00000518824 B4DXG7 233 aa12.19□□□□□ -0.46
VEGFA-219ENST00000518824 NPIPA2E9PIF3 369 aa12.19□□□□□ -0.46
VEGFA-219ENST00000518824 NPIPA3F8WFD2 350 aa12.19□□□□□ -0.46
VEGFA-219ENST00000518824 TO15178 435 aa12.19□□□□□ -0.46
VEGFA-219ENST00000518824 PDPK1O15530 556 aa12.19□□□□□ -0.46
VEGFA-219ENST00000518824 TSPAN2O60636 221 aa12.19□□□□□ -0.46
VEGFA-219ENST00000518824 ERN1O75460 977 aaKnown RBP12.19□□□□□ -0.46
VEGFA-219ENST00000518824 ERLIN1O75477 346 aa12.19□□□□□ -0.46
VEGFA-219ENST00000518824 PSMG1O95456 288 aa12.19□□□□□ -0.46
VEGFA-219ENST00000518824 TPOP07202 933 aa12.19□□□□□ -0.46
VEGFA-219ENST00000518824 MYZAPP0CAP1 466 aa12.19□□□□□ -0.46
VEGFA-219ENST00000518824 NTSP30990 170 aa12.19□□□□□ -0.46
VEGFA-219ENST00000518824 PSG6Q00889 435 aa12.19□□□□□ -0.46
VEGFA-219ENST00000518824 PLCXD2Q0VAA5 305 aa12.19□□□□□ -0.46
VEGFA-219ENST00000518824 IL23RQ5VWK5 629 aa12.19□□□□□ -0.46
VEGFA-219ENST00000518824 BNC2Q6ZN30 1099 aaPredicted RBP12.19□□□□□ -0.46
VEGFA-219ENST00000518824 TRILQ7L0X0 811 aa12.19□□□□□ -0.46
VEGFA-219ENST00000518824 SLC44A2Q8IWA5 706 aaPredicted RBP12.19□□□□□ -0.46
VEGFA-219ENST00000518824 SAMD14Q8IZD0 417 aaPredicted RBP12.19□□□□□ -0.46
VEGFA-219ENST00000518824 FAM109AQ8N4B1 249 aa12.19□□□□□ -0.46
VEGFA-219ENST00000518824 MARVELD2Q8N4S9 558 aa12.19□□□□□ -0.46
VEGFA-219ENST00000518824 OR5M9Q8NGP3 310 aa12.19□□□□□ -0.46
VEGFA-219ENST00000518824 FAM57AQ8TBR7 257 aa12.19□□□□□ -0.46
VEGFA-219ENST00000518824 TUBGCP3Q96CW5 907 aa12.19□□□□□ -0.46
VEGFA-219ENST00000518824 HSPBAP1Q96EW2 488 aa12.19□□□□□ -0.46
VEGFA-219ENST00000518824 PPP3R2Q96LZ3 170 aa12.19□□□□□ -0.46
VEGFA-219ENST00000518824 BTBD9Q96Q07 612 aa12.19□□□□□ -0.46
VEGFA-219ENST00000518824 ANGPTL4Q9BY76 406 aa12.19□□□□□ -0.46
VEGFA-219ENST00000518824 ZFP64Q9NPA5 681 aa12.19□□□□□ -0.46
VEGFA-219ENST00000518824 C19orf53Q9UNZ5 99 aaPredicted RBP12.19□□□□□ -0.46
VEGFA-219ENST00000518824 CFL2Q9Y281 166 aa12.19□□□□□ -0.46
VEGFA-219ENST00000518824 WBP11Q9Y2W2 641 aaKnown RBP12.19□□□□□ -0.46
VEGFA-219ENST00000518824 MEMO1Q9Y316 297 aa12.19□□□□□ -0.46
VEGFA-219ENST00000518824 MED12Q93074 2177 aa12.19□□□□□ -0.46
VEGFA-219ENST00000518824 A0A087WV62 115 aa12.18□□□□□ -0.46
VEGFA-219ENST00000518824 ANKRD33BA6NCL7 494 aa12.18□□□□□ -0.46
VEGFA-219ENST00000518824 ACOT7O00154 380 aa12.18□□□□□ -0.46
VEGFA-219ENST00000518824 PLOD2O00469 737 aa12.18□□□□□ -0.46
VEGFA-219ENST00000518824 TP53I11O14683 189 aa12.18□□□□□ -0.46
VEGFA-219ENST00000518824 GNB5O14775 395 aa12.18□□□□□ -0.46
VEGFA-219ENST00000518824 TBX19O60806 448 aa12.18□□□□□ -0.46
VEGFA-219ENST00000518824 REM1O75628 298 aa12.18□□□□□ -0.46
VEGFA-219ENST00000518824 IGHG3P01860 377 aa12.18□□□□□ -0.46
VEGFA-219ENST00000518824 LAMP1P11279 417 aa12.18□□□□□ -0.46
VEGFA-219ENST00000518824 G6PDP11413 515 aa12.18□□□□□ -0.46
VEGFA-219ENST00000518824 GRNP28799 593 aaKnown RBP12.18□□□□□ -0.46
VEGFA-219ENST00000518824 FRKP42685 505 aaPredicted RBP12.18□□□□□ -0.46
VEGFA-219ENST00000518824 TRPC1P48995 793 aa12.18□□□□□ -0.46
VEGFA-219ENST00000518824 NRG3P56975 720 aa12.18□□□□□ -0.46
VEGFA-219ENST00000518824 ZNF155Q12901 538 aaPredicted RBP12.18□□□□□ -0.46
VEGFA-219ENST00000518824 STX3Q13277 289 aa12.18□□□□□ -0.46
VEGFA-219ENST00000518824 ATP6AP1LQ52LC2 224 aa12.18□□□□□ -0.46
VEGFA-219ENST00000518824 ZNF787Q6DD87 383 aa12.18□□□□□ -0.46
VEGFA-219ENST00000518824 MAMDC2Q7Z304 686 aaPredicted RBP12.18□□□□□ -0.46
VEGFA-219ENST00000518824 DND1Q8IYX4 353 aaKnown RBP12.18□□□□□ -0.46
VEGFA-219ENST00000518824 SLC34A3Q8N130 599 aa12.18□□□□□ -0.46
VEGFA-219ENST00000518824 OR2L13Q8N349 312 aa12.18□□□□□ -0.46
VEGFA-219ENST00000518824 FNDC5Q8NAU1 212 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms