RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 ELMO1Q92556 727 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SEPT8Q92599 483 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 OSTF1Q92882 214 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 RAB1CQ92928 201 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 TNFRSF14Q92956 283 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLCO2A1Q92959 643 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 GLYATL1Q969I3 302 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC38A4Q969I6 547 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 MCHR2Q969V1 340 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 MYLPFQ96A32 169 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 RFT1Q96AA3 541 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 PNPLA2Q96AD5 504 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 TMEM45BQ96B21 275 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 TMEM18Q96B42 140 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 PYCR2Q96C36 320 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 CCDC124Q96CT7 223 aaKnown RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 RAB39BQ96DA2 213 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 ECHDC3Q96DC8 303 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 THOC1Q96FV9 657 aaKnown RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 CHMP6Q96FZ7 201 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 TMEM19Q96HH6 336 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 GRAMD2BQ96HH9 432 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SENP5Q96HI0 755 aaPredicted RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SH3YL1Q96HL8 342 aaPredicted RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 HPDLQ96IR7 371 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZNF479Q96JC4 524 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 AKR1E2Q96JD6 320 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 FOXN4Q96NZ1 517 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 CASD1Q96PB1 797 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 TGM7Q96PF1 710 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 DEFB118Q96PH6 123 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 MTMR9Q96QG7 549 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 FCRL5Q96RD9 977 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 TESK2Q96S53 571 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 CCNL2Q96S94 520 aaPredicted RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 CCT8L2Q96SF2 557 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 CYTH2Q99418 400 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 S1PR3Q99500 378 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 NDNQ99608 321 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 NPAS2Q99743 824 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC29A1Q99808 456 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 KXD1Q9BQD3 176 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 RTP3Q9BQQ7 232 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC30A2Q9BRI3 323 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 LLPHQ9BRT6 129 aaKnown RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 TTYH2Q9BSA4 534 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 TUBGCP2Q9BSJ2 902 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 FEM1AQ9BSK4 669 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 UBAC1Q9BSL1 405 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 CCM2Q9BSQ5 444 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 HAUS8Q9BT25 410 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 CHRDL1Q9BU40 450 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 C20orf24Q9BUV8 137 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 NTMT1Q9BV86 223 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 TRMT61BQ9BVS5 477 aaKnown RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 FUNDC2Q9BWH2 189 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SPZ1Q9BXG8 430 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 NUSAP1Q9BXS6 441 aaKnown RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 TDRD1Q9BXT4 1180 aaKnown RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 TEX101Q9BY14 249 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 GSDMCQ9BYG8 508 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC2A11Q9BYW1 496 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 FRMD8Q9BZ67 464 aaPredicted RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 PRRG4Q9BZD6 226 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 ROPN1BQ9BZX4 212 aaPredicted RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 MIS12Q9H081 205 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 ILKAPQ9H0C8 392 aaPredicted RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 WWP1Q9H0M0 922 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 MAGT1Q9H0U3 335 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 MTIF3Q9H2K0 278 aaKnown RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 KCNN2Q9H2S1 579 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 DPAGT1Q9H3H5 408 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 GAL3ST2Q9H3Q3 398 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 RIMS4Q9H426 269 aaPredicted RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLA2Q9H6Q3 261 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 ESRP2Q9H6T0 727 aaKnown RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 EGLN3Q9H6Z9 239 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 LRRC19Q9H756 370 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 DCTPP1Q9H773 170 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 AAMDCQ9H7C9 122 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 MVB12BQ9H7P6 319 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 Q9H8V8 135 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 RNF121Q9H920 327 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 PSTPIP2Q9H939 334 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 UCK1Q9HA47 277 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 TBC1D17Q9HA65 648 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 CALHM2Q9HA72 323 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 ELOVL3Q9HB03 270 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SEBOXQ9HB31 216 aaPredicted RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 CYP3A43Q9HB55 503 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 LPAR2Q9HBW0 351 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 LRRC4Q9HBW1 653 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 MCCC2Q9HCC0 563 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZNF160Q9HCG1 818 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 MRPS30Q9NP92 439 aaKnown RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 ACKR4Q9NPB9 350 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SPAG4Q9NPE6 437 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 DMAP1Q9NPF5 467 aaPredicted RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 PNRC2Q9NPJ4 139 aaKnown RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZNF302Q9NR11 478 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms