RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 A0A0G2JN53 185 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 PRORSD1PA6NEY8 169 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 TGFBR3LH3BV60 316 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 FXYD1O00168 92 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 CYR61O00622 381 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 ANKRD28O15084 1053 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 SLC19A2O60779 497 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 DNAJA2O60884 412 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 SLC25A12O75746 678 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 RSL1D1O76021 490 aaKnown RBP9.15□□□□□ -0.95
CCL28-203ENST00000513525 WISP2O76076 250 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 C8BP07358 591 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 ST13P50502 369 aaKnown RBP9.15□□□□□ -0.95
CCL28-203ENST00000513525 HLCSP50747 726 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 GPR143P51810 404 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 SLC7A2P52569 658 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 HNRNPFP52597 415 aaKnown RBP9.15□□□□□ -0.95
CCL28-203ENST00000513525 LIM2P55344 173 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 NME5P56597 212 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 UFM1P61960 85 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 MS4A2Q01362 244 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 ALDH6A1Q02252 535 aaKnown RBP9.15□□□□□ -0.95
CCL28-203ENST00000513525 SRSF11Q05519 484 aaKnown RBP9.15□□□□□ -0.95
CCL28-203ENST00000513525 TGM3Q08188 693 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 HIST2H2ACQ16777 129 aaPredicted RBP9.15□□□□□ -0.95
CCL28-203ENST00000513525 IMPG1Q17R60 797 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 IL23RQ5VWK5 629 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 LIPJQ5W064 366 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 HIST2H2AA3Q6FI13 130 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 ADNP2Q6IQ32 1131 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 SIAH3Q8IW03 269 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 PQLC1Q8N2U9 271 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 POGLUT1Q8NBL1 392 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 TMEM52Q8NDY8 209 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 SRFBP1Q8NEF9 429 aaKnown RBP9.15□□□□□ -0.95
CCL28-203ENST00000513525 BHLHE22Q8NFJ8 381 aaPredicted RBP9.15□□□□□ -0.95
CCL28-203ENST00000513525 ITLN2Q8WWU7 325 aaPredicted RBP9.15□□□□□ -0.95
CCL28-203ENST00000513525 LRRC58Q96CX6 371 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 VMP1Q96GC9 406 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 CCDC120Q96HB5 630 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 ZNF570Q96NI8 536 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 ZNF184Q99676 751 aaPredicted RBP9.15□□□□□ -0.95
CCL28-203ENST00000513525 C1orf50Q9BV19 199 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 MS4A8Q9BY19 250 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 TRIM15Q9C019 465 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 ROGDIQ9GZN7 287 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 COPS7BQ9H9Q2 264 aaPredicted RBP9.15□□□□□ -0.95
CCL28-203ENST00000513525 LRTM1Q9HBL6 345 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 ADAP2Q9NPF8 381 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 PRDM7Q9NQW5 492 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 C1orf109Q9NX04 203 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 ZNF223Q9UK11 482 aaPredicted RBP9.15□□□□□ -0.95
CCL28-203ENST00000513525 LRCH1Q9Y2L9 728 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 TMED5Q9Y3A6 229 aa9.15□□□□□ -0.95
CCL28-203ENST00000513525 KLF2Q9Y5W3 355 aaPredicted RBP9.15□□□□□ -0.95
CCL28-203ENST00000513525 CSMD1Q96PZ7 3565 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 TRBV11-1A0A0K0K1C0 115 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 A8MUA0 341 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 CCL21O00585 134 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 MYO1DO94832 1006 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 SCELO95171 688 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 G6PDP11413 515 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 PRPS2P11908 318 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 SLC6A2P23975 617 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 CERS1P27544 350 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 MAPK1P28482 360 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 SERPINB1P30740 379 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 PLA2G16P53816 162 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 CASP6P55212 293 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 EEFSECP57772 596 aaKnown RBP9.14□□□□□ -0.95
CCL28-203ENST00000513525 IRF8Q02556 426 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 SLC13A2Q13183 592 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 CHIT1Q13231 466 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 NFYCQ13952 458 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 ELAVL1Q15717 326 aaKnown RBP9.14□□□□□ -0.95
CCL28-203ENST00000513525 MAPKAPK3Q16644 382 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 RFTN2Q52LD8 501 aaPredicted RBP9.14□□□□□ -0.95
CCL28-203ENST00000513525 C10orf62Q5T681 223 aaPredicted RBP9.14□□□□□ -0.95
CCL28-203ENST00000513525 RPTNQ6XPR3 784 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.14□□□□□ -0.95
CCL28-203ENST00000513525 SLC15A3Q8IY34 581 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 LAS2Q8IYD9 372 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 ZNF808Q8N4W9 903 aaPredicted RBP9.14□□□□□ -0.95
CCL28-203ENST00000513525 FAM47BQ8NA70 645 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 HIPK4Q8NE63 616 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 UBE2E3Q969T4 207 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 TMEM125Q96AQ2 219 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 CMTM7Q96FZ5 175 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 METTL2AQ96IZ6 378 aaKnown RBP9.14□□□□□ -0.95
CCL28-203ENST00000513525 TEX37Q96LM6 180 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 KCNC2Q96PR1 638 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 TBCDQ9BTW9 1192 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 ELOVL6Q9H5J4 265 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 LYRM4Q9HD34 91 aa9.14□□□□□ -0.95
CCL28-203ENST00000513525 KLF13Q9Y2Y9 288 aaPredicted RBP9.14□□□□□ -0.95
CCL28-203ENST00000513525 POLR3HQ9Y535 204 aaPredicted RBP9.14□□□□□ -0.95
CCL28-203ENST00000513525 PRSS51A0A1B0GVH4 220 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 TCRBV3S1A0A5B6 114 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 AQP12BA6NM10 295 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 FIGNL2A6NMB9 653 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms