RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 ALOX12P18054 663 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 AGXTP21549 392 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 FOLR3P41439 243 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 MVDP53602 400 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 ARF3P61204 181 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 FOXD4Q12950 439 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 TMTC4Q5T4D3 741 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 NDUFAF5Q5TEU4 345 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 YOD1Q5VVQ6 348 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 B3GNTL1Q67FW5 361 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 ZNF324BQ6AW86 544 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 SLC48A1Q6P1K1 146 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 NCCRP1Q6ZVX7 275 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 PLD3Q8IV08 490 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 SLC30A8Q8IWU4 369 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 MICU2Q8IYU8 434 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 EID3Q8N140 333 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 METTL25Q8N6Q8 603 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 CHDHQ8NE62 594 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 OR52N2Q8NGI0 321 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 OR1N1Q8NGS0 311 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 OR8K5Q8NH50 307 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 OR1L3Q8NH93 324 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 ZFP28Q8NHY6 868 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 SFXN5Q8TD22 340 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 SLC26A7Q8TE54 656 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 MOAP1Q96BY2 351 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 LRGUKQ96M69 825 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 SMR3AQ99954 134 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 C17orf62Q9BQA9 187 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 INPP5KQ9BT40 448 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 KLHL31Q9H511 634 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 IKZF5Q9H5V7 419 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 TMEM38AQ9H6F2 299 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 EPS8L2Q9H6S3 715 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 IL1RL2Q9HB29 575 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 C8orf4Q9NR00 106 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 SLC6A13Q9NSD5 602 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 KCMF1Q9P0J7 381 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 SH3BP4Q9P0V3 963 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 NTMQ9P121 344 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 GPN3Q9UHW5 284 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 CNOT11Q9UKZ1 510 aaKnown RBP9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 PSME2Q9UL46 239 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 DAPP1Q9UN19 280 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 PCDHGB4Q9UN71 923 aa9.77□□□□□ -0.85
PDLIM5-217ENST00000512274 A0A1W2PRB8 838 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 MYO1GB0I1T2 1018 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 H0YJX3 145 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 SAP18O00422 153 aaKnown RBP9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 RTCAO00442 366 aaKnown RBP9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 PDPK1O15530 556 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 P2RX6O15547 441 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 GALR3O60755 368 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 ZBTB11O95625 1053 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 ANP32DO95626 131 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 IGHEP01854 428 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 FCGR1AP12314 374 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 ST6GAL1P15907 406 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 ATP6V1B2P21281 511 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 CDH3P22223 829 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 UQCRC2P22695 453 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 DNAJA1P31689 397 aaKnown RBP9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 BUD31P41223 144 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 CDKN2CP42773 168 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 GCGRP47871 477 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 SMSP52788 366 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 PLA2G16P53816 162 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 SOX8P57073 446 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 MTPNP58546 118 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 HBA1P69905 142 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 TNFRSF17Q02223 184 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 AIMP2Q13155 320 aaKnown RBP9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 SLAMF1Q13291 335 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 SELPLGQ14242 412 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 AGAP7PQ5VUJ5 663 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 LINC00696Q6ZRV3 163 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 PRIMA1Q86XR5 153 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 PQLC1Q8N2U9 271 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 DTWD1Q8N5C7 304 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 CSNK1A1LQ8N752 337 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 RNF148Q8N7C7 305 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 MIPOL1Q8TD10 442 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 NUDT8Q8WV74 236 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 NR4A3Q92570 626 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 GFM2Q969S9 779 aaKnown RBP9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 NEURL3Q96EH8 262 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 MVB12AQ96EY5 273 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 C10orf90Q96M02 699 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 RNF145Q96MT1 663 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 AGAP4Q96P64 663 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 TAAR6Q96RI8 345 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 SPOCK3Q9BQ16 436 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 NDC1Q9BTX1 674 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 THUMPD3Q9BV44 507 aaKnown RBP9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 SORBS1Q9BX66 1292 aaKnown RBP9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 PCDHAC1Q9H158 963 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 VCX3BQ9H321 246 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 MAGIXQ9H6Y5 334 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms