RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 THNSL1Q8IYQ7 743 aa3.69□□□□□ -1.82
TOPBP1-206ENST00000508524 UXS1Q8NBZ7 420 aa3.69□□□□□ -1.82
TOPBP1-206ENST00000508524 CORO2AQ92828 525 aa3.69□□□□□ -1.82
TOPBP1-206ENST00000508524 LINC00167Q96N53 147 aa3.69□□□□□ -1.82
TOPBP1-206ENST00000508524 C17orf62Q9BQA9 187 aa3.69□□□□□ -1.82
TOPBP1-206ENST00000508524 THUMPD2Q9BTF0 503 aaKnown RBP3.69□□□□□ -1.82
TOPBP1-206ENST00000508524 AP1M1Q9BXS5 423 aa3.69□□□□□ -1.82
TOPBP1-206ENST00000508524 ASH1LQ9NR48 2969 aaKnown RBP3.69□□□□□ -1.82
TOPBP1-206ENST00000508524 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.69□□□□□ -1.82
TOPBP1-206ENST00000508524 MIS18AQ9NYP9 233 aa3.69□□□□□ -1.82
TOPBP1-206ENST00000508524 GIMAP2Q9UG22 337 aa3.69□□□□□ -1.82
TOPBP1-206ENST00000508524 KIAA1217Q5T5P2 1943 aa3.69□□□□□ -1.82
TOPBP1-206ENST00000508524 FRYQ5TBA9 3013 aa3.69□□□□□ -1.82
TOPBP1-206ENST00000508524 SPEGQ15772 3267 aa3.69□□□□□ -1.82
TOPBP1-206ENST00000508524 FAM205AQ6ZU69 1335 aa3.69□□□□□ -1.82
TOPBP1-206ENST00000508524 CCSO14618 274 aa3.68□□□□□ -1.82
TOPBP1-206ENST00000508524 MCF2LO15068 1137 aa3.68□□□□□ -1.82
TOPBP1-206ENST00000508524 PDGFBP01127 241 aaPredicted RBP3.68□□□□□ -1.82
TOPBP1-206ENST00000508524 ATP6V1B1P15313 513 aa3.68□□□□□ -1.82
TOPBP1-206ENST00000508524 OR1D2P34982 312 aa3.68□□□□□ -1.82
TOPBP1-206ENST00000508524 PRMT2P55345 433 aa3.68□□□□□ -1.82
TOPBP1-206ENST00000508524 RPL27P61353 136 aaKnown RBP3.68□□□□□ -1.82
TOPBP1-206ENST00000508524 SLC3A1Q07837 685 aa3.68□□□□□ -1.82
TOPBP1-206ENST00000508524 MFGE8Q08431 387 aaPredicted RBP3.68□□□□□ -1.82
TOPBP1-206ENST00000508524 IQCCQ4KMZ1 466 aa3.68□□□□□ -1.82
TOPBP1-206ENST00000508524 TMEM31Q5JXX7 168 aa3.68□□□□□ -1.82
TOPBP1-206ENST00000508524 KRTAP5-5Q701N2 237 aaPredicted RBP3.68□□□□□ -1.82
TOPBP1-206ENST00000508524 RAPH1Q70E73 1250 aa3.68□□□□□ -1.82
TOPBP1-206ENST00000508524 METTL23Q86XA0 190 aa3.68□□□□□ -1.82
TOPBP1-206ENST00000508524 APOBEC3FQ8IUX4 373 aaKnown RBP3.68□□□□□ -1.82
TOPBP1-206ENST00000508524 SLC22A18ASQ8N1D0 253 aa3.68□□□□□ -1.82
TOPBP1-206ENST00000508524 CERS5Q8N5B7 392 aa3.68□□□□□ -1.82
TOPBP1-206ENST00000508524 ZBED6CLQ96FA7 236 aaPredicted RBP3.68□□□□□ -1.82
TOPBP1-206ENST00000508524 GBP5Q96PP8 586 aa3.68□□□□□ -1.82
TOPBP1-206ENST00000508524 SIGLEC12Q96PQ1 595 aa3.68□□□□□ -1.82
TOPBP1-206ENST00000508524 UTP14AQ9BVJ6 771 aaKnown RBP3.68□□□□□ -1.82
TOPBP1-206ENST00000508524 ZNF275Q9NSD4 429 aaPredicted RBP3.68□□□□□ -1.82
TOPBP1-206ENST00000508524 MAST2Q6P0Q8 1798 aa3.68□□□□□ -1.82
TOPBP1-206ENST00000508524 FAM186AA6NE01 2351 aa3.68□□□□□ -1.82
TOPBP1-206ENST00000508524 DOCK3Q8IZD9 2030 aa3.68□□□□□ -1.82
TOPBP1-206ENST00000508524 CEP250Q9BV73 2442 aa3.68□□□□□ -1.82
TOPBP1-206ENST00000508524 COL1A1P02452 1464 aaPredicted RBP3.67□□□□□ -1.82
TOPBP1-206ENST00000508524 CEP295Q9C0D2 2601 aa3.67□□□□□ -1.82
TOPBP1-206ENST00000508524 CSO75390 466 aaKnown RBP3.67□□□□□ -1.82
TOPBP1-206ENST00000508524 OR6A2O95222 327 aa3.67□□□□□ -1.82
TOPBP1-206ENST00000508524 IFNAR1P17181 557 aa3.67□□□□□ -1.82
TOPBP1-206ENST00000508524 GLRA1P23415 457 aa3.67□□□□□ -1.82
TOPBP1-206ENST00000508524 SOAT1P35610 550 aa3.67□□□□□ -1.82
TOPBP1-206ENST00000508524 MEOX2P50222 304 aa3.67□□□□□ -1.82
TOPBP1-206ENST00000508524 CCR4P51679 360 aa3.67□□□□□ -1.82
TOPBP1-206ENST00000508524 KCTD2Q14681 263 aa3.67□□□□□ -1.82
TOPBP1-206ENST00000508524 PSMD6Q15008 389 aa3.67□□□□□ -1.82
TOPBP1-206ENST00000508524 WDR25Q64LD2 544 aaPredicted RBP3.67□□□□□ -1.82
TOPBP1-206ENST00000508524 CAPN13Q6MZZ7 669 aaPredicted RBP3.67□□□□□ -1.82
TOPBP1-206ENST00000508524 ALKBH5Q6P6C2 394 aaKnown RBP3.67□□□□□ -1.82
TOPBP1-206ENST00000508524 PODNL1Q6PEZ8 512 aa3.67□□□□□ -1.82
TOPBP1-206ENST00000508524 ZNF525Q8N782 197 aa3.67□□□□□ -1.82
TOPBP1-206ENST00000508524 OR1K1Q8NGR3 316 aa3.67□□□□□ -1.82
TOPBP1-206ENST00000508524 NUS1Q96E22 293 aa3.67□□□□□ -1.82
TOPBP1-206ENST00000508524 PHYHIPLQ96FC7 376 aa3.67□□□□□ -1.82
TOPBP1-206ENST00000508524 RAB40CQ96S21 281 aa3.67□□□□□ -1.82
TOPBP1-206ENST00000508524 C11orf49Q9H6J7 331 aa3.67□□□□□ -1.82
TOPBP1-206ENST00000508524 PDFQ9HBH1 243 aa3.67□□□□□ -1.82
TOPBP1-206ENST00000508524 AMBNQ9NP70 447 aa3.67□□□□□ -1.82
TOPBP1-206ENST00000508524 IL17CQ9P0M4 197 aa3.67□□□□□ -1.82
TOPBP1-206ENST00000508524 RCOR3Q9P2K3 495 aaPredicted RBP3.67□□□□□ -1.82
TOPBP1-206ENST00000508524 RNF24Q9Y225 148 aa3.67□□□□□ -1.82
TOPBP1-206ENST00000508524 POMT1Q9Y6A1 747 aa3.67□□□□□ -1.82
TOPBP1-206ENST00000508524 PRRC2BQ5JSZ5 2229 aaKnown RBP3.67□□□□□ -1.82
TOPBP1-206ENST00000508524 EP300Q09472 2414 aaPredicted RBP3.66□□□□□ -1.82
TOPBP1-206ENST00000508524 NAV2Q8IVL1 2488 aa3.66□□□□□ -1.82
TOPBP1-206ENST00000508524 IGKV6D-21A0A0A0MT36 114 aa3.66□□□□□ -1.82
TOPBP1-206ENST00000508524 ATP6AP2A0A1C7CYW4 349 aa3.66□□□□□ -1.82
TOPBP1-206ENST00000508524 SAP18O00422 153 aaKnown RBP3.66□□□□□ -1.82
TOPBP1-206ENST00000508524 IFIT3O14879 490 aaKnown RBP3.66□□□□□ -1.82
TOPBP1-206ENST00000508524 DUSP11O75319 330 aaKnown RBP3.66□□□□□ -1.82
TOPBP1-206ENST00000508524 HMGCLP35914 325 aa3.66□□□□□ -1.82
TOPBP1-206ENST00000508524 KCNJ1P48048 391 aa3.66□□□□□ -1.82
TOPBP1-206ENST00000508524 AKAP17AQ02040 695 aaKnown RBP3.66□□□□□ -1.82
TOPBP1-206ENST00000508524 PARP10Q53GL7 1025 aa3.66□□□□□ -1.82
TOPBP1-206ENST00000508524 CYP4V2Q6ZWL3 525 aaPredicted RBP3.66□□□□□ -1.82
TOPBP1-206ENST00000508524 PPP1R42Q7Z4L9 355 aa3.66□□□□□ -1.82
TOPBP1-206ENST00000508524 ZNF444Q8N0Y2 327 aaPredicted RBP3.66□□□□□ -1.82
TOPBP1-206ENST00000508524 IDI2Q9BXS1 227 aa3.66□□□□□ -1.82
TOPBP1-206ENST00000508524 EDEM3Q9BZQ6 932 aa3.66□□□□□ -1.82
TOPBP1-206ENST00000508524 VNN3Q9NY84 501 aa3.66□□□□□ -1.82
TOPBP1-206ENST00000508524 EXOC6BQ9Y2D4 811 aa3.66□□□□□ -1.82
TOPBP1-206ENST00000508524 MGAMO43451 1857 aa3.66□□□□□ -1.82
TOPBP1-206ENST00000508524 ASPMQ8IZT6 3477 aa3.65□□□□□ -1.82
TOPBP1-206ENST00000508524 E7ENQ6 273 aa3.65□□□□□ -1.83
TOPBP1-206ENST00000508524 H0Y9J4 135 aa3.65□□□□□ -1.83
TOPBP1-206ENST00000508524 H0YIG0 161 aa3.65□□□□□ -1.83
TOPBP1-206ENST00000508524 SYT7O43581 403 aa3.65□□□□□ -1.83
TOPBP1-206ENST00000508524 MDH2P40926 338 aaKnown RBP3.65□□□□□ -1.83
TOPBP1-206ENST00000508524 RPS8P62241 208 aaKnown RBP3.65□□□□□ -1.83
TOPBP1-206ENST00000508524 C14orf28Q4W4Y0 310 aa3.65□□□□□ -1.83
TOPBP1-206ENST00000508524 MPP7Q5T2T1 576 aa3.65□□□□□ -1.83
TOPBP1-206ENST00000508524 AGAP6Q5VW22 663 aa3.65□□□□□ -1.83
TOPBP1-206ENST00000508524 GLRX5Q86SX6 157 aa3.65□□□□□ -1.83
TOPBP1-206ENST00000508524 PRR22Q8IZ63 422 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms