RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 SYCE1LA8MT33 242 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 NCF1CA8MVU1 366 aaPredicted RBP7.48□□□□□ -1.21
SCN1A-207ENST00000507401 EVPLLA8MZ36 301 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 K7EPI3 171 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 CLDN4O14493 209 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 PHGDHO43175 533 aaKnown RBP7.48□□□□□ -1.21
SCN1A-207ENST00000507401 CDC123O75794 336 aaPredicted RBP7.48□□□□□ -1.21
SCN1A-207ENST00000507401 RSL1D1O76021 490 aaKnown RBP7.48□□□□□ -1.21
SCN1A-207ENST00000507401 S100BP04271 92 aaPredicted RBP7.48□□□□□ -1.21
SCN1A-207ENST00000507401 STSP08842 583 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 SLC35E2BP0CK96 405 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 NCF1P14598 390 aaPredicted RBP7.48□□□□□ -1.21
SCN1A-207ENST00000507401 IL12AP29459 219 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 CD96P40200 585 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 HNF4AP41235 474 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 HSPA7P48741 367 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 IDH3AP50213 366 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 PER3P56645 1201 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 OLR1P78380 273 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 BTN3A2P78410 334 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 BTG2P78543 158 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 TGM3Q08188 693 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 KLF10Q13118 480 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 DOC2AQ14183 400 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 SLBPQ14493 270 aaKnown RBP eCLIP7.48□□□□□ -1.21
SCN1A-207ENST00000507401 SWI5Q1ZZU3 235 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 C18orf21Q32NC0 220 aaPredicted RBP7.48□□□□□ -1.21
SCN1A-207ENST00000507401 LSM12Q3MHD2 195 aaKnown RBP7.48□□□□□ -1.21
SCN1A-207ENST00000507401 XKR6Q5GH73 641 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 TOR1AIP1Q5JTV8 583 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 METTL2BQ6P1Q9 378 aaKnown RBP7.48□□□□□ -1.21
SCN1A-207ENST00000507401 TUBA3EQ6PEY2 450 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 TTC33Q6PID6 262 aaPredicted RBP7.48□□□□□ -1.21
SCN1A-207ENST00000507401 EPGNQ6UW88 154 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 LRRC70Q7Z2Q7 622 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 AMIGO2Q86SJ2 522 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 ZNF595Q8IYB9 648 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 BEST3Q8N1M1 668 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 CA13Q8N1Q1 262 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 PIK3C3Q8NEB9 887 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 NFAM1Q8NET5 270 aaPredicted RBP7.48□□□□□ -1.21
SCN1A-207ENST00000507401 OR2L5Q8NG80 312 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 ANGPTL6Q8NI99 470 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 ADAMTS18Q8TE60 1221 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 TFAP2CQ92754 450 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 TSLPQ969D9 159 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 RELTQ969Z4 430 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 TAMM41Q96BW9 452 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 QRFPRQ96P65 431 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 SERINC2Q96SA4 455 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 TMEM79Q9BSE2 394 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 ROGDIQ9GZN7 287 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 REXO4Q9GZR2 422 aaKnown RBP7.48□□□□□ -1.21
SCN1A-207ENST00000507401 AICDAQ9GZX7 198 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 TRIM45Q9H8W5 580 aaPredicted RBP7.48□□□□□ -1.21
SCN1A-207ENST00000507401 WWOXQ9NZC7 414 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 NUDT4Q9NZJ9 180 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 NPAP1Q9NZP6 1156 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 CD274Q9NZQ7 290 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 ADGRE2Q9UHX3 823 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 PSME2Q9UL46 239 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 RNF112Q9ULX5 631 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 MRPS33Q9Y291 106 aaKnown RBP7.48□□□□□ -1.21
SCN1A-207ENST00000507401 ZGRF1Q86YA3 2104 aa7.48□□□□□ -1.21
SCN1A-207ENST00000507401 CENPEQ02224 2701 aa7.47□□□□□ -1.21
SCN1A-207ENST00000507401 A0A087X1B8 175 aa7.47□□□□□ -1.21
SCN1A-207ENST00000507401 AQP12BA6NM10 295 aa7.47□□□□□ -1.21
SCN1A-207ENST00000507401 FAM227AF5H4B4 570 aa7.47□□□□□ -1.21
SCN1A-207ENST00000507401 H0YAE9 185 aa7.47□□□□□ -1.21
SCN1A-207ENST00000507401 H3BMQ9 156 aa7.47□□□□□ -1.21
SCN1A-207ENST00000507401 ACOX3O15254 700 aa7.47□□□□□ -1.21
SCN1A-207ENST00000507401 MAGEB3O15480 346 aa7.47□□□□□ -1.21
SCN1A-207ENST00000507401 LRRTM2O43300 516 aa7.47□□□□□ -1.21
SCN1A-207ENST00000507401 ERI3O43414 337 aaKnown RBP7.47□□□□□ -1.21
SCN1A-207ENST00000507401 B3GALT2O43825 422 aa7.47□□□□□ -1.21
SCN1A-207ENST00000507401 PRAMEF4O60810 478 aa7.47□□□□□ -1.21
SCN1A-207ENST00000507401 CTNSO60931 367 aa7.47□□□□□ -1.21
SCN1A-207ENST00000507401 KERAO60938 352 aa7.47□□□□□ -1.21
SCN1A-207ENST00000507401 TBX6O95947 436 aaPredicted RBP7.47□□□□□ -1.21
SCN1A-207ENST00000507401 B3GALT4O96024 378 aa7.47□□□□□ -1.21
SCN1A-207ENST00000507401 SP1P08047 785 aa7.47□□□□□ -1.21
SCN1A-207ENST00000507401 LTA4HP09960 611 aaKnown RBP7.47□□□□□ -1.21
SCN1A-207ENST00000507401 TFEBP19484 476 aa7.47□□□□□ -1.21
SCN1A-207ENST00000507401 SERPINB1P30740 379 aa7.47□□□□□ -1.21
SCN1A-207ENST00000507401 TRHRP34981 398 aaPredicted RBP7.47□□□□□ -1.21
SCN1A-207ENST00000507401 HLCSP50747 726 aa7.47□□□□□ -1.21
SCN1A-207ENST00000507401 TDGF1P3P51864 188 aa7.47□□□□□ -1.21
SCN1A-207ENST00000507401 ARFIP1P53367 373 aa7.47□□□□□ -1.21
SCN1A-207ENST00000507401 ABCE1P61221 599 aaKnown RBP7.47□□□□□ -1.21
SCN1A-207ENST00000507401 IRF8Q02556 426 aa7.47□□□□□ -1.21
SCN1A-207ENST00000507401 EPS8Q12929 822 aa7.47□□□□□ -1.21
SCN1A-207ENST00000507401 BIKQ13323 160 aa7.47□□□□□ -1.21
SCN1A-207ENST00000507401 ART3Q13508 389 aa7.47□□□□□ -1.21
SCN1A-207ENST00000507401 RUNX2Q13950 521 aa7.47□□□□□ -1.21
SCN1A-207ENST00000507401 SELPLGQ14242 412 aa7.47□□□□□ -1.21
SCN1A-207ENST00000507401 TRIM25Q14258 630 aaKnown RBP7.47□□□□□ -1.21
SCN1A-207ENST00000507401 EFTUD2Q15029 972 aaKnown RBP eCLIP7.47□□□□□ -1.21
SCN1A-207ENST00000507401 ACAP2Q15057 778 aa7.47□□□□□ -1.21
SCN1A-207ENST00000507401 FAM83EQ2M2I3 478 aa7.47□□□□□ -1.21
SCN1A-207ENST00000507401 TMEM35AQ53FP2 167 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 295.3 ms