RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 TMEM200AQ86VY9 491 aa13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 KIF18BQ86Y91 864 aa13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 FAM9CQ8IZT9 166 aa13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 RDH11Q8TC12 318 aa13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 ZPLD1Q8TCW7 415 aa13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 RNASE6Q93091 150 aaKnown RBP13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 ABTB1Q969K4 478 aaPredicted RBP13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 COL21A1Q96P44 957 aa13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 GNRHR2Q96P88 292 aa13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 BTBD9Q96Q07 612 aa13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 ACPTQ9BZG2 426 aa13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 IQCGQ9H095 443 aaKnown RBP13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 ACBD3Q9H3P7 528 aa13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 SLC35C2Q9NQQ7 365 aa13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 TAS2R9Q9NYW1 312 aa13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 SENP1Q9P0U3 644 aa13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 ITGB1BP2Q9UKP3 347 aa13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 MRPS18CQ9Y3D5 142 aaKnown RBP13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 L3MBTL1Q9Y468 752 aa13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 CCDC168Q8NDH2 2452 aa13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 TTC36A6NLP5 189 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 GNB5O14775 395 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 ICOSLGO75144 302 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 CRCPO75575 148 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 LRATO95237 230 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 IL3P08700 152 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 IFI6P09912 130 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 MYL2P10916 166 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 PYGBP11216 843 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 CYP4B1P13584 511 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 CPN1P15169 458 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 DDCP20711 480 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 CHMP24386 653 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 OPRM1P35372 400 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 KIR2DL3P43628 341 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 PNLIPRP2P54317 469 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 ZNF763Q0D2J5 394 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 EXOSC7Q15024 291 aaKnown RBP13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 IMPG1Q17R60 797 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 TRMT12Q53H54 448 aaKnown RBP13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 AAGABQ6PD74 315 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 ZYG11AQ6WRX3 759 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 CCDC116Q8IYX3 515 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 PRR22Q8IZ63 422 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 ADCY4Q8NFM4 1077 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 C16orf78Q8WTQ4 265 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 FAM222BQ8WU58 562 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 NINJ1Q92982 152 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 HBEGFQ99075 208 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 UGT2B28Q9BY64 529 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 TXLNGYQ9BZA5 131 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 OR2B2Q9GZK3 357 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 MID1IP1Q9NPA3 183 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 MIEF1Q9NQG6 463 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 RRAGDQ9NQL2 400 aaPredicted RBP13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 TAS2R7Q9NYW3 318 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 MRTO4Q9UKD2 239 aaKnown RBP13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 CAMK2AQ9UQM7 478 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 ARHGAP21Q5T5U3 1957 aa13.17□□□□□ -0.3
HMGCS1-203ENST00000507004 A0A087WV62 115 aa13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 MBD3L4A6NDZ8 208 aaPredicted RBP13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 MBD3L3A6NE82 208 aaPredicted RBP13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 MBD3L5A6NJ08 208 aaPredicted RBP13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 UGT2B11O75310 529 aa13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 ERN1O75460 977 aaKnown RBP13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 REM1O75628 298 aa13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 ANXA4P09525 319 aaPredicted RBP13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 PCSK2P16519 638 aa13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 BMP7P18075 431 aa13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 CTSSP25774 331 aa13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 IL12BP29460 328 aa13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 SRD5A2P31213 254 aa13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 DNAJB13P59910 316 aa13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 CFAP157Q5JU67 520 aa13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 SPDYAQ5MJ70 313 aa13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 BICRALQ6AI39 1079 aa13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 IKBIPQ70UQ0 350 aa13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 TDRPQ86YL5 185 aa13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 PLCZ1Q86YW0 608 aa13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 LIX1LQ8IVB5 337 aa13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 FAM83FQ8NEG4 500 aaPredicted RBP13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 MBD3L2Q8NHZ7 208 aaPredicted RBP13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 EXOSC8Q96B26 276 aaKnown RBP13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 TRIM44Q96DX7 344 aaPredicted RBP13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 C11orf24Q96F05 449 aaPredicted RBP13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 APIPQ96GX9 242 aa13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 WDYHV1Q96HA8 205 aa13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 VSTM2LQ96N03 204 aa13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 BBS4Q96RK4 519 aa13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 NODALQ96S42 347 aa13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 TM9SF2Q99805 663 aa13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 SDHAF3Q9NRP4 125 aa13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 HEY2Q9UBP5 337 aa13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 DTX4Q9Y2E6 619 aa13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 LRBAP50851 2863 aa13.16□□□□□ -0.3
HMGCS1-203ENST00000507004 F8P00451 2351 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 FREM3P0C091 2139 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 EXPH5Q8NEV8 1989 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 GOLGA8RI6L899 631 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms