RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 RP9Q8TA86 221 aaKnown RBP7.83□□□□□ -1.16
PDGFC-205ENST00000506880 PAQR8Q8TEZ7 354 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 RNF138Q8WVD3 245 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 C10orf82Q8WW14 230 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 POP5Q969H6 163 aaKnown RBP7.83□□□□□ -1.16
PDGFC-205ENST00000506880 TMCO6Q96DC7 493 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 CMTM5Q96DZ9 223 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 SPDL1Q96EA4 605 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 SCMH1Q96GD3 660 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 C5orf34Q96MH7 638 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 RASL10BQ96S79 203 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 TMEM120AQ9BXJ8 343 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 PIGUQ9H490 435 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 CDCP1Q9H5V8 836 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 EXD2Q9NVH0 621 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 NDE1Q9NXR1 346 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 BCAP29Q9UHQ4 241 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 LEF1Q9UJU2 399 aaPredicted RBP7.83□□□□□ -1.16
PDGFC-205ENST00000506880 ZNF223Q9UK11 482 aaPredicted RBP7.83□□□□□ -1.16
PDGFC-205ENST00000506880 ARL2BPQ9Y2Y0 163 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 MRPS18CQ9Y3D5 142 aaKnown RBP7.83□□□□□ -1.16
PDGFC-205ENST00000506880 NPFFR2Q9Y5X5 522 aa7.83□□□□□ -1.16
PDGFC-205ENST00000506880 COPG1Q9Y678 874 aaKnown RBP7.83□□□□□ -1.16
PDGFC-205ENST00000506880 BOD1L1Q8NFC6 3051 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 NINQ8N4C6 2090 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 DNAJC13O75165 2243 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 SVILO95425 2214 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 A0A096LPI6 279 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 A0A1W2PQD3 144 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 ASPDHA6ND91 283 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 TMEM247A6NEH6 219 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 CCDC154A6NI56 674 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 TMEM200CA6NKL6 621 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 AKAP10O43572 662 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 DNAJA2O60884 412 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 PPM1BO75688 479 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 CLPSP04118 112 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 SNRPB2P08579 225 aaKnown RBP7.82□□□□□ -1.16
PDGFC-205ENST00000506880 ALOX5P09917 674 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 CT45A8P0DMV1 189 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 CT45A9P0DMV2 189 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 BMP2P12643 396 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 ABCD3P28288 659 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 PIGAP37287 484 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 CLK3P49761 638 aaKnown RBP7.82□□□□□ -1.16
PDGFC-205ENST00000506880 UFM1P61960 85 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 GNGT1P63211 74 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 HBA1P69905 142 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 PSG6Q00889 435 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 TUBA3CQ13748 450 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 PGS1Q32NB8 556 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 KRTCAP3Q53RY4 240 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 ZNF385BQ569K4 471 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 CT45A2Q5DJT8 189 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 SPANXN4Q5MJ08 99 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 ATAD3BQ5T9A4 648 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 GKAP1Q5VSY0 366 aaPredicted RBP7.82□□□□□ -1.16
PDGFC-205ENST00000506880 SLC22A10Q63ZE4 541 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 SAXO2Q658L1 398 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 MFSD12Q6NUT3 480 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 TUBA3EQ6PEY2 450 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 PIGWQ7Z7B1 504 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 CYP4Z2PQ8N1L4 340 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 FBXW8Q8N3Y1 598 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 KRTCAP2Q8N6L1 136 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 ZNF527Q8NB42 609 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 CHDHQ8NE62 594 aaPredicted RBP7.82□□□□□ -1.16
PDGFC-205ENST00000506880 BHLHE22Q8NFJ8 381 aaPredicted RBP7.82□□□□□ -1.16
PDGFC-205ENST00000506880 TOR1AIP2Q8NFQ8 470 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 OR7G2Q8NG99 324 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 OR52R1Q8NGF1 315 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 DIO2Q92813 273 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 SLC35B4Q969S0 331 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 MARVELD3Q96A59 401 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 ROPN1LQ96C74 230 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 NTNG2Q96CW9 530 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 FAM120BQ96EK7 910 aaKnown RBP7.82□□□□□ -1.16
PDGFC-205ENST00000506880 FRMD6Q96NE9 622 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 PANX1Q96RD7 426 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 BARD1Q99728 777 aaKnown RBP7.82□□□□□ -1.16
PDGFC-205ENST00000506880 EBF4Q9BQW3 602 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 BTBD2Q9BX70 525 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 NMUR2Q9GZQ4 415 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 FOLH1BQ9HBA9 442 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 SH2D2AQ9NP31 389 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 SLAMF7Q9NQ25 335 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 SDHAF3Q9NRP4 125 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 AGPAT4Q9NRZ5 378 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 SIRT3Q9NTG7 399 aaPredicted RBP7.82□□□□□ -1.16
PDGFC-205ENST00000506880 SACM1LQ9NTJ5 587 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 ZCCHC3Q9NUD5 404 aaKnown RBP7.82□□□□□ -1.16
PDGFC-205ENST00000506880 GID8Q9NWU2 228 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 LRFN1Q9P244 771 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 DCTN4Q9UJW0 460 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 ADAM21Q9UKJ8 722 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 TP53TG5Q9Y2B4 290 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 CAPN7Q9Y6W3 813 aa7.82□□□□□ -1.16
PDGFC-205ENST00000506880 GTF3C1Q12789 2109 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 IGHV3-20A0A0C4DH32 117 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms