RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 ASB14A6NK59 587 aa4.9□□□□□ -1.63
HERC4-213ENST00000506515 NEDD8-MDP1E9PL57 170 aa4.9□□□□□ -1.63
HERC4-213ENST00000506515 SOCS3O14543 225 aa4.9□□□□□ -1.63
HERC4-213ENST00000506515 TRAFD1O14545 582 aaPredicted RBP4.9□□□□□ -1.63
HERC4-213ENST00000506515 DCXO43602 365 aa4.9□□□□□ -1.63
HERC4-213ENST00000506515 ANXA9O76027 345 aa4.9□□□□□ -1.63
HERC4-213ENST00000506515 SLC4A1P02730 911 aa4.9□□□□□ -1.63
HERC4-213ENST00000506515 IGKV5-2P06315 115 aa4.9□□□□□ -1.63
HERC4-213ENST00000506515 ZNF10P21506 573 aaPredicted RBP4.9□□□□□ -1.63
HERC4-213ENST00000506515 AHCYP23526 432 aa4.9□□□□□ -1.63
HERC4-213ENST00000506515 OXTRP30559 389 aa4.9□□□□□ -1.63
HERC4-213ENST00000506515 CRYBA2P53672 197 aa4.9□□□□□ -1.63
HERC4-213ENST00000506515 RPS27AP62979 156 aaKnown RBP4.9□□□□□ -1.63
HERC4-213ENST00000506515 IRX3P78415 501 aaPredicted RBP4.9□□□□□ -1.63
HERC4-213ENST00000506515 HSPA14Q0VDF9 509 aa4.9□□□□□ -1.63
HERC4-213ENST00000506515 ZNF146Q15072 292 aa4.9□□□□□ -1.63
HERC4-213ENST00000506515 MPPE1Q53F39 396 aa4.9□□□□□ -1.63
HERC4-213ENST00000506515 RTL6Q6ICC9 239 aa4.9□□□□□ -1.63
HERC4-213ENST00000506515 APOBEC3HQ6NTF7 200 aaKnown RBP4.9□□□□□ -1.63
HERC4-213ENST00000506515 DOK6Q6PKX4 331 aa4.9□□□□□ -1.63
HERC4-213ENST00000506515 DLEU7Q6UYE1 221 aa4.9□□□□□ -1.63
HERC4-213ENST00000506515 ADAMTSL2Q86TH1 951 aa4.9□□□□□ -1.63
HERC4-213ENST00000506515 PARP8Q8N3A8 854 aa4.9□□□□□ -1.63
HERC4-213ENST00000506515 OR52E1Q8NGJ3 308 aa4.9□□□□□ -1.63
HERC4-213ENST00000506515 OR6F1Q8NGZ6 308 aa4.9□□□□□ -1.63
HERC4-213ENST00000506515 SPPL2AQ8TCT8 520 aa4.9□□□□□ -1.63
HERC4-213ENST00000506515 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.9□□□□□ -1.63
HERC4-213ENST00000506515 TCP11Q8WWU5 503 aa4.9□□□□□ -1.63
HERC4-213ENST00000506515 RPGRIP1Q96KN7 1286 aa4.9□□□□□ -1.63
HERC4-213ENST00000506515 RAB40CQ96S21 281 aa4.9□□□□□ -1.63
HERC4-213ENST00000506515 TRPV6Q9H1D0 765 aa4.9□□□□□ -1.63
HERC4-213ENST00000506515 COPS7AQ9UBW8 275 aa4.9□□□□□ -1.63
HERC4-213ENST00000506515 FAM153AQ9UHL3 310 aa4.9□□□□□ -1.63
HERC4-213ENST00000506515 MUTYHQ9UIF7 546 aa4.9□□□□□ -1.63
HERC4-213ENST00000506515 RPH3AQ9Y2J0 694 aaPredicted RBP4.9□□□□□ -1.63
HERC4-213ENST00000506515 PIEZO1Q92508 2521 aa4.9□□□□□ -1.63
HERC4-213ENST00000506515 MUC3AQ02505 3323 aa4.89□□□□□ -1.63
HERC4-213ENST00000506515 YJEFN3A6XGL0 299 aa4.89□□□□□ -1.63
HERC4-213ENST00000506515 SNAP91O60641 907 aa4.89□□□□□ -1.63
HERC4-213ENST00000506515 SORBS2O94875 1100 aaKnown RBP4.89□□□□□ -1.63
HERC4-213ENST00000506515 ASNSP08243 561 aa4.89□□□□□ -1.63
HERC4-213ENST00000506515 ZNF853P0CG23 659 aa4.89□□□□□ -1.63
HERC4-213ENST00000506515 ZNF883P0CG24 379 aa4.89□□□□□ -1.63
HERC4-213ENST00000506515 MARCKSP29966 332 aaPredicted RBP4.89□□□□□ -1.63
HERC4-213ENST00000506515 LIMK2P53671 638 aa4.89□□□□□ -1.63
HERC4-213ENST00000506515 RPL27P61353 136 aaKnown RBP4.89□□□□□ -1.63
HERC4-213ENST00000506515 FKBP3Q00688 224 aaKnown RBP4.89□□□□□ -1.63
HERC4-213ENST00000506515 PDK1Q15118 436 aa4.89□□□□□ -1.63
HERC4-213ENST00000506515 P2RY14Q15391 338 aa4.89□□□□□ -1.63
HERC4-213ENST00000506515 GPAT3Q53EU6 434 aa4.89□□□□□ -1.63
HERC4-213ENST00000506515 NKAIN2Q5VXU1 208 aa4.89□□□□□ -1.63
HERC4-213ENST00000506515 TATDN1Q6P1N9 297 aa4.89□□□□□ -1.63
HERC4-213ENST00000506515 Q6ZRG5 221 aa4.89□□□□□ -1.63
HERC4-213ENST00000506515 FAM131BQ86XD5 332 aa4.89□□□□□ -1.63
HERC4-213ENST00000506515 RELL2Q8NC24 303 aaPredicted RBP4.89□□□□□ -1.63
HERC4-213ENST00000506515 PRSS33Q8NF86 280 aa4.89□□□□□ -1.63
HERC4-213ENST00000506515 PCNPQ8WW12 178 aaKnown RBP4.89□□□□□ -1.63
HERC4-213ENST00000506515 SLC13A3Q8WWT9 602 aa4.89□□□□□ -1.63
HERC4-213ENST00000506515 ESAMQ96AP7 390 aa4.89□□□□□ -1.63
HERC4-213ENST00000506515 SLC45A3Q96JT2 553 aa4.89□□□□□ -1.63
HERC4-213ENST00000506515 GPR137Q96N19 417 aa4.89□□□□□ -1.63
HERC4-213ENST00000506515 SPXQ9BT56 116 aa4.89□□□□□ -1.63
HERC4-213ENST00000506515 LRRC61Q9BV99 259 aa4.89□□□□□ -1.63
HERC4-213ENST00000506515 XPO4Q9C0E2 1151 aaKnown RBP4.89□□□□□ -1.63
HERC4-213ENST00000506515 TNMDQ9H2S6 317 aa4.89□□□□□ -1.63
HERC4-213ENST00000506515 NMUR1Q9HB89 426 aa4.89□□□□□ -1.63
HERC4-213ENST00000506515 TRIM10Q9UDY6 481 aa4.89□□□□□ -1.63
HERC4-213ENST00000506515 DIMT1Q9UNQ2 313 aaKnown RBP4.89□□□□□ -1.63
HERC4-213ENST00000506515 MRPS2Q9Y399 296 aaKnown RBP4.89□□□□□ -1.63
HERC4-213ENST00000506515 RNF215Q9Y6U7 377 aa4.89□□□□□ -1.63
HERC4-213ENST00000506515 SSC5DA1L4H1 1573 aa4.89□□□□□ -1.63
HERC4-213ENST00000506515 IGKV3D-15A0A087WSY6 115 aa4.88□□□□□ -1.63
HERC4-213ENST00000506515 A0A0J9YWU9 116 aa4.88□□□□□ -1.63
HERC4-213ENST00000506515 LOC390937A0A1W2PQ73 354 aa4.88□□□□□ -1.63
HERC4-213ENST00000506515 FBP2O00757 339 aa4.88□□□□□ -1.63
HERC4-213ENST00000506515 CSDE1O75534 798 aaKnown RBP4.88□□□□□ -1.63
HERC4-213ENST00000506515 REC8O95072 547 aa4.88□□□□□ -1.63
HERC4-213ENST00000506515 POP4O95707 220 aaKnown RBP4.88□□□□□ -1.63
HERC4-213ENST00000506515 FHP07954 510 aa4.88□□□□□ -1.63
HERC4-213ENST00000506515 CYP2B6P20813 491 aa4.88□□□□□ -1.63
HERC4-213ENST00000506515 MTIF2P46199 727 aaKnown RBP4.88□□□□□ -1.63
HERC4-213ENST00000506515 GYG1P46976 350 aa4.88□□□□□ -1.63
HERC4-213ENST00000506515 ZFP36L2P47974 494 aaKnown RBP4.88□□□□□ -1.63
HERC4-213ENST00000506515 NDUFV3P56181 108 aaKnown RBP4.88□□□□□ -1.63
HERC4-213ENST00000506515 GSTO1P78417 241 aa4.88□□□□□ -1.63
HERC4-213ENST00000506515 CCZ1BP86790 482 aa4.88□□□□□ -1.63
HERC4-213ENST00000506515 CCZ1P86791 482 aaPredicted RBP4.88□□□□□ -1.63
HERC4-213ENST00000506515 TCP10Q12799 353 aa4.88□□□□□ -1.63
HERC4-213ENST00000506515 SPP2Q13103 211 aa4.88□□□□□ -1.63
HERC4-213ENST00000506515 LY6DQ14210 128 aa4.88□□□□□ -1.63
HERC4-213ENST00000506515 SHHQ15465 462 aa4.88□□□□□ -1.63
HERC4-213ENST00000506515 CARTPTQ16568 116 aa4.88□□□□□ -1.63
HERC4-213ENST00000506515 CMPK2Q5EBM0 449 aa4.88□□□□□ -1.63
HERC4-213ENST00000506515 TMEM31Q5JXX7 168 aa4.88□□□□□ -1.63
HERC4-213ENST00000506515 KRTAP7-1Q8IUC3 87 aa4.88□□□□□ -1.63
HERC4-213ENST00000506515 LEMD2Q8NC56 503 aa4.88□□□□□ -1.63
HERC4-213ENST00000506515 GOLGA5Q8TBA6 731 aa4.88□□□□□ -1.63
HERC4-213ENST00000506515 KIAA1524Q8TCG1 905 aa4.88□□□□□ -1.63
HERC4-213ENST00000506515 MIPOL1Q8TD10 442 aa4.88□□□□□ -1.63
HERC4-213ENST00000506515 LRRC15Q8TF66 581 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms