RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 MBL2P11226 248 aaPredicted RBP2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 KRT13P13646 458 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 MYOGP15173 224 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 CEBPBP17676 345 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 TNNI3P19429 210 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 CYP2F1P24903 491 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 PRDX2P32119 198 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 GPR183P32249 361 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 ABCE1P61221 599 aaKnown RBP2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 ELP6Q0PNE2 266 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 CLPPQ16740 277 aaPredicted RBP2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 SGSM1Q2NKQ1 1148 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 LIPKQ5VXJ0 399 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 FAM53AQ6NSI3 398 aaPredicted RBP2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 SLC25A24Q6NUK1 477 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 FIP1L1Q6UN15 594 aaKnown RBP2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 ZNF730Q6ZMV8 503 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 MEX3BQ6ZN04 569 aaKnown RBP2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 ASRGL1Q7L266 308 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 ZER1Q7Z7L7 766 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 VPS36Q86VN1 386 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 LCA5Q86VQ0 697 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 SLC22A16Q86VW1 577 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 ZNF573Q86YE8 665 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 APLFQ8IW19 511 aaPredicted RBP2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 DCLK2Q8N568 766 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 MLKLQ8NB16 471 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 ADAD2Q8NCV1 583 aaKnown RBP2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 MRGPRDQ8TDS7 321 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 THRSPQ92748 146 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 P3H4Q92791 437 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 DTNBP1Q96EV8 351 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 ZNF486Q96H40 463 aaPredicted RBP2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 PRAC1Q96KF2 57 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 INPP4AQ96PE3 977 aaPredicted RBP2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 DEFB118Q96PH6 123 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 RAB40CQ96S21 281 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 JPH2Q9BR39 696 aaPredicted RBP2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 DCTN5Q9BTE1 182 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 TPPP3Q9BW30 176 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 PINK1Q9BXM7 581 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 DEFB129Q9H1M3 183 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 FAM124BQ9H5Z6 455 aaPredicted RBP2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 ACTR8Q9H981 624 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 YAE1D1Q9NRH1 226 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 CENPMQ9NSP4 180 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 C2orf42Q9NWW7 574 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 TEX10Q9NXF1 929 aaPredicted RBP2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 KLK11Q9UBX7 282 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 LNPEPQ9UIQ6 1025 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 LAMP5Q9UJQ1 280 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 PPP1R3CQ9UQK1 317 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 TCF19Q9Y242 345 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 ATG4BQ9Y4P1 393 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 WIPI2Q9Y4P8 454 aa2.78□□□□□ -1.96
TRAPPC11-205ENST00000506426 CASP8AP2Q9UKL3 1982 aa2.78□□□□□ -1.97
TRAPPC11-205ENST00000506426 ANHXE9PGG2 379 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 INPP4BO15327 924 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 CHADO15335 359 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 ADAM12O43184 909 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 MAGEC1O60732 1142 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 CSO75390 466 aaKnown RBP2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 CSDE1O75534 798 aaKnown RBP2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 ANXA9O76027 345 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 IGHDP01880 384 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 CALCBP10092 127 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 ANOS1P23352 680 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 DPP4P27487 766 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 RPL9P32969 192 aaKnown RBP2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 NF2P35240 595 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 MATKP42679 507 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 GYG1P46976 350 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 IFNAR2P48551 515 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 NPY2RP49146 381 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 KRTAP10-7P60409 375 aaPredicted RBP2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 SNRPD1P62314 119 aaKnown RBP2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 TRA2BP62995 288 aaKnown RBP2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 PMP22Q01453 160 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 RBBP4Q09028 425 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 OVGP1Q12889 678 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 RIGQ13278 110 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 GCKRQ14397 625 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 P2RY14Q15391 338 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 SHROOM1Q2M3G4 852 aaPredicted RBP2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 ZNF528Q3MIS6 628 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 FAM76BQ5HYJ3 339 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 KIAA1161Q6NSJ0 714 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 Q6ZRG5 221 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 GOLGA7Q7Z5G4 137 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 APOBEC3FQ8IUX4 373 aaKnown RBP2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 WDR49Q8IV35 697 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 DCUN1D3Q8IWE4 304 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 TBC1D21Q8IYX1 336 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 LINC00518Q8N0U6 118 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 GVQW1Q8N7I0 195 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 DDHD1Q8NEL9 900 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 IPMKQ8NFU5 416 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 OR9Q2Q8NGE9 314 aa2.77□□□□□ -1.97
TRAPPC11-205ENST00000506426 RDH11Q8TC12 318 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms