RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 TRAV26-1A0A087WT03 109 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 A0A0J9YYE9 177 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 A0A1B0GVT2 93 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 A0A1W2PPK0 400 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 INAFM1C9JVW0 142 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 NPIPA3F8WFD2 350 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 GOLGA8TH3BQL2 631 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 M0R296 226 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 PDHXO00330 501 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 POLR1CO15160 346 aaPredicted RBP3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 NIPSNAP2O75323 286 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 SAP30O75446 220 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 LDLRP01130 860 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 TRBC1P01850 177 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 UNGP13051 313 aaPredicted RBP3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 AMD1P17707 334 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 CHRNB2P17787 502 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 PTNP21246 168 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 SSTR1P30872 391 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ATP5C1P36542 298 aaKnown RBP3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 NOVP48745 357 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 TNFSF10P50591 281 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 RASSF2P50749 326 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 CLCN4P51793 760 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 THOP1P52888 689 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 BACE1P56817 501 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 YWHAGP61981 247 aaKnown RBP eCLIP3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 RPS15P62841 145 aaKnown RBP3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 CSNK2BP67870 215 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 OTUD4Q01804 1114 aaKnown RBP3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 FOXM1Q08050 763 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 FAM27E3Q08E93 113 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 HYAL1Q12794 435 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 MERTKQ12866 999 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 GPS2Q13227 327 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 BTG3Q14201 252 aaPredicted RBP3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 HNRNPA1L2Q32P51 320 aaKnown RBP3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 DCAF4L1Q3SXM0 396 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 HIKESHIQ53FT3 197 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 AGKQ53H12 422 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 FAM76BQ5HYJ3 339 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 HIST2H2AA3Q6FI13 130 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 LCN10Q6JVE6 187 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ANKRD54Q6NXT1 300 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 TMEM71Q6P5X7 295 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ZNF704Q6ZNC4 412 aaPredicted RBP3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 TMEM179Q6ZVK1 233 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 KCTD8Q6ZWB6 473 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 CENPUQ71F23 418 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ARHGAP22Q7Z5H3 698 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 GPR141Q7Z602 305 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 YRDCQ86U90 279 aaKnown RBP3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 EFCAB13Q8IY85 973 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ZNF444Q8N0Y2 327 aaPredicted RBP3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 OR5D13Q8NGL4 314 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 KCNG3Q8TAE7 436 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 RAET1EQ8TD07 263 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 TRIB2Q92519 343 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 NEUROG1Q92886 237 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 MCHR2Q969V1 340 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 C12orf42Q96LP6 360 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 PRRC1Q96M27 445 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 SPATA16Q9BXB7 569 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 LRRC2Q9BYS8 371 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 WWP1Q9H0M0 922 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ESRP2Q9H6T0 727 aaKnown RBP3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 TMEM185BQ9H7F4 350 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 MARCH7Q9H992 704 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 TREM1Q9NP99 234 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 MMP25Q9NPA2 562 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 MRPL22Q9NWU5 206 aaKnown RBP3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 OSER1Q9NX31 292 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 GCNT4Q9P109 453 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 RCC2Q9P258 522 aaKnown RBP3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 KLHL9Q9P2J3 617 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 PLEKHB1Q9UF11 243 aaPredicted RBP3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 MTRF1LQ9UGC7 380 aaKnown RBP3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 CD300AQ9UGN4 299 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 CDH9Q9ULB4 789 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ZNF490Q9ULM2 529 aaPredicted RBP3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 PACSIN2Q9UNF0 486 aaPredicted RBP3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 B9D1Q9UPM9 204 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ERVK-19Q9WJR5 959 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 CA5BQ9Y2D0 317 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 RAP2CQ9Y3L5 183 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 PTGDR2Q9Y5Y4 395 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 BZW2Q9Y6E2 419 aaKnown RBP3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 NEDD4P46934 1319 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ZSWIM8A7E2V4 1837 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 PLIN4Q96Q06 1357 aa3.88□□□□□ -1.79
PDLIM1P4-201ENST00000504327 PARP14Q460N5 1801 aa3.87□□□□□ -1.79
PDLIM1P4-201ENST00000504327 PRSS51A0A1B0GVH4 220 aa3.87□□□□□ -1.79
PDLIM1P4-201ENST00000504327 TUBAL3A6NHL2 446 aa3.87□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ASB14A6NK59 587 aa3.87□□□□□ -1.79
PDLIM1P4-201ENST00000504327 OR6C75A6NL08 312 aa3.87□□□□□ -1.79
PDLIM1P4-201ENST00000504327 TMCO5BA8MYB1 307 aa3.87□□□□□ -1.79
PDLIM1P4-201ENST00000504327 RSPH10B2B2RC85 870 aa3.87□□□□□ -1.79
PDLIM1P4-201ENST00000504327 I6L893 689 aaPredicted RBP3.87□□□□□ -1.79
PDLIM1P4-201ENST00000504327 SPINT2O43291 252 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms