RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 MAL2Q969L2 176 aa8.46□□□□□ -1.06
NR1I3-216ENST00000502848 EME1Q96AY2 570 aa8.46□□□□□ -1.06
NR1I3-216ENST00000502848 NACC2Q96BF6 587 aa8.46□□□□□ -1.06
NR1I3-216ENST00000502848 TAMM41Q96BW9 452 aa8.46□□□□□ -1.06
NR1I3-216ENST00000502848 CLIP3Q96DZ5 547 aa8.46□□□□□ -1.06
NR1I3-216ENST00000502848 HSH2DQ96JZ2 352 aa8.46□□□□□ -1.06
NR1I3-216ENST00000502848 C7orf34Q96L11 122 aa8.46□□□□□ -1.06
NR1I3-216ENST00000502848 VSTM2LQ96N03 204 aa8.46□□□□□ -1.06
NR1I3-216ENST00000502848 PTCHD1Q96NR3 888 aa8.46□□□□□ -1.06
NR1I3-216ENST00000502848 SEPHS2Q99611 448 aa8.46□□□□□ -1.06
NR1I3-216ENST00000502848 CTRCQ99895 268 aa8.46□□□□□ -1.06
NR1I3-216ENST00000502848 G6PC3Q9BUM1 346 aa8.46□□□□□ -1.06
NR1I3-216ENST00000502848 POLR2J2Q9GZM3 115 aaKnown RBP8.46□□□□□ -1.06
NR1I3-216ENST00000502848 ZNF350Q9GZX5 532 aa8.46□□□□□ -1.06
NR1I3-216ENST00000502848 POLR2J3Q9H1A7 115 aaKnown RBP8.46□□□□□ -1.06
NR1I3-216ENST00000502848 SLC38A1Q9H2H9 487 aa8.46□□□□□ -1.06
NR1I3-216ENST00000502848 MTHFD2LQ9H903 347 aaPredicted RBP8.46□□□□□ -1.06
NR1I3-216ENST00000502848 IFT80Q9P2H3 777 aaPredicted RBP8.46□□□□□ -1.06
NR1I3-216ENST00000502848 SEC14L3Q9UDX4 400 aa8.46□□□□□ -1.06
NR1I3-216ENST00000502848 C19orf25Q9UFG5 118 aaPredicted RBP8.46□□□□□ -1.06
NR1I3-216ENST00000502848 C15orf41Q9Y2V0 281 aa8.46□□□□□ -1.06
NR1I3-216ENST00000502848 DTNAQ9Y4J8 743 aa8.46□□□□□ -1.06
NR1I3-216ENST00000502848 HEMK1Q9Y5R4 338 aaPredicted RBP8.46□□□□□ -1.06
NR1I3-216ENST00000502848 NUP210LQ5VU65 1888 aa8.46□□□□□ -1.06
NR1I3-216ENST00000502848 ADAMTS9Q9P2N4 1935 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 CCDC187A0A096LP49 1063 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 A0A1W2PQ72 361 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 ARRDC5A6NEK1 342 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 TMEM229AB2RXF0 380 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 C9J4A7 227 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 M0QX08 132 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 MEN1O00255 615 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 KIAA0513O60268 411 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 STX11O75558 287 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 DNAJB5O75953 348 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 CST1P01037 141 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 C1QCP02747 245 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 IGKV3-11P04433 115 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 ZGLP1P0C6A0 271 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 ACP2P11117 423 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 ZNF26P17031 533 aaPredicted RBP8.45□□□□□ -1.06
NR1I3-216ENST00000502848 CD247P20963 164 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 MAOAP21397 527 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 RPS4Y1P22090 263 aaKnown RBP8.45□□□□□ -1.06
NR1I3-216ENST00000502848 TGM1P22735 817 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 PEX2P28328 305 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 TRHRP34981 398 aaPredicted RBP8.45□□□□□ -1.06
NR1I3-216ENST00000502848 OR1D4P47884 311 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 EMDP50402 254 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 ERFP50548 548 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 SMIM11AP58511 58 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 RPS26P62854 115 aaKnown RBP8.45□□□□□ -1.06
NR1I3-216ENST00000502848 KCNJ10P78508 379 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 MRPS35P82673 323 aaKnown RBP8.45□□□□□ -1.06
NR1I3-216ENST00000502848 INSM1Q01101 510 aaPredicted RBP8.45□□□□□ -1.06
NR1I3-216ENST00000502848 FUT5Q11128 374 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 EPS8Q12929 822 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 DUSP8Q13202 625 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 NKG7Q16617 165 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 SYT16Q17RD7 645 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.45□□□□□ -1.06
NR1I3-216ENST00000502848 ISXQ2M1V0 245 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 RFX4Q33E94 735 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 DCAF12Q5T6F0 453 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 RNF220Q5VTB9 566 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 OR2T5Q6IEZ7 315 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 MRPL14Q6P1L8 145 aaKnown RBP8.45□□□□□ -1.06
NR1I3-216ENST00000502848 B3GNT8Q7Z7M8 397 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 HIPK1Q86Z02 1210 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 ZDHHC13Q8IUH4 622 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 KBTBD2Q8IY47 623 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 FAM86B1Q8N7N1 296 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 ZNF615Q8N8J6 731 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 COX18Q8N8Q8 333 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 SLC16A11Q8NCK7 471 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 ICA1LQ8NDH6 482 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 OR2T29Q8NH02 315 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 OR8K3Q8NH51 312 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 STT3BQ8TCJ2 826 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 SPPL2AQ8TCT8 520 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 PTPMT1Q8WUK0 201 aaPredicted RBP8.45□□□□□ -1.06
NR1I3-216ENST00000502848 APOBEC4Q8WW27 367 aaKnown RBP8.45□□□□□ -1.06
NR1I3-216ENST00000502848 DNAJC9Q8WXX5 260 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 SDCCAG3Q96C92 435 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 ZNF354BQ96LW1 612 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 EPYCQ99645 322 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 PSD2Q9BQI7 771 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 PINK1Q9BXM7 581 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 VN1R1Q9GZP7 353 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 GABARAPL1Q9H0R8 117 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 Q9H521 79 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 ARMC7Q9H6L4 198 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 Q9N2J8 555 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 NECTIN3Q9NQS3 549 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 SLC22A11Q9NSA0 550 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 OCIAD1Q9NX40 245 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 KLHL28Q9NXS3 571 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 MRTO4Q9UKD2 239 aaKnown RBP8.45□□□□□ -1.06
NR1I3-216ENST00000502848 SLC9A8Q9Y2E8 581 aa8.45□□□□□ -1.06
NR1I3-216ENST00000502848 PCDHGA10Q9Y5H3 936 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms