RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 GUSBP08236 651 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 KRT16P08779 473 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 EDN3P14138 238 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 ABCD3P28288 659 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 MC3RP41968 323 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 PNLIPRP2P54317 469 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 WNT3P56703 355 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 MRPS22P82650 360 aaKnown RBP9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 PSG6Q00889 435 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 SLC9B1Q4ZJI4 515 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 KRTCAP3Q53RY4 240 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 SLC22A10Q63ZE4 541 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 FAM180AQ6UWF9 173 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 NUP54Q7Z3B4 507 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 SLC34A3Q8N130 599 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 AMER2Q8N7J2 671 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 CDRT4Q8N9R6 151 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 ST6GALNAC3Q8NDV1 305 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 ADCY4Q8NFM4 1077 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 OR7A2PQ8NGA2 310 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 OR56A1Q8NGH5 318 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 CLHC1Q8NHS4 586 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 THAP3Q8WTV1 239 aaPredicted RBP9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 OIT3Q8WWZ8 545 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 NR4A3Q92570 626 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 GFM2Q969S9 779 aaKnown RBP9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 GIMAP5Q96F15 307 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 FRMD6Q96NE9 622 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 MS4A4EQ96PG1 132 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 STACQ99469 402 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 ITPAQ9BY32 194 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 NXF5Q9H1B4 397 aaKnown RBP9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 WDR55Q9H6Y2 383 aaPredicted RBP9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 FOLH1BQ9HBA9 442 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 TCF7L2Q9NQB0 619 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 DUSP22Q9NRW4 184 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 SIRT3Q9NTG7 399 aaPredicted RBP9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 SACM1LQ9NTJ5 587 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 QPCTLQ9NXS2 382 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 BCAP29Q9UHQ4 241 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 BTNL2Q9UIR0 455 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 MRTO4Q9UKD2 239 aaKnown RBP9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 DTX4Q9Y2E6 619 aa9.89□□□□□ -0.83
UBE2D3-212ENST00000502563 SHANK1Q9Y566 2161 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 J3QKU1 62 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 UBDO15205 165 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 POLR3GO15318 223 aaPredicted RBP9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 EMC8O43402 210 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 AKAP10O43572 662 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 NKX2-2O95096 273 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 SNX4O95219 450 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 PGRP06401 933 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 KITP10721 976 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 PLA2G2AP14555 144 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 CNR1P21554 472 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 GPC1P35052 558 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 IDH3AP50213 366 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 NR0B1P51843 470 aaKnown RBP9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 TDGF1P3P51864 188 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 PSMD4P55036 377 aaKnown RBP9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 HSPB3Q12988 150 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 EFR3AQ14156 821 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 EXOSC7Q15024 291 aaKnown RBP9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 ZNHIT3Q15649 155 aaPredicted RBP9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 MAPKAPK3Q16644 382 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 FAM180BQ6P0A1 224 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 TMEM107Q6UX40 140 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 GK5Q6ZS86 529 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 ZNF551Q7Z340 670 aaPredicted RBP9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 PRICKLE2Q7Z3G6 844 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 GALNTL5Q7Z4T8 443 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 MDGA2Q7Z553 956 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 KRTCAP2Q8N6L1 136 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 MIPOL1Q8TD10 442 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 KAT2AQ92830 837 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 CIDECQ96AQ7 238 aaPredicted RBP9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 FAM120BQ96EK7 910 aaKnown RBP9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 CCDC115Q96NT0 180 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 TAAR6Q96RI8 345 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 GAL3ST4Q96RP7 486 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 FAM173AQ9BQD7 235 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 Q9N2J8 555 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 ERVK-11Q9UQG0 969 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 GMEB1Q9Y692 573 aa9.88□□□□□ -0.83
UBE2D3-212ENST00000502563 POLEQ07864 2286 aa9.87□□□□□ -0.83
UBE2D3-212ENST00000502563 TSPAN2O60636 221 aa9.87□□□□□ -0.83
UBE2D3-212ENST00000502563 DIAPH2O60879 1101 aa9.87□□□□□ -0.83
UBE2D3-212ENST00000502563 SLC22A3O75751 556 aa9.87□□□□□ -0.83
UBE2D3-212ENST00000502563 GLSO94925 669 aaPredicted RBP9.87□□□□□ -0.83
UBE2D3-212ENST00000502563 P04436 131 aa9.87□□□□□ -0.83
UBE2D3-212ENST00000502563 NGFRP08138 427 aa9.87□□□□□ -0.83
UBE2D3-212ENST00000502563 ABCB1P08183 1280 aaPredicted RBP9.87□□□□□ -0.83
UBE2D3-212ENST00000502563 MDH1P40925 334 aaKnown RBP9.87□□□□□ -0.83
UBE2D3-212ENST00000502563 PRIM2P49643 509 aa9.87□□□□□ -0.83
UBE2D3-212ENST00000502563 HBA1P69905 142 aa9.87□□□□□ -0.83
UBE2D3-212ENST00000502563 RCAN2Q14206 197 aa9.87□□□□□ -0.83
UBE2D3-212ENST00000502563 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.87□□□□□ -0.83
UBE2D3-212ENST00000502563 MFSD12Q6NUT3 480 aa9.87□□□□□ -0.83
UBE2D3-212ENST00000502563 IL20RBQ6UXL0 311 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms