RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 SRSF11Q05519 484 aaKnown RBP8.43□□□□□ -1.06
FN1-227ENST00000498719 IL18R1Q13478 541 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 TSTA3Q13630 321 aaPredicted RBP8.43□□□□□ -1.06
FN1-227ENST00000498719 RGS21Q2M5E4 152 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 IQCCQ4KMZ1 466 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 TMEM215Q68D42 235 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 AGTRAPQ6RW13 159 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 ZNF852Q6ZMS4 543 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 AHSA2Q719I0 299 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 CBLL1Q75N03 491 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 NKAIN4Q8IVV8 208 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 SLC43A2Q8N370 569 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 OR4K1Q8NGD4 311 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 OR8J2Q8NGG1 315 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 SP7Q8TDD2 431 aaPredicted RBP8.43□□□□□ -1.06
FN1-227ENST00000498719 ASZ1Q8WWH4 475 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 TMCO6Q96DC7 493 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 DEFB118Q96PH6 123 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 RAD9AQ99638 391 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 DUSP26Q9BV47 211 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 RIOK2Q9BVS4 552 aaKnown RBP8.43□□□□□ -1.06
FN1-227ENST00000498719 PINK1Q9BXM7 581 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 GABARAPL1Q9H0R8 117 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 LINC00597Q9H2U6 94 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 FAM83DQ9H4H8 585 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 SGK2Q9HBY8 427 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 TMEM140Q9NV12 185 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 SPATA6Q9NWH7 488 aaPredicted RBP8.43□□□□□ -1.06
FN1-227ENST00000498719 DKK4Q9UBT3 224 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 RAPGEFL1Q9UHV5 662 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 NDRG4Q9ULP0 352 aaKnown RBP8.43□□□□□ -1.06
FN1-227ENST00000498719 ALPK3Q96L96 1907 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 PLXNA2O75051 1894 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 LRRK1Q38SD2 2015 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 SZT2Q5T011 3432 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 TRAV19A0A0A6YYK7 116 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 SAP18O00422 153 aaKnown RBP8.42□□□□□ -1.06
FN1-227ENST00000498719 CASC3O15234 703 aaKnown RBP8.42□□□□□ -1.06
FN1-227ENST00000498719 FAM20BO75063 409 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 DNAJB6O75190 326 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 JRKO75564 520 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 GCM2O75603 506 aaPredicted RBP8.42□□□□□ -1.06
FN1-227ENST00000498719 LEFTY1O75610 366 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 GABARAPO95166 117 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 NADKO95544 446 aaPredicted RBP8.42□□□□□ -1.06
FN1-227ENST00000498719 ABHD16AO95870 558 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 VIPP01282 170 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 ANXA4P09525 319 aaPredicted RBP8.42□□□□□ -1.06
FN1-227ENST00000498719 MPC1LP0DKB6 136 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 TNFRSF1AP19438 455 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 FUT4P22083 530 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 MAOBP27338 520 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 OR1E2P47887 323 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 CAPZA1P52907 286 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 AP1S2P56377 157 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 RPP38P78345 283 aaKnown RBP8.42□□□□□ -1.06
FN1-227ENST00000498719 COTL1Q14019 142 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 KEAP1Q14145 624 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 MAD2L1BPQ15013 274 aaPredicted RBP8.42□□□□□ -1.06
FN1-227ENST00000498719 GAB4Q2WGN9 574 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 RIPPLY2Q5TAB7 128 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 GDPD4Q6W3E5 623 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 EIF3MQ7L2H7 374 aaKnown RBP8.42□□□□□ -1.06
FN1-227ENST00000498719 PRICKLE2Q7Z3G6 844 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 TSEN54Q7Z6J9 526 aaKnown RBP8.42□□□□□ -1.06
FN1-227ENST00000498719 NAGSQ8N159 534 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 NHLRC2Q8NBF2 726 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 SETD9Q8NE22 299 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 OR52J3Q8NH60 311 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 OR14C36Q8NHC7 312 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 RNASE8Q8TDE3 154 aaKnown RBP8.42□□□□□ -1.06
FN1-227ENST00000498719 APH1BQ8WW43 257 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 TCEAL4Q96EI5 215 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 TCTN2Q96GX1 697 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 C7orf34Q96L11 122 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 FCRL1Q96LA6 429 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 ZNF347Q96SE7 839 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 SECISBP2Q96T21 854 aaKnown RBP8.42□□□□□ -1.06
FN1-227ENST00000498719 CPEB1Q9BZB8 566 aaKnown RBP8.42□□□□□ -1.06
FN1-227ENST00000498719 REEP1Q9H902 201 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 FSCN3Q9NQT6 498 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 TRNAU1APQ9NX07 287 aaKnown RBP8.42□□□□□ -1.06
FN1-227ENST00000498719 ZSCAN32Q9NX65 697 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 SPG21Q9NZD8 308 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 OR6C2Q9NZP2 312 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 STOX2Q9P2F5 926 aaPredicted RBP8.42□□□□□ -1.06
FN1-227ENST00000498719 SLC25A13Q9UJS0 675 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 SH2B3Q9UQQ2 575 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 PCDHGB1Q9Y5G3 927 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 A0A0A6YYC8 382 aaPredicted RBP8.42□□□□□ -1.06
FN1-227ENST00000498719 TMEM247A6NEH6 219 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 TTC34A8MYJ7 566 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 CLDN25C9JDP6 229 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 NPIPB8E9PQR5 432 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 I3L1I5 382 aaPredicted RBP8.42□□□□□ -1.06
FN1-227ENST00000498719 SCAMP2O15127 329 aaKnown RBP8.42□□□□□ -1.06
FN1-227ENST00000498719 CCL16O15467 120 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 CTSAP10619 480 aa8.42□□□□□ -1.06
FN1-227ENST00000498719 APEHP13798 732 aaKnown RBP8.42□□□□□ -1.06
FN1-227ENST00000498719 C21orf33P30042 268 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms