RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 OR10H1Q9Y4A9 318 aa11.01□□□□□ -0.65
CUX1-210ENST00000497815 A0A096LPI6 279 aa11□□□□□ -0.65
CUX1-210ENST00000497815 MRASO14807 208 aa11□□□□□ -0.65
CUX1-210ENST00000497815 ZNF354AO60765 605 aaPredicted RBP11□□□□□ -0.65
CUX1-210ENST00000497815 WDPCPO95876 746 aa11□□□□□ -0.65
CUX1-210ENST00000497815 ALOX5P09917 674 aa11□□□□□ -0.65
CUX1-210ENST00000497815 ACP2P11117 423 aa11□□□□□ -0.65
CUX1-210ENST00000497815 DRD5P21918 477 aa11□□□□□ -0.65
CUX1-210ENST00000497815 PTPN6P29350 595 aa11□□□□□ -0.65
CUX1-210ENST00000497815 GABRA3P34903 492 aa11□□□□□ -0.65
CUX1-210ENST00000497815 SOX3P41225 446 aa11□□□□□ -0.65
CUX1-210ENST00000497815 PPICP45877 212 aa11□□□□□ -0.65
CUX1-210ENST00000497815 RFX3P48380 749 aa11□□□□□ -0.65
CUX1-210ENST00000497815 SSR4P51571 173 aa11□□□□□ -0.65
CUX1-210ENST00000497815 PSG6Q00889 435 aa11□□□□□ -0.65
CUX1-210ENST00000497815 OC90Q02509 493 aaPredicted RBP11□□□□□ -0.65
CUX1-210ENST00000497815 STX5Q13190 355 aa11□□□□□ -0.65
CUX1-210ENST00000497815 NFYCQ13952 458 aa11□□□□□ -0.65
CUX1-210ENST00000497815 DUSP5Q16690 384 aa11□□□□□ -0.65
CUX1-210ENST00000497815 ZNF468Q5VIY5 522 aaPredicted RBP11□□□□□ -0.65
CUX1-210ENST00000497815 NPSR1Q6W5P4 371 aa11□□□□□ -0.65
CUX1-210ENST00000497815 DHDDSQ86SQ9 333 aa11□□□□□ -0.65
CUX1-210ENST00000497815 RNF130Q86XS8 419 aa11□□□□□ -0.65
CUX1-210ENST00000497815 TAGAPQ8N103 731 aa11□□□□□ -0.65
CUX1-210ENST00000497815 LGI4Q8N135 537 aa11□□□□□ -0.65
CUX1-210ENST00000497815 FITM2Q8N6M3 262 aa11□□□□□ -0.65
CUX1-210ENST00000497815 ZNF441Q8N8Z8 693 aa11□□□□□ -0.65
CUX1-210ENST00000497815 CDRT4Q8N9R6 151 aa11□□□□□ -0.65
CUX1-210ENST00000497815 SLC16A11Q8NCK7 471 aa11□□□□□ -0.65
CUX1-210ENST00000497815 OR4N2Q8NGD1 307 aa11□□□□□ -0.65
CUX1-210ENST00000497815 OR5D16Q8NGK9 328 aa11□□□□□ -0.65
CUX1-210ENST00000497815 RP9Q8TA86 221 aaKnown RBP11□□□□□ -0.65
CUX1-210ENST00000497815 C9orf43Q8TAL5 461 aaPredicted RBP11□□□□□ -0.65
CUX1-210ENST00000497815 SLC22A8Q8TCC7 542 aa11□□□□□ -0.65
CUX1-210ENST00000497815 GPR151Q8TDV0 419 aa11□□□□□ -0.65
CUX1-210ENST00000497815 TSPEARQ8WU66 669 aa11□□□□□ -0.65
CUX1-210ENST00000497815 ASB15Q8WXK1 588 aa11□□□□□ -0.65
CUX1-210ENST00000497815 PIK3R3Q92569 461 aa11□□□□□ -0.65
CUX1-210ENST00000497815 TP53INP1Q96A56 240 aa11□□□□□ -0.65
CUX1-210ENST00000497815 RCN3Q96D15 328 aa11□□□□□ -0.65
CUX1-210ENST00000497815 BTBD9Q96Q07 612 aa11□□□□□ -0.65
CUX1-210ENST00000497815 LMF1Q96S06 567 aa11□□□□□ -0.65
CUX1-210ENST00000497815 RASL10BQ96S79 203 aa11□□□□□ -0.65
CUX1-210ENST00000497815 SMAD5Q99717 465 aaKnown RBP11□□□□□ -0.65
CUX1-210ENST00000497815 ACTRT3Q9BYD9 372 aa11□□□□□ -0.65
CUX1-210ENST00000497815 SERHL2Q9H4I8 314 aa11□□□□□ -0.65
CUX1-210ENST00000497815 GPATCH2Q9NW75 528 aa11□□□□□ -0.65
CUX1-210ENST00000497815 SLC25A37Q9NYZ2 338 aa11□□□□□ -0.65
CUX1-210ENST00000497815 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11□□□□□ -0.65
CUX1-210ENST00000497815 TP53TG5Q9Y2B4 290 aa11□□□□□ -0.65
CUX1-210ENST00000497815 GPR55Q9Y2T6 319 aaPredicted RBP11□□□□□ -0.65
CUX1-210ENST00000497815 YARS2Q9Y2Z4 477 aaKnown RBP11□□□□□ -0.65
CUX1-210ENST00000497815 PCDHB14Q9Y5E9 798 aa11□□□□□ -0.65
CUX1-210ENST00000497815 PCDHGA9Q9Y5G4 932 aaKnown RBP11□□□□□ -0.65
CUX1-210ENST00000497815 ACACBO00763 2458 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 CROCCQ5TZA2 2017 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 ANKRD11Q6UB99 2663 aaPredicted RBP10.99□□□□□ -0.65
CUX1-210ENST00000497815 GXYLT2A0PJZ3 443 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 FRG2CA6NGY1 282 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 BBIP1A8MTZ0 92 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 CAPN14A8MX76 684 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 AIM2O14862 343 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 OR6B1O95007 311 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 NADKO95544 446 aaPredicted RBP10.99□□□□□ -0.65
CUX1-210ENST00000497815 ZCCHC18P0CG32 403 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 CT45A8P0DMV1 189 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 CT45A9P0DMV2 189 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 MATN1P21941 496 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 CD96P40200 585 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 CPA2P48052 419 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 CD97P48960 835 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 NRG3P56975 720 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 DCAF7P61962 342 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 ARG2P78540 354 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 PLCXD2Q0VAA5 305 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 CAPRIN1Q14444 709 aaKnown RBP10.99□□□□□ -0.65
CUX1-210ENST00000497815 CT45A2Q5DJT8 189 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 PIGGQ5H8A4 983 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.99□□□□□ -0.658e-7■■■■■ 33
CUX1-210ENST00000497815 LRIF1Q5T3J3 769 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 SAXO2Q658L1 398 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 CDC73Q6P1J9 531 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 TNFAIP8L2Q6P589 184 aaPredicted RBP10.99□□□□□ -0.65
CUX1-210ENST00000497815 IL20RBQ6UXL0 311 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 ASB18Q6ZVZ8 466 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 GALNT10Q86SR1 603 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 MSRB3Q8IXL7 192 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 ARMC10Q8N2F6 343 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 COX18Q8N8Q8 333 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 EXD3Q8N9H8 876 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 OR5M3Q8NGP4 307 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 ADAMTS15Q8TE58 950 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 ZFP90Q8TF47 636 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 CDS1Q92903 461 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 TMBIM1Q969X1 311 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 CMTM5Q96DZ9 223 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 NEURL3Q96EH8 262 aa10.99□□□□□ -0.65
CUX1-210ENST00000497815 UTP23Q9BRU9 249 aaKnown RBP10.99□□□□□ -0.65
CUX1-210ENST00000497815 LMF2Q9BU23 707 aaKnown RBP10.99□□□□□ -0.65
CUX1-210ENST00000497815 TRIM8Q9BZR9 551 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms