RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 C15orf32Q32M92 178 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 FAM133BQ5BKY9 247 aaKnown RBP3.34□□□□□ -1.87
TRIM4-205ENST00000496896 FKBP1CQ5VVH2 108 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 AP1ARQ63HQ0 302 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 TTC27Q6P3X3 843 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 C4orf22Q6V702 233 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 RBPMS2Q6ZRY4 209 aaKnown RBP3.34□□□□□ -1.87
TRIM4-205ENST00000496896 ZBTB49Q6ZSB9 765 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 CDHR3Q6ZTQ4 885 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 SLC24A5Q71RS6 500 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 PHLDB2Q86SQ0 1253 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 PHF13Q86YI8 300 aaPredicted RBP3.34□□□□□ -1.87
TRIM4-205ENST00000496896 C4orf19Q8IY42 314 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 MCOLN2Q8IZK6 566 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 LZICQ8WZA0 190 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 TOMM40LQ969M1 308 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 PDLIM5Q96HC4 596 aaKnown RBP3.34□□□□□ -1.87
TRIM4-205ENST00000496896 ATF6BQ99941 703 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 LXNQ9BS40 222 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 SLC2A11Q9BYW1 496 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 SDCBP2Q9H190 292 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 GOLPH3Q9H4A6 298 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 SUDS3Q9H7L9 328 aaPredicted RBP3.34□□□□□ -1.87
TRIM4-205ENST00000496896 DNAJC4Q9NNZ3 241 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 MRGBPQ9NV56 204 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 PARVAQ9NVD7 372 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.34□□□□□ -1.87
TRIM4-205ENST00000496896 NINJ2Q9NZG7 142 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 ADAM22Q9P0K1 906 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 THAP10Q9P2Z0 257 aaPredicted RBP3.34□□□□□ -1.87
TRIM4-205ENST00000496896 IL36AQ9UHA7 158 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 ANAPC7Q9UJX3 599 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 ANGPTL2Q9UKU9 493 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 SIPA1L1O43166 1804 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 CLUHO75153 1309 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 IGSF9BQ9UPX0 1349 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 ZNF318Q5VUA4 2279 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 UBR3Q6ZT12 1888 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 IQANK1A0A1B0GTG1 560 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 RSPH10B2B2RC85 870 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 SRRM5B3KS81 715 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 E7ESA3 106 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 DNALI1O14645 258 aaPredicted RBP3.33□□□□□ -1.88
TRIM4-205ENST00000496896 ALOX15BO15296 676 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 NVLO15381 856 aaKnown RBP3.33□□□□□ -1.88
TRIM4-205ENST00000496896 CLDN3O15551 220 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 TYROBPO43914 113 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 DIAPH2O60879 1101 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 FKBP6O75344 327 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 STAM2O75886 525 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 ACSL3O95573 720 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 NDUFB10O96000 172 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 CALB1P05937 261 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 KRT7P08729 469 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 RSPH10BP0C881 870 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 FOLR2P14207 255 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 NMT1P30419 496 aaKnown RBP3.33□□□□□ -1.88
TRIM4-205ENST00000496896 PCK1P35558 622 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 MAGEA4P43358 317 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 QARSP47897 775 aaKnown RBP3.33□□□□□ -1.88
TRIM4-205ENST00000496896 IFNAR2P48551 515 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 RAP1GDS1P52306 607 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 KRTAP10-8P60410 259 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 YWHAEP62258 255 aaKnown RBP3.33□□□□□ -1.88
TRIM4-205ENST00000496896 KCNJ2P63252 427 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 DLK1P80370 383 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 DHODHQ02127 395 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 RASGEF1BQ0VAM2 473 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 ILF2Q12905 390 aaKnown RBP3.33□□□□□ -1.88
TRIM4-205ENST00000496896 RALGDSQ12967 914 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 DNAJC3Q13217 504 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 PIGHQ14442 188 aaPredicted RBP3.33□□□□□ -1.88
TRIM4-205ENST00000496896 SNRNP35Q16560 246 aaKnown RBP3.33□□□□□ -1.88
TRIM4-205ENST00000496896 TRMT5Q32P41 509 aaKnown RBP3.33□□□□□ -1.88
TRIM4-205ENST00000496896 DNAL1Q4LDG9 190 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 LGSNQ5TDP6 509 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 HHATQ5VTY9 493 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 PRR5LQ6MZQ0 368 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 APOBEC3HQ6NTF7 200 aaKnown RBP3.33□□□□□ -1.88
TRIM4-205ENST00000496896 CFAP161Q6P656 301 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 PRSS55Q6UWB4 352 aaPredicted RBP3.33□□□□□ -1.88
TRIM4-205ENST00000496896 OTUD6AQ7L8S5 288 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 MIER3Q7Z3K6 550 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 ERICH1Q86X53 443 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 ECHDC2Q86YB7 292 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 TMEM126BQ8IUX1 230 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 CCDC60Q8IWA6 550 aaPredicted RBP3.33□□□□□ -1.88
TRIM4-205ENST00000496896 ALLCQ8N6M5 410 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 C10orf82Q8WW14 230 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 DNAJC9Q8WXX5 260 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 KRT35Q92764 455 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 STMN2Q93045 179 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 TSACCQ96A04 125 aaPredicted RBP3.33□□□□□ -1.88
TRIM4-205ENST00000496896 LRRC39Q96DD0 335 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 ERP27Q96DN0 273 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 CDHR1Q96JP9 859 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 LINC00615Q96LM1 132 aaPredicted RBP3.33□□□□□ -1.88
TRIM4-205ENST00000496896 OLFM3Q96PB7 478 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 BTBD9Q96Q07 612 aa3.33□□□□□ -1.88
TRIM4-205ENST00000496896 TSC22D3Q99576 134 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms