RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 RPA1P27694 616 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 TMOD1P28289 359 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 SLC26A5P58743 744 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 HKDC1Q2TB90 917 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 AGKQ53H12 422 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 HERC4Q5GLZ8 1057 aaPredicted RBP3.54□□□□□ -1.84
SMC4-224ENST00000494612 CNSTQ6PJW8 725 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 PRSS48Q7RTY5 328 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 LMNTD2Q8IXW0 634 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 SUMF1Q8NBK3 374 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 PYGO2Q9BRQ0 406 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 PNNQ9H307 717 aaKnown RBP3.54□□□□□ -1.84
SMC4-224ENST00000494612 HOMER3Q9NSC5 361 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 ZNF446Q9NWS9 450 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.54□□□□□ -1.84
SMC4-224ENST00000494612 CCPG1Q9ULG6 757 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 SHPRHQ149N8 1683 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 PIK3C2BO00750 1634 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 SRCAPQ6ZRS2 3230 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 EHBP1L1Q8N3D4 1523 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 NKTRP30414 1462 aaKnown RBP3.54□□□□□ -1.84
SMC4-224ENST00000494612 CAMSAP2Q08AD1 1489 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 NCOA2Q15596 1464 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 ARHGAP23Q9P227 1491 aa3.54□□□□□ -1.84
SMC4-224ENST00000494612 FGD6Q6ZV73 1430 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 TMEM2Q9UHN6 1383 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 KDM5AP29375 1690 aaKnown RBP3.53□□□□□ -1.84
SMC4-224ENST00000494612 EIF2AK4Q9P2K8 1649 aaKnown RBP3.53□□□□□ -1.84
SMC4-224ENST00000494612 IGHV3-16A0A0C4DH30 117 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 A0A0J9YVX5 310 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 H3BMH7 237 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 RANBP6O60518 1105 aaKnown RBP3.53□□□□□ -1.84
SMC4-224ENST00000494612 IGHG1P01857 330 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 HCKP08631 526 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 FCGR3AP08637 254 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 SERPINF2P08697 491 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 HOXD4P09016 255 aaPredicted RBP3.53□□□□□ -1.84
SMC4-224ENST00000494612 CCDC159P0C7I6 412 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 FOSL2P15408 326 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 UCP1P25874 307 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 SLC7A2P52569 658 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 SSTP61278 116 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 CDKL1Q00532 357 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 IL1RL1Q01638 556 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 CRMP1Q14194 572 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 ABRAXAS2Q15018 415 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 RFWD3Q6PCD5 774 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 ZCCHC12Q6PEW1 402 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 APOOLQ6UXV4 268 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 SLC22A16Q86VW1 577 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 ELMOD2Q8IZ81 293 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 PYROXD2Q8N2H3 581 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 ZNF491Q8N8L2 437 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 MLKLQ8NB16 471 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 C17orf47Q8NEP4 570 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 ZNF671Q8TAW3 534 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 FCGR1BQ92637 280 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 CAPNS2Q96L46 248 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 CBWD1Q9BRT8 395 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 APOOQ9BUR5 198 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 RAB11FIP5Q9BXF6 653 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 PUS3Q9BZE2 481 aaKnown RBP3.53□□□□□ -1.84
SMC4-224ENST00000494612 KRT23Q9C075 422 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 Q9HAA7 133 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 LHX3Q9UBR4 397 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 ZNF175Q9Y473 711 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 EFCAB6Q5THR3 1501 aa3.53□□□□□ -1.84
SMC4-224ENST00000494612 RGS12O14924 1447 aa3.53□□□□□ -1.85
SMC4-224ENST00000494612 NWD1Q149M9 1564 aa3.52□□□□□ -1.85
SMC4-224ENST00000494612 SETBP1Q9Y6X0 1596 aa3.52□□□□□ -1.85
SMC4-224ENST00000494612 RNF103-CHMP3A0A140T963 221 aa3.52□□□□□ -1.85
SMC4-224ENST00000494612 A0A1W2PPR1 153 aa3.52□□□□□ -1.85
SMC4-224ENST00000494612 RNF212BA8MTL3 300 aa3.52□□□□□ -1.85
SMC4-224ENST00000494612 SRRM5B3KS81 715 aa3.52□□□□□ -1.85
SMC4-224ENST00000494612 EI24O14681 340 aa3.52□□□□□ -1.85
SMC4-224ENST00000494612 CFLARO15519 480 aa3.52□□□□□ -1.85
SMC4-224ENST00000494612 VENTXO95231 258 aa3.52□□□□□ -1.85
SMC4-224ENST00000494612 APRTP07741 180 aa3.52□□□□□ -1.85
SMC4-224ENST00000494612 ACP1P24666 158 aa3.52□□□□□ -1.85
SMC4-224ENST00000494612 MAPK3P27361 379 aaPredicted RBP3.52□□□□□ -1.85
SMC4-224ENST00000494612 NDST1P52848 882 aa3.52□□□□□ -1.85
SMC4-224ENST00000494612 ATXN3P54252 364 aaPredicted RBP3.52□□□□□ -1.85
SMC4-224ENST00000494612 STARD6P59095 220 aa3.52□□□□□ -1.85
SMC4-224ENST00000494612 MYBPC1Q00872 1141 aa3.52□□□□□ -1.85
SMC4-224ENST00000494612 NME3Q13232 169 aa3.52□□□□□ -1.85
SMC4-224ENST00000494612 CCL14Q16627 93 aa3.52□□□□□ -1.85
SMC4-224ENST00000494612 FAM219BQ5XKK7 198 aa3.52□□□□□ -1.85
SMC4-224ENST00000494612 ARMCX5Q6P1M9 558 aa3.52□□□□□ -1.85
SMC4-224ENST00000494612 CWC27Q6UX04 472 aaKnown RBP3.52□□□□□ -1.85
SMC4-224ENST00000494612 GPR142Q7Z601 462 aa3.52□□□□□ -1.85
SMC4-224ENST00000494612 OR4F17Q8NGA8 305 aa3.52□□□□□ -1.85
SMC4-224ENST00000494612 OR2L2Q8NH16 312 aa3.52□□□□□ -1.85
SMC4-224ENST00000494612 OR52J3Q8NH60 311 aa3.52□□□□□ -1.85
SMC4-224ENST00000494612 FAM222BQ8WU58 562 aa3.52□□□□□ -1.85
SMC4-224ENST00000494612 TMEM186Q96B77 213 aa3.52□□□□□ -1.85
SMC4-224ENST00000494612 BIRC7Q96CA5 298 aa3.52□□□□□ -1.85
SMC4-224ENST00000494612 OR4F4Q96R69 305 aa3.52□□□□□ -1.85
SMC4-224ENST00000494612 TRIM6Q9C030 488 aaPredicted RBP3.52□□□□□ -1.85
SMC4-224ENST00000494612 SOHLH2Q9NX45 425 aa3.52□□□□□ -1.85
SMC4-224ENST00000494612 CNOT2Q9NZN8 540 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms