RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 ART3Q13508 389 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 LASP1Q14847 261 aaKnown RBP7.04□□□□□ -1.28
VEGFA-214ENST00000493786 NNATQ16517 81 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 TRMT5Q32P41 509 aaKnown RBP7.04□□□□□ -1.28
VEGFA-214ENST00000493786 LACTB2Q53H82 288 aaPredicted RBP7.04□□□□□ -1.28
VEGFA-214ENST00000493786 PIGGQ5H8A4 983 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 COQ5Q5HYK3 327 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 ATAD3BQ5T9A4 648 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 B3GNTL1Q67FW5 361 aaPredicted RBP7.04□□□□□ -1.28
VEGFA-214ENST00000493786 REP15Q6BDI9 236 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 MFSD12Q6NUT3 480 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 H3F3CQ6NXT2 135 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 C6orf120Q7Z4R8 191 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 HPS6Q86YV9 775 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 GPALPP1Q8IXQ4 340 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 DND1Q8IYX4 353 aaKnown RBP7.04□□□□□ -1.28
VEGFA-214ENST00000493786 BEST3Q8N1M1 668 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 ZADH2Q8N4Q0 377 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 POU5F2Q8N7G0 328 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 COX18Q8N8Q8 333 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 C9orf43Q8TAL5 461 aaPredicted RBP7.04□□□□□ -1.28
VEGFA-214ENST00000493786 FBXO30Q8TB52 745 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 GPR151Q8TDV0 419 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 ADAMTS15Q8TE58 950 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 NEURL3Q96EH8 262 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 HSPBAP1Q96EW2 488 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 CRELD1Q96HD1 420 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 VSTM2LQ96N03 204 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 BTBD9Q96Q07 612 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 LMF1Q96S06 567 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 SMAD5Q99717 465 aaKnown RBP7.04□□□□□ -1.28
VEGFA-214ENST00000493786 UTP23Q9BRU9 249 aaKnown RBP7.04□□□□□ -1.28
VEGFA-214ENST00000493786 YIPF4Q9BSR8 244 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 CCDC106Q9BWC9 280 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 ACTRT3Q9BYD9 372 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.04□□□□□ -1.281e-7■□□□□ 9.4
VEGFA-214ENST00000493786 MYLK2Q9H1R3 596 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 ZNF552Q9H707 407 aaPredicted RBP7.04□□□□□ -1.28
VEGFA-214ENST00000493786 LIN28AQ9H9Z2 209 aaKnown RBP7.04□□□□□ -1.28
VEGFA-214ENST00000493786 IL1RL2Q9HB29 575 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 SERHLQ9NQF3 203 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 EXD2Q9NVH0 621 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 HPF1Q9NWY4 346 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 NTMQ9P121 344 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 TUBD1Q9UJT1 453 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 ERVK-11Q9UQG0 969 aa7.04□□□□□ -1.28
VEGFA-214ENST00000493786 ASPDHA6ND91 283 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 TP53I11O14683 189 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 AIM2O14862 343 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 HS6ST1O60243 411 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 DPM1O60762 260 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 REM1O75628 298 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 AK1P00568 194 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 NPPAP01160 153 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 FAM87AP0C7U9 286 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 ATP6V1C1P21283 382 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 GABRA3P34903 492 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 TRHRP34981 398 aaPredicted RBP7.03□□□□□ -1.28
VEGFA-214ENST00000493786 MAGEA8P43361 318 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 CYB561P49447 251 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 POU6F2P78424 691 aaPredicted RBP7.03□□□□□ -1.28
VEGFA-214ENST00000493786 CBX1P83916 185 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 DUSP8Q13202 625 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 TLR1Q15399 786 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 DECR1Q16698 335 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 CYP27C1Q4G0S4 372 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 PAGE3Q5JUK9 113 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 LRIF1Q5T3J3 769 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 SAXO2Q658L1 398 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 CDC73Q6P1J9 531 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 TNFAIP8L2Q6P589 184 aaPredicted RBP7.03□□□□□ -1.28
VEGFA-214ENST00000493786 ASB18Q6ZVZ8 466 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 C16orf62Q7Z3J2 963 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 SLC34A3Q8N130 599 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 CYP4Z2PQ8N1L4 340 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 CLEC4FQ8N1N0 589 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 DPP10Q8N608 796 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 ZNF441Q8N8Z8 693 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 SIMC1Q8NDZ2 872 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 ZFP90Q8TF47 636 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 PSMF1Q92530 271 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 ADIPOR1Q96A54 375 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 TMEM125Q96AQ2 219 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 ROPN1LQ96C74 230 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 RCN3Q96D15 328 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 RMND5BQ96G75 393 aaPredicted RBP7.03□□□□□ -1.28
VEGFA-214ENST00000493786 ABHD17AQ96GS6 310 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 C5orf34Q96MH7 638 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 PHF12Q96QT6 1004 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 RASL10BQ96S79 203 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 STACQ99469 402 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 CGREF1Q99674 301 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 NPAS2Q99743 824 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 SH3GL1Q99961 368 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 LMF2Q9BU23 707 aaKnown RBP7.03□□□□□ -1.28
VEGFA-214ENST00000493786 G6PC3Q9BUM1 346 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 PAIP1Q9H074 479 aaKnown RBP7.03□□□□□ -1.28
VEGFA-214ENST00000493786 RNF32Q9H0A6 362 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 NXF5Q9H1B4 397 aaKnown RBP7.03□□□□□ -1.28
VEGFA-214ENST00000493786 OR51I1Q9H343 314 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms