RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, human

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG7-208	ENST00000493609	SLCO4A1	Q96BD0	722 aa		4.63	□□□□□ -1.67
SMG7-208	ENST00000493609	RAB39B	Q96DA2	213 aa		4.63	□□□□□ -1.67
SMG7-208	ENST00000493609	PUS3	Q9BZE2	481 aa	Known RBP	4.63	□□□□□ -1.67
SMG7-208	ENST00000493609	CARD9	Q9H257	536 aa		4.63	□□□□□ -1.67
SMG7-208	ENST00000493609	TMEM245	Q9H330	911 aa		4.63	□□□□□ -1.67
SMG7-208	ENST00000493609	PRMT8	Q9NR22	394 aa	Predicted RBP	4.63	□□□□□ -1.67
SMG7-208	ENST00000493609	FETUB	Q9UGM5	382 aa		4.63	□□□□□ -1.67
SMG7-208	ENST00000493609	NARF	Q9UHQ1	456 aa		4.63	□□□□□ -1.67
SMG7-208	ENST00000493609	TRMT6	Q9UJA5	497 aa	Known RBP	4.63	□□□□□ -1.67
SMG7-208	ENST00000493609	CSAG2	Q9Y5P2	127 aa		4.63	□□□□□ -1.67
SMG7-208	ENST00000493609	MAPK8IP3	Q9UPT6	1336 aa		4.63	□□□□□ -1.67
SMG7-208	ENST00000493609	RREB1	Q92766	1687 aa		4.63	□□□□□ -1.67
SMG7-208	ENST00000493609	KIAA0232	Q92628	1395 aa		4.63	□□□□□ -1.67
SMG7-208	ENST00000493609	MAP3K5	Q99683	1374 aa		4.63	□□□□□ -1.67
SMG7-208	ENST00000493609	PXDNL	A1KZ92	1463 aa		4.62	□□□□□ -1.67
SMG7-208	ENST00000493609	MEGF6	O75095	1541 aa		4.62	□□□□□ -1.67
SMG7-208	ENST00000493609	MACROD2	A1Z1Q3	448 aa		4.62	□□□□□ -1.67
SMG7-208	ENST00000493609	MEI4	A8MW99	385 aa		4.62	□□□□□ -1.67
SMG7-208	ENST00000493609	EEF2K	O00418	725 aa	Known RBP	4.62	□□□□□ -1.67
SMG7-208	ENST00000493609	MBL2	P11226	248 aa	Predicted RBP	4.62	□□□□□ -1.67
SMG7-208	ENST00000493609	FOLR2	P14207	255 aa		4.62	□□□□□ -1.67
SMG7-208	ENST00000493609	FOSL2	P15408	326 aa		4.62	□□□□□ -1.67
SMG7-208	ENST00000493609	FCAR	P24071	287 aa		4.62	□□□□□ -1.67
SMG7-208	ENST00000493609	SPR	P35270	261 aa	Predicted RBP	4.62	□□□□□ -1.67
SMG7-208	ENST00000493609	ACADSB	P45954	432 aa		4.62	□□□□□ -1.67
SMG7-208	ENST00000493609	NT5C2	P49902	561 aa		4.62	□□□□□ -1.67
SMG7-208	ENST00000493609	SLC8A3	P57103	927 aa		4.62	□□□□□ -1.67
SMG7-208	ENST00000493609	KRTAP10-5	P60370	271 aa		4.62	□□□□□ -1.67
SMG7-208	ENST00000493609	SLC1A5	Q15758	541 aa		4.62	□□□□□ -1.67
SMG7-208	ENST00000493609	AGAP7P	Q5VUJ5	663 aa		4.62	□□□□□ -1.67
SMG7-208	ENST00000493609	NKAIN2	Q5VXU1	208 aa		4.62	□□□□□ -1.67
SMG7-208	ENST00000493609	CDC42EP5	Q6NZY7	148 aa		4.62	□□□□□ -1.67
SMG7-208	ENST00000493609	SAMD12	Q8N8I0	201 aa		4.62	□□□□□ -1.67
SMG7-208	ENST00000493609	RTL3	Q8N8U3	475 aa	Known RBP	4.62	□□□□□ -1.67
SMG7-208	ENST00000493609	CSNK1G2-AS1	Q8NCQ2	148 aa		4.62	□□□□□ -1.67
SMG7-208	ENST00000493609	TOMM40L	Q969M1	308 aa		4.62	□□□□□ -1.67
SMG7-208	ENST00000493609	NAP1L3	Q99457	506 aa	Predicted RBP	4.62	□□□□□ -1.67
SMG7-208	ENST00000493609	SPAG8	Q99932	426 aa	Predicted RBP	4.62	□□□□□ -1.67
SMG7-208	ENST00000493609	THAP9	Q9H5L6	903 aa		4.62	□□□□□ -1.67
SMG7-208	ENST00000493609	RPS10P5	Q9NQ39	176 aa		4.62	□□□□□ -1.67
SMG7-208	ENST00000493609	EIF3K	Q9UBQ5	218 aa	Known RBP	4.62	□□□□□ -1.67
SMG7-208	ENST00000493609	MRPS2	Q9Y399	296 aa	Known RBP	4.62	□□□□□ -1.67
SMG7-208	ENST00000493609	NHS	Q6T4R5	1651 aa		4.61	□□□□□ -1.67
SMG7-208	ENST00000493609	SYCE3	A1L190	88 aa		4.61	□□□□□ -1.67
SMG7-208	ENST00000493609	BCLAF3	A2AJT9	711 aa	Known RBP	4.61	□□□□□ -1.67
SMG7-208	ENST00000493609	PHF1	O43189	567 aa	Predicted RBP	4.61	□□□□□ -1.67
SMG7-208	ENST00000493609	HSF2BP	O75031	334 aa		4.61	□□□□□ -1.67
SMG7-208	ENST00000493609	REN	P00797	406 aa		4.61	□□□□□ -1.67
SMG7-208	ENST00000493609	IGHG3	P01860	377 aa		4.61	□□□□□ -1.67
SMG7-208	ENST00000493609	MT-ND1	P03886	318 aa		4.61	□□□□□ -1.67
SMG7-208	ENST00000493609	CCDC159	P0C7I6	412 aa		4.61	□□□□□ -1.67
SMG7-208	ENST00000493609	ZNF853	P0CG23	659 aa		4.61	□□□□□ -1.67
SMG7-208	ENST00000493609	ZNF18	P17022	549 aa		4.61	□□□□□ -1.67
SMG7-208	ENST00000493609	PRKAR2B	P31323	418 aa		4.61	□□□□□ -1.67
SMG7-208	ENST00000493609	ALDH3B1	P43353	468 aa		4.61	□□□□□ -1.67
SMG7-208	ENST00000493609	HNRNPF	P52597	415 aa	Known RBP	4.61	□□□□□ -1.67
SMG7-208	ENST00000493609	RPS4X	P62701	263 aa	Known RBP	4.61	□□□□□ -1.67
SMG7-208	ENST00000493609	PPP1R8	Q12972	351 aa	Known RBP	4.61	□□□□□ -1.67
SMG7-208	ENST00000493609	TSTA3	Q13630	321 aa	Predicted RBP	4.61	□□□□□ -1.67
SMG7-208	ENST00000493609	CYLC2	Q14093	348 aa	Predicted RBP	4.61	□□□□□ -1.67
SMG7-208	ENST00000493609	EMC2	Q15006	297 aa		4.61	□□□□□ -1.67
SMG7-208	ENST00000493609	UNC50	Q53HI1	259 aa		4.61	□□□□□ -1.67
SMG7-208	ENST00000493609	WDR25	Q64LD2	544 aa	Predicted RBP	4.61	□□□□□ -1.67
SMG7-208	ENST00000493609	ETFRF1	Q6IPR1	90 aa		4.61	□□□□□ -1.67
SMG7-208	ENST00000493609	STEAP1B	Q6NZ63	245 aa		4.61	□□□□□ -1.67
SMG7-208	ENST00000493609	LINC00518	Q8N0U6	118 aa		4.61	□□□□□ -1.67
SMG7-208	ENST00000493609	EEF2KMT	Q96G04	330 aa		4.61	□□□□□ -1.67
SMG7-208	ENST00000493609	PYGO2	Q9BRQ0	406 aa		4.61	□□□□□ -1.67
SMG7-208	ENST00000493609	DCTN5	Q9BTE1	182 aa		4.61	□□□□□ -1.67
SMG7-208	ENST00000493609	TEX13A	Q9BXU3	409 aa	Predicted RBP	4.61	□□□□□ -1.67
SMG7-208	ENST00000493609	TRPV6	Q9H1D0	765 aa		4.61	□□□□□ -1.67
SMG7-208	ENST00000493609	TAS2R16	Q9NYV7	291 aa		4.61	□□□□□ -1.67
SMG7-208	ENST00000493609	DOT1L	Q8TEK3	1739 aa		4.6	□□□□□ -1.67
SMG7-208	ENST00000493609	ITGB4	P16144	1822 aa		4.6	□□□□□ -1.67
SMG7-208	ENST00000493609	TSPAN2	O60636	221 aa		4.6	□□□□□ -1.67
SMG7-208	ENST00000493609	BAG2	O95816	211 aa		4.6	□□□□□ -1.67
SMG7-208	ENST00000493609	SERPINF2	P08697	491 aa		4.6	□□□□□ -1.67
SMG7-208	ENST00000493609	HOXB7	P09629	217 aa		4.6	□□□□□ -1.67
SMG7-208	ENST00000493609	TRIM23	P36406	574 aa		4.6	□□□□□ -1.67
SMG7-208	ENST00000493609	TNFRSF4	P43489	277 aa		4.6	□□□□□ -1.67
SMG7-208	ENST00000493609	KRTAP10-12	P60413	245 aa		4.6	□□□□□ -1.67
SMG7-208	ENST00000493609	SRP54	P61011	504 aa	Known RBP	4.6	□□□□□ -1.67
SMG7-208	ENST00000493609	KLF5	Q13887	457 aa	Predicted RBP	4.6	□□□□□ -1.67
SMG7-208	ENST00000493609	LIPJ	Q5W064	366 aa		4.6	□□□□□ -1.67
SMG7-208	ENST00000493609	DLEU7	Q6UYE1	221 aa		4.6	□□□□□ -1.67
SMG7-208	ENST00000493609	RABEPK	Q7Z6M1	372 aa		4.6	□□□□□ -1.67
SMG7-208	ENST00000493609	FBXO25	Q8TCJ0	367 aa		4.6	□□□□□ -1.67
SMG7-208	ENST00000493609	URGCP	Q8TCY9	931 aa		4.6	□□□□□ -1.67
SMG7-208	ENST00000493609	RBM24	Q9BX46	236 aa	Known RBP	4.6	□□□□□ -1.67
SMG7-208	ENST00000493609	IL1RL2	Q9HB29	575 aa		4.6	□□□□□ -1.67
SMG7-208	ENST00000493609	ZNF446	Q9NWS9	450 aa		4.6	□□□□□ -1.67
SMG7-208	ENST00000493609	VPS54	Q9P1Q0	977 aa		4.6	□□□□□ -1.67
SMG7-208	ENST00000493609	COPS7A	Q9UBW8	275 aa		4.6	□□□□□ -1.67
SMG7-208	ENST00000493609	FAM153A	Q9UHL3	310 aa		4.6	□□□□□ -1.67
SMG7-208	ENST00000493609	STRAP	Q9Y3F4	350 aa	Known RBP	4.6	□□□□□ -1.67
SMG7-208	ENST00000493609	RGS12	O14924	1447 aa		4.6	□□□□□ -1.67
SMG7-208	ENST00000493609		K7ERI5	159 aa		4.59	□□□□□ -1.67
SMG7-208	ENST00000493609	CHEK1	O14757	476 aa		4.59	□□□□□ -1.67
SMG7-208	ENST00000493609	SH2D1B	O14796	132 aa		4.59	□□□□□ -1.67
SMG7-208	ENST00000493609	KDM6A	O15550	1401 aa	Predicted RBP	4.59	□□□□□ -1.67

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