RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 PLA2G12AQ9BZM1 189 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 FBXO44Q9H4M3 255 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 CTPS2Q9NRF8 586 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 FBXW2Q9UKT8 454 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 FLVCR2Q9UPI3 526 aa11.05□□□□□ -0.64
HDAC4-210ENST00000493582 PCDHGA9Q9Y5G4 932 aaKnown RBP11.05□□□□□ -0.64
HDAC4-210ENST00000493582 MTMR11A4FU01 709 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 M0QZQ0 153 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 CTSHP09668 335 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 GJA1P17302 382 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 SLC1A3P43003 542 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 OR10A3P58181 314 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 RAB40BQ12829 278 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 ELOAQ14241 798 aaKnown RBP11.04□□□□□ -0.64
HDAC4-210ENST00000493582 FAM27D1Q5T7N8 215 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 NCEH1Q6PIU2 408 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 OAFQ86UD1 273 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 OXR1Q8N573 874 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 ZNF485Q8NCK3 441 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 ADAMTS19Q8TE59 1207 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 WDR89Q96FK6 387 aaPredicted RBP11.04□□□□□ -0.64
HDAC4-210ENST00000493582 UBL7Q96S82 380 aaPredicted RBP11.04□□□□□ -0.64
HDAC4-210ENST00000493582 DMRTA2Q96SC8 542 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 SECISBP2Q96T21 854 aaKnown RBP11.04□□□□□ -0.64
HDAC4-210ENST00000493582 SLC12A9Q9BXP2 914 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 ANGPT4Q9Y264 503 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 RASD1Q9Y272 281 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 TP53BP1Q12888 1972 aaPredicted RBP11.04□□□□□ -0.64
HDAC4-210ENST00000493582 FAM74A7A6NL05 159 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 KDM4BO94953 1096 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 CD160O95971 181 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 F2P00734 622 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 ZNF8P17098 575 aaPredicted RBP11.04□□□□□ -0.64
HDAC4-210ENST00000493582 MMP11P24347 488 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 ASMTP46597 345 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 FAM74A3Q4VXF1 159 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 CDKL4Q5MAI5 379 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 TNFAIP8L2Q6P589 184 aaPredicted RBP11.04□□□□□ -0.64
HDAC4-210ENST00000493582 Q6ZTK2 550 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 ZER1Q7Z7L7 766 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 KLBQ86Z14 1044 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 UXS1Q8NBZ7 420 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 APOBEC4Q8WW27 367 aaKnown RBP11.04□□□□□ -0.64
HDAC4-210ENST00000493582 PIGKQ92643 395 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 DPYSL5Q9BPU6 564 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 SEC22CQ9BRL7 303 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 TM6SF2Q9BZW4 377 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 SERHL2Q9H4I8 314 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 C11orf49Q9H6J7 331 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 EGLN3Q9H6Z9 239 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 SGK2Q9HBY8 427 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 FANCFQ9NPI8 374 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 CD93Q9NPY3 652 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 PTGFRNQ9P2B2 879 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 FCF1Q9Y324 198 aaKnown RBP11.04□□□□□ -0.64
HDAC4-210ENST00000493582 CHURC1-FNTBB4DL54 471 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 H3BNC9 293 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 DNASE2O00115 360 aaPredicted RBP11.04□□□□□ -0.64
HDAC4-210ENST00000493582 ZNF593O00488 134 aaPredicted RBP11.04□□□□□ -0.64
HDAC4-210ENST00000493582 FAAHO00519 579 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 SOX30O94993 753 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 WDPCPO95876 746 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 URODP06132 367 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 BCHEP06276 602 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 RHOCP08134 193 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 ARAFP10398 606 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 ATP5A1P25705 553 aaKnown RBP11.04□□□□□ -0.64
HDAC4-210ENST00000493582 ACSL1P33121 698 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 C21orf58P58505 322 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 ARF5P84085 180 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 DGCR2P98153 550 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 ZNF155Q12901 538 aaPredicted RBP11.04□□□□□ -0.64
HDAC4-210ENST00000493582 VASNQ6EMK4 673 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 FAM198BQ6UWH4 519 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 RRM2BQ7LG56 351 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 LSRQ86X29 649 aaPredicted RBP11.04□□□□□ -0.64
HDAC4-210ENST00000493582 CLRN3Q8NCR9 226 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 TRPV1Q8NER1 839 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 RPLP0P6Q8NHW5 317 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 ASB12Q8WXK4 309 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 RAB8BQ92930 207 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 SMAD5Q99717 465 aaKnown RBP11.04□□□□□ -0.64
HDAC4-210ENST00000493582 FGF20Q9NP95 211 aaPredicted RBP11.04□□□□□ -0.64
HDAC4-210ENST00000493582 MRPL15Q9P015 296 aaKnown RBP11.04□□□□□ -0.64
HDAC4-210ENST00000493582 PFDN2Q9UHV9 154 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 GPR160Q9UJ42 338 aa11.04□□□□□ -0.64
HDAC4-210ENST00000493582 L7N2F9 121 aa11.03□□□□□ -0.64
HDAC4-210ENST00000493582 INPPL1O15357 1258 aa11.03□□□□□ -0.64
HDAC4-210ENST00000493582 PRODHO43272 600 aa11.03□□□□□ -0.64
HDAC4-210ENST00000493582 IGLV3-27P01718 113 aa11.03□□□□□ -0.64
HDAC4-210ENST00000493582 TFP02787 698 aa11.03□□□□□ -0.64
HDAC4-210ENST00000493582 PCSK2P16519 638 aa11.03□□□□□ -0.64
HDAC4-210ENST00000493582 SHC1P29353 583 aa11.03□□□□□ -0.64
HDAC4-210ENST00000493582 RFX3P48380 749 aa11.03□□□□□ -0.64
HDAC4-210ENST00000493582 CSNK1DP48730 415 aa11.03□□□□□ -0.64
HDAC4-210ENST00000493582 EFNB1P98172 346 aa11.03□□□□□ -0.64
HDAC4-210ENST00000493582 TAP2Q03519 686 aa11.03□□□□□ -0.64
HDAC4-210ENST00000493582 MAP4K2Q12851 820 aa11.03□□□□□ -0.64
HDAC4-210ENST00000493582 PRSS53Q2L4Q9 553 aa11.03□□□□□ -0.64
HDAC4-210ENST00000493582 EOGTQ5NDL2 527 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms