RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 SACM1LQ9NTJ5 587 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 DCTN4Q9UJW0 460 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 VPS4AQ9UN37 437 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 TNRC6AQ8NDV7 1962 aaKnown RBP12.87□□□□□ -0.35
CCM2-217ENST00000492883 PRSS51A0A1B0GVH4 220 aa12.87□□□□□ -0.35
CCM2-217ENST00000492883 G3V3Y1 287 aa12.87□□□□□ -0.35
CCM2-217ENST00000492883 J3QKU1 62 aa12.87□□□□□ -0.35
CCM2-217ENST00000492883 RNASET2O00584 256 aaKnown RBP12.87□□□□□ -0.35
CCM2-217ENST00000492883 REM1O75628 298 aa12.87□□□□□ -0.35
CCM2-217ENST00000492883 CCL3P10147 92 aa12.87□□□□□ -0.35
CCM2-217ENST00000492883 NAGAP17050 411 aa12.87□□□□□ -0.35
CCM2-217ENST00000492883 CNR1P21554 472 aa12.87□□□□□ -0.35
CCM2-217ENST00000492883 KRT20P35900 424 aa12.87□□□□□ -0.35
CCM2-217ENST00000492883 MDH1P40925 334 aaKnown RBP12.87□□□□□ -0.35
CCM2-217ENST00000492883 CCT3P49368 545 aaKnown RBP12.87□□□□□ -0.35
CCM2-217ENST00000492883 MEOX1P50221 254 aa12.87□□□□□ -0.35
CCM2-217ENST00000492883 WNT3P56703 355 aa12.87□□□□□ -0.35
CCM2-217ENST00000492883 FBXW4P57775 412 aa12.87□□□□□ -0.35
CCM2-217ENST00000492883 STX1BP61266 288 aa12.87□□□□□ -0.35
CCM2-217ENST00000492883 RPP38P78345 283 aaKnown RBP12.87□□□□□ -0.35
CCM2-217ENST00000492883 NTRK2Q16620 822 aa12.87□□□□□ -0.35
CCM2-217ENST00000492883 SPANXN4Q5MJ08 99 aa12.87□□□□□ -0.35
CCM2-217ENST00000492883 WDR53Q7Z5U6 358 aaPredicted RBP12.87□□□□□ -0.35
CCM2-217ENST00000492883 MIER2Q8N344 545 aa12.87□□□□□ -0.35
CCM2-217ENST00000492883 CPSF7Q8N684 471 aaKnown RBP12.87□□□□□ -0.35
CCM2-217ENST00000492883 GLB1L3Q8NCI6 653 aaPredicted RBP12.87□□□□□ -0.35
CCM2-217ENST00000492883 OR10G3Q8NGC4 313 aa12.87□□□□□ -0.35
CCM2-217ENST00000492883 TMBIM1Q969X1 311 aa12.87□□□□□ -0.35
CCM2-217ENST00000492883 MIB2Q96AX9 1013 aa12.87□□□□□ -0.35
CCM2-217ENST00000492883 OMA1Q96E52 524 aa12.87□□□□□ -0.35
CCM2-217ENST00000492883 RILPQ96NA2 401 aa12.87□□□□□ -0.35
CCM2-217ENST00000492883 NEUROD4Q9HD90 331 aa12.87□□□□□ -0.35
CCM2-217ENST00000492883 NPHS2Q9NP85 383 aa12.87□□□□□ -0.35
CCM2-217ENST00000492883 SIRT3Q9NTG7 399 aaPredicted RBP12.87□□□□□ -0.35
CCM2-217ENST00000492883 ZCCHC3Q9NUD5 404 aaKnown RBP12.87□□□□□ -0.35
CCM2-217ENST00000492883 OLAHQ9NV23 265 aa12.87□□□□□ -0.35
CCM2-217ENST00000492883 CNIH4Q9P003 139 aa12.87□□□□□ -0.35
CCM2-217ENST00000492883 CACNA1GO43497 2377 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 TTC36A6NLP5 189 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 C9JVG2 144 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 PYCARD-AS1I3L0S3 204 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 TO15178 435 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 PPM1BO75688 479 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 PSMG1O95456 288 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 CPSF4O95639 269 aaKnown RBP12.86□□□□□ -0.35
CCM2-217ENST00000492883 TROVE2P10155 538 aaKnown RBP eCLIP12.86□□□□□ -0.35
CCM2-217ENST00000492883 IL12AP29459 219 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 GABRA3P34903 492 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 PRIM2P49643 509 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 DGKQP52824 942 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 HBA1P69905 142 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 PSPHP78330 225 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 PHC1P78364 1004 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 FOXK1P85037 733 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 PSG6Q00889 435 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 ALDH6A1Q02252 535 aaKnown RBP12.86□□□□□ -0.35
CCM2-217ENST00000492883 GAB1Q13480 694 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 VPS26BQ4G0F5 336 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 NPSR1Q6W5P4 371 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 NUP54Q7Z3B4 507 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 ANKRD46Q86W74 232 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 CLECL1Q8IZS7 167 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 SLC34A3Q8N130 599 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 CDRT4Q8N9R6 151 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 POGLUT1Q8NBL1 392 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 OR4N2Q8NGD1 307 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 OR56A1Q8NGH5 318 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 OR4A15Q8NGL6 344 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 RFWD2Q8NHY2 731 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 PSMA8Q8TAA3 256 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 GPR151Q8TDV0 419 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 PAQR8Q8TEZ7 354 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 SLC9A6Q92581 669 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 DIO2Q92813 273 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 FAM120BQ96EK7 910 aaKnown RBP12.86□□□□□ -0.35
CCM2-217ENST00000492883 CHMP6Q96FZ7 201 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 MS4A4EQ96PG1 132 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 OR52E6Q96RD3 313 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 FAM173AQ9BQD7 235 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 SIKE1Q9BRV8 207 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 LMF2Q9BU23 707 aaKnown RBP12.86□□□□□ -0.35
CCM2-217ENST00000492883 CXorf36Q9H7Y0 433 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 Q9N2J8 555 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 SDR39U1Q9NRG7 319 aaPredicted RBP12.86□□□□□ -0.35
CCM2-217ENST00000492883 ZIM2Q9NZV7 527 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 NTMQ9P121 344 aa12.86□□□□□ -0.35
CCM2-217ENST00000492883 NBEAQ8NFP9 2946 aa12.85□□□□□ -0.35
CCM2-217ENST00000492883 A0A0G2JND7 137 aa12.85□□□□□ -0.35
CCM2-217ENST00000492883 ASPDHA6ND91 283 aa12.85□□□□□ -0.35
CCM2-217ENST00000492883 PGRP06401 933 aa12.85□□□□□ -0.35
CCM2-217ENST00000492883 IL12BP29460 328 aa12.85□□□□□ -0.35
CCM2-217ENST00000492883 SOAT1P35610 550 aa12.85□□□□□ -0.35
CCM2-217ENST00000492883 PIGAP37287 484 aa12.85□□□□□ -0.35
CCM2-217ENST00000492883 DNASE1L1P49184 302 aa12.85□□□□□ -0.35
CCM2-217ENST00000492883 KCNJ2P63252 427 aa12.85□□□□□ -0.35
CCM2-217ENST00000492883 PLGLB1Q02325 96 aa12.85□□□□□ -0.35
CCM2-217ENST00000492883 TP53BP2Q13625 1128 aa12.85□□□□□ -0.35
CCM2-217ENST00000492883 DECR1Q16698 335 aa12.85□□□□□ -0.35
CCM2-217ENST00000492883 CYP27C1Q4G0S4 372 aa12.85□□□□□ -0.35
CCM2-217ENST00000492883 PRAMEF20Q5VT98 475 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms