RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 DCAF7P61962 342 aa16.45■□□□□ 0.22
HMGN1-219ENST00000491183 CRYZQ08257 329 aaKnown RBP16.45■□□□□ 0.22
HMGN1-219ENST00000491183 TRIM46Q7Z4K8 759 aa16.45■□□□□ 0.22
HMGN1-219ENST00000491183 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.45■□□□□ 0.22
HMGN1-219ENST00000491183 METTL7AQ9H8H3 244 aa16.45■□□□□ 0.22
HMGN1-219ENST00000491183 OXSMQ9NWU1 459 aa16.45■□□□□ 0.22
HMGN1-219ENST00000491183 EXO1Q9UQ84 846 aaKnown RBP16.45■□□□□ 0.22
HMGN1-219ENST00000491183 SLC6A5Q9Y345 797 aa16.45■□□□□ 0.22
HMGN1-219ENST00000491183 CSMD2Q7Z408 3487 aa16.44■□□□□ 0.22
HMGN1-219ENST00000491183 C15orf38-AP3S2A0A0A6YYH1 394 aa16.44■□□□□ 0.22
HMGN1-219ENST00000491183 FRG2CA6NGY1 282 aa16.44■□□□□ 0.22
HMGN1-219ENST00000491183 KDM4EB2RXH2 506 aaPredicted RBP16.44■□□□□ 0.22
HMGN1-219ENST00000491183 CT45A8P0DMV1 189 aa16.44■□□□□ 0.22
HMGN1-219ENST00000491183 CT45A9P0DMV2 189 aa16.44■□□□□ 0.22
HMGN1-219ENST00000491183 NAA20P61599 178 aa16.44■□□□□ 0.22
HMGN1-219ENST00000491183 TLE4Q04727 773 aa16.44■□□□□ 0.22
HMGN1-219ENST00000491183 SLC18A2Q05940 514 aa16.44■□□□□ 0.22
HMGN1-219ENST00000491183 C2orf80Q0P641 193 aa16.44■□□□□ 0.22
HMGN1-219ENST00000491183 PLCXD2Q0VAA5 305 aa16.44■□□□□ 0.22
HMGN1-219ENST00000491183 EIPR1Q53HC9 387 aa16.44■□□□□ 0.22
HMGN1-219ENST00000491183 CT45A2Q5DJT8 189 aa16.44■□□□□ 0.22
HMGN1-219ENST00000491183 RIPPLY2Q5TAB7 128 aa16.44■□□□□ 0.22
HMGN1-219ENST00000491183 VASNQ6EMK4 673 aa16.44■□□□□ 0.22
HMGN1-219ENST00000491183 ANGPTL8Q6UXH0 198 aa16.44■□□□□ 0.22
HMGN1-219ENST00000491183 DMRTC2Q8IXT2 367 aaPredicted RBP16.44■□□□□ 0.22
HMGN1-219ENST00000491183 SAMD14Q8IZD0 417 aaPredicted RBP16.44■□□□□ 0.22
HMGN1-219ENST00000491183 RDH11Q8TC12 318 aa16.44■□□□□ 0.22
HMGN1-219ENST00000491183 SHCBP1LQ9BZQ2 653 aa16.44■□□□□ 0.22
HMGN1-219ENST00000491183 PPCSQ9HAB8 311 aa16.44■□□□□ 0.22
HMGN1-219ENST00000491183 GALNT9Q9HCQ5 603 aa16.44■□□□□ 0.22
HMGN1-219ENST00000491183 CCL27Q9Y4X3 112 aa16.44■□□□□ 0.22
HMGN1-219ENST00000491183 AHRRA9YTQ3 701 aa16.43■□□□□ 0.22
HMGN1-219ENST00000491183 MYO1GB0I1T2 1018 aa16.43■□□□□ 0.22
HMGN1-219ENST00000491183 H3BQF6 201 aa16.43■□□□□ 0.22
HMGN1-219ENST00000491183 CDH16O75309 829 aa16.43■□□□□ 0.22
HMGN1-219ENST00000491183 BCAS2O75934 225 aaPredicted RBP16.43■□□□□ 0.22
HMGN1-219ENST00000491183 KRT4P19013 534 aa16.43■□□□□ 0.22
HMGN1-219ENST00000491183 DDCP20711 480 aa16.43■□□□□ 0.22
HMGN1-219ENST00000491183 MPIP34949 423 aa16.43■□□□□ 0.22
HMGN1-219ENST00000491183 GSTM5P46439 218 aa16.43■□□□□ 0.22
HMGN1-219ENST00000491183 CORO7P57737 925 aa16.43■□□□□ 0.22
HMGN1-219ENST00000491183 ZNF763Q0D2J5 394 aa16.43■□□□□ 0.22
HMGN1-219ENST00000491183 CFAP157Q5JU67 520 aa16.43■□□□□ 0.22
HMGN1-219ENST00000491183 WIPI1Q5MNZ9 446 aaPredicted RBP16.43■□□□□ 0.22
HMGN1-219ENST00000491183 FAM71E1Q6IPT2 247 aa16.43■□□□□ 0.22
HMGN1-219ENST00000491183 SLC30A6Q6NXT4 461 aa16.43■□□□□ 0.22
HMGN1-219ENST00000491183 NPSR1Q6W5P4 371 aa16.43■□□□□ 0.22
HMGN1-219ENST00000491183 C4orf33Q8N1A6 199 aa16.43■□□□□ 0.22
HMGN1-219ENST00000491183 OR7G2Q8NG99 324 aa16.43■□□□□ 0.22
HMGN1-219ENST00000491183 OR1J4Q8NGS1 313 aa16.43■□□□□ 0.22
HMGN1-219ENST00000491183 TMBIM1Q969X1 311 aa16.43■□□□□ 0.22
HMGN1-219ENST00000491183 ERP27Q96DN0 273 aa16.43■□□□□ 0.22
HMGN1-219ENST00000491183 VSTM2LQ96N03 204 aa16.43■□□□□ 0.22
HMGN1-219ENST00000491183 BTBD9Q96Q07 612 aa16.43■□□□□ 0.22
HMGN1-219ENST00000491183 OSBPL11Q9BXB4 747 aa16.43■□□□□ 0.22
HMGN1-219ENST00000491183 ANKZF1Q9H8Y5 726 aa16.43■□□□□ 0.22
HMGN1-219ENST00000491183 KIAA1549Q9HCM3 1950 aa16.42■□□□□ 0.22
HMGN1-219ENST00000491183 OR6C70A6NIJ9 312 aa16.42■□□□□ 0.22
HMGN1-219ENST00000491183 COPEO14579 308 aa16.42■□□□□ 0.22
HMGN1-219ENST00000491183 SNPHO15079 494 aa16.42■□□□□ 0.22
HMGN1-219ENST00000491183 PLOD3O60568 738 aa16.42■□□□□ 0.22
HMGN1-219ENST00000491183 TSPAN2O60636 221 aa16.42■□□□□ 0.22
HMGN1-219ENST00000491183 REM1O75628 298 aa16.42■□□□□ 0.22
HMGN1-219ENST00000491183 EPPINO95925 133 aa16.42■□□□□ 0.22
HMGN1-219ENST00000491183 BMP7P18075 431 aa16.42■□□□□ 0.22
HMGN1-219ENST00000491183 ELAVL4P26378 380 aaKnown RBP16.42■□□□□ 0.22
HMGN1-219ENST00000491183 DLX5P56178 289 aa16.42■□□□□ 0.22
HMGN1-219ENST00000491183 WNT3P56703 355 aa16.42■□□□□ 0.22
HMGN1-219ENST00000491183 SNTA1Q13424 505 aa16.42■□□□□ 0.22
HMGN1-219ENST00000491183 KIAA0040Q15053 153 aa16.42■□□□□ 0.22
HMGN1-219ENST00000491183 TOMM20Q15388 145 aa16.42■□□□□ 0.22
HMGN1-219ENST00000491183 IMPG1Q17R60 797 aa16.42■□□□□ 0.22
HMGN1-219ENST00000491183 NHSL2Q5HYW2 709 aa16.42■□□□□ 0.22
HMGN1-219ENST00000491183 YRDCQ86U90 279 aaKnown RBP16.42■□□□□ 0.22
HMGN1-219ENST00000491183 C10orf107Q8IVU9 208 aa16.42■□□□□ 0.22
HMGN1-219ENST00000491183 FAM9CQ8IZT9 166 aa16.42■□□□□ 0.22
HMGN1-219ENST00000491183 WDSUB1Q8N9V3 476 aa16.42■□□□□ 0.22
HMGN1-219ENST00000491183 CCDC63Q8NA47 563 aa16.42■□□□□ 0.22
HMGN1-219ENST00000491183 FAM83FQ8NEG4 500 aaPredicted RBP16.42■□□□□ 0.22
HMGN1-219ENST00000491183 OR2W6PQ8NHA6 318 aa16.42■□□□□ 0.22
HMGN1-219ENST00000491183 CDC26Q8NHZ8 85 aa16.42■□□□□ 0.22
HMGN1-219ENST00000491183 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.42■□□□□ 0.22
HMGN1-219ENST00000491183 BBS4Q96RK4 519 aa16.42■□□□□ 0.22
HMGN1-219ENST00000491183 UGT2B28Q9BY64 529 aa16.42■□□□□ 0.22
HMGN1-219ENST00000491183 PRDM14Q9GZV8 571 aa16.42■□□□□ 0.22
HMGN1-219ENST00000491183 FOLH1BQ9HBA9 442 aa16.42■□□□□ 0.22
HMGN1-219ENST00000491183 MCCC2Q9HCC0 563 aa16.42■□□□□ 0.22
HMGN1-219ENST00000491183 GIMAP4Q9NUV9 329 aa16.42■□□□□ 0.22
HMGN1-219ENST00000491183 TAS2R7Q9NYW3 318 aa16.42■□□□□ 0.22
HMGN1-219ENST00000491183 POLR3HQ9Y535 204 aaPredicted RBP16.42■□□□□ 0.22
HMGN1-219ENST00000491183 MED12Q93074 2177 aa16.41■□□□□ 0.22
HMGN1-219ENST00000491183 PRAMEF25A6NGN4 478 aa16.41■□□□□ 0.22
HMGN1-219ENST00000491183 ERN1O75460 977 aaKnown RBP16.41■□□□□ 0.22
HMGN1-219ENST00000491183 RSL1D1O76021 490 aaKnown RBP16.41■□□□□ 0.22
HMGN1-219ENST00000491183 UROSP10746 265 aa16.41■□□□□ 0.22
HMGN1-219ENST00000491183 CEACAM8P31997 349 aaPredicted RBP16.41■□□□□ 0.22
HMGN1-219ENST00000491183 PCLAFQ15004 111 aa16.41■□□□□ 0.22
HMGN1-219ENST00000491183 ACSF3Q4G176 576 aaPredicted RBP16.41■□□□□ 0.22
HMGN1-219ENST00000491183 DCST1Q5T197 706 aa16.41■□□□□ 0.22
HMGN1-219ENST00000491183 LIPMQ5VYY2 423 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms