RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 ATP6AP2A0A1C7CYW4 349 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 A1L4Q6 167 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 FRG2CA6NGY1 282 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 ATP6AP2O75787 350 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 ZWINTO95229 277 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 IFI6P09912 130 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 PTGDSP41222 190 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 CASP3P42574 277 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 NCBP2P52298 156 aaKnown RBP eCLIP13.03□□□□□ -0.32
COL9A2-208ENST00000488463 CORO7P57737 925 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 DCAF7P61962 342 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 CHI3L2Q15782 390 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 GALNTL6Q49A17 601 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 C6orf136Q5SQH8 315 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 ANKRD26P1Q6NSI1 321 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 SLC22A16Q86VW1 577 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 DDIASQ8IXT1 998 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 OR2L13Q8N349 312 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 FAM109AQ8N4B1 249 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 ZNF781Q8N8C0 355 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 CLHC1Q8NHS4 586 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 RNF138Q8WVD3 245 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 ITLN2Q8WWU7 325 aaPredicted RBP13.03□□□□□ -0.32
COL9A2-208ENST00000488463 GFM2Q969S9 779 aaKnown RBP13.03□□□□□ -0.32
COL9A2-208ENST00000488463 MAGED4Q96JG8 741 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 TSSK3Q96PN8 268 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 PHF12Q96QT6 1004 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 DMRTA2Q96SC8 542 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 ANGPTL4Q9BY76 406 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 CENPHQ9H3R5 247 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 REEP4Q9H6H4 257 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 ZNF703Q9H7S9 590 aaPredicted RBP13.03□□□□□ -0.32
COL9A2-208ENST00000488463 FOLH1BQ9HBA9 442 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 ZFP64Q9NPA5 681 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 MIEF1Q9NQG6 463 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 PFDN4Q9NQP4 134 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 GIMAP4Q9NUV9 329 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 PRODH2Q9UF12 536 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 C19orf53Q9UNZ5 99 aaPredicted RBP13.03□□□□□ -0.32
COL9A2-208ENST00000488463 PHF3Q92576 2039 aaKnown RBP13.03□□□□□ -0.32
COL9A2-208ENST00000488463 CAPN14A8MX76 684 aa13.02□□□□□ -0.33
COL9A2-208ENST00000488463 TMEM114B3SHH9 223 aa13.02□□□□□ -0.33
COL9A2-208ENST00000488463 UPK1AO00322 258 aa13.02□□□□□ -0.33
COL9A2-208ENST00000488463 CCL21O00585 134 aa13.02□□□□□ -0.33
COL9A2-208ENST00000488463 TSPAN2O60636 221 aa13.02□□□□□ -0.33
COL9A2-208ENST00000488463 UGT2B11O75310 529 aa13.02□□□□□ -0.33
COL9A2-208ENST00000488463 BCAS2O75934 225 aaPredicted RBP13.02□□□□□ -0.33
COL9A2-208ENST00000488463 PDE9AO76083 593 aa13.02□□□□□ -0.33
COL9A2-208ENST00000488463 SLITRK5O94991 958 aa13.02□□□□□ -0.33
COL9A2-208ENST00000488463 BGNP21810 368 aa13.02□□□□□ -0.33
COL9A2-208ENST00000488463 PTGS2P35354 604 aa13.02□□□□□ -0.33
COL9A2-208ENST00000488463 MC3RP41968 323 aa13.02□□□□□ -0.33
COL9A2-208ENST00000488463 NRG3P56975 720 aa13.02□□□□□ -0.33
COL9A2-208ENST00000488463 ABCE1P61221 599 aaKnown RBP13.02□□□□□ -0.33
COL9A2-208ENST00000488463 PLGLB1Q02325 96 aa13.02□□□□□ -0.33
COL9A2-208ENST00000488463 TMEM107Q6UX40 140 aa13.02□□□□□ -0.33
COL9A2-208ENST00000488463 NCCRP1Q6ZVX7 275 aaPredicted RBP13.02□□□□□ -0.33
COL9A2-208ENST00000488463 TRILQ7L0X0 811 aa13.02□□□□□ -0.33
COL9A2-208ENST00000488463 MAMDC2Q7Z304 686 aaPredicted RBP13.02□□□□□ -0.33
COL9A2-208ENST00000488463 ZNF551Q7Z340 670 aaPredicted RBP13.02□□□□□ -0.33
COL9A2-208ENST00000488463 FAM57AQ8TBR7 257 aa13.02□□□□□ -0.33
COL9A2-208ENST00000488463 NUDT8Q8WV74 236 aa13.02□□□□□ -0.33
COL9A2-208ENST00000488463 DIO2Q92813 273 aa13.02□□□□□ -0.33
COL9A2-208ENST00000488463 CIDECQ96AQ7 238 aaPredicted RBP13.02□□□□□ -0.33
COL9A2-208ENST00000488463 OMA1Q96E52 524 aa13.02□□□□□ -0.33
COL9A2-208ENST00000488463 ELP4Q96EB1 424 aa13.02□□□□□ -0.33
COL9A2-208ENST00000488463 PPP3R2Q96LZ3 170 aa13.02□□□□□ -0.33
COL9A2-208ENST00000488463 RILPQ96NA2 401 aa13.02□□□□□ -0.33
COL9A2-208ENST00000488463 NODALQ96S42 347 aa13.02□□□□□ -0.33
COL9A2-208ENST00000488463 STMN4Q9H169 189 aaPredicted RBP13.02□□□□□ -0.33
COL9A2-208ENST00000488463 UBQLN3Q9H347 655 aa13.02□□□□□ -0.33
COL9A2-208ENST00000488463 TMBIM4Q9HC24 238 aa13.02□□□□□ -0.33
COL9A2-208ENST00000488463 NTMQ9P121 344 aa13.02□□□□□ -0.33
COL9A2-208ENST00000488463 SH3BGRL2Q9UJC5 107 aa13.02□□□□□ -0.33
COL9A2-208ENST00000488463 MEMO1Q9Y316 297 aa13.02□□□□□ -0.33
COL9A2-208ENST00000488463 ACOT7O00154 380 aa13.01□□□□□ -0.33
COL9A2-208ENST00000488463 TP53I11O14683 189 aa13.01□□□□□ -0.33
COL9A2-208ENST00000488463 AKAP10O43572 662 aa13.01□□□□□ -0.33
COL9A2-208ENST00000488463 CDC40O60508 579 aaKnown RBP eCLIP13.01□□□□□ -0.33
COL9A2-208ENST00000488463 PEX11AO75192 247 aa13.01□□□□□ -0.33
COL9A2-208ENST00000488463 ERN1O75460 977 aaKnown RBP13.01□□□□□ -0.33
COL9A2-208ENST00000488463 SKAP2O75563 359 aaPredicted RBP13.01□□□□□ -0.33
COL9A2-208ENST00000488463 MYZAPP0CAP1 466 aa13.01□□□□□ -0.33
COL9A2-208ENST00000488463 H2AFXP16104 143 aaPredicted RBP13.01□□□□□ -0.33
COL9A2-208ENST00000488463 ABOP16442 354 aa13.01□□□□□ -0.33
COL9A2-208ENST00000488463 ENDOUP21128 410 aaKnown RBP13.01□□□□□ -0.33
COL9A2-208ENST00000488463 MAP3K8P41279 467 aa13.01□□□□□ -0.33
COL9A2-208ENST00000488463 TMED10P49755 219 aaKnown RBP13.01□□□□□ -0.33
COL9A2-208ENST00000488463 SLC18A1P54219 525 aa13.01□□□□□ -0.33
COL9A2-208ENST00000488463 PER3P56645 1201 aa13.01□□□□□ -0.33
COL9A2-208ENST00000488463 KCNJ2P63252 427 aa13.01□□□□□ -0.33
COL9A2-208ENST00000488463 PSG6Q00889 435 aa13.01□□□□□ -0.33
COL9A2-208ENST00000488463 PTGR1Q14914 329 aa13.01□□□□□ -0.33
COL9A2-208ENST00000488463 TBCELQ5QJ74 424 aa13.01□□□□□ -0.33
COL9A2-208ENST00000488463 ARHGAP11AQ6P4F7 1023 aa13.01□□□□□ -0.33
COL9A2-208ENST00000488463 NUP54Q7Z3B4 507 aa13.01□□□□□ -0.33
COL9A2-208ENST00000488463 RIMKLAQ8IXN7 391 aa13.01□□□□□ -0.33
COL9A2-208ENST00000488463 SLC34A3Q8N130 599 aa13.01□□□□□ -0.33
COL9A2-208ENST00000488463 GOLGA6L1Q8N7Z2 621 aa13.01□□□□□ -0.33
COL9A2-208ENST00000488463 OR4N2Q8NGD1 307 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms