RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 GALNT12Q8IXK2 581 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 ZZZ3Q8IYH5 903 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 PRSS58Q8IYP2 241 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 VWA5B2Q8N398 1253 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 MARVELD2Q8N4S9 558 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 C7orf57Q8NEG2 295 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 NUP43Q8NFH3 380 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 OR56A1Q8NGH5 318 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 PTPMT1Q8WUK0 201 aaPredicted RBP10.55□□□□□ -0.72
SND1-212ENST00000485871 MOAP1Q96BY2 351 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 NSMCE2Q96MF7 247 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 SLC46A1Q96NT5 459 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 DGAT2Q96PD7 388 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 MESP1Q9BRJ9 268 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 C9orf16Q9BUW7 83 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 THUMPD3Q9BV44 507 aaKnown RBP10.55□□□□□ -0.72
SND1-212ENST00000485871 OSBPL11Q9BXB4 747 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 ADAP2Q9NPF8 381 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 ANAPC2Q9UJX6 822 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 NXT1Q9UKK6 140 aaKnown RBP10.55□□□□□ -0.72
SND1-212ENST00000485871 NBEAQ8NFP9 2946 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 AKAP13Q12802 2813 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 EXPH5Q8NEV8 1989 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 LOC102723996A0A087X1L8 192 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 SYNDIG1LA6NDD5 238 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 EVPLLA8MZ36 301 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 OR10H2O60403 315 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 ALOX12BO75342 701 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 DXOO77932 396 aaKnown RBP10.54□□□□□ -0.72
SND1-212ENST00000485871 DDAH2O95865 285 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 IGKV3-11P04433 115 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 HMGN2P05204 90 aaKnown RBP10.54□□□□□ -0.72
SND1-212ENST00000485871 UMODP07911 640 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 RAB40ALP0C0E4 278 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 ARAFP10398 606 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 ETFAP13804 333 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 SLC5A2P31639 672 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 CHI3L1P36222 383 aaPredicted RBP10.54□□□□□ -0.72
SND1-212ENST00000485871 MAGEA8P43361 318 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 EMP2P54851 167 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 POLE2P56282 527 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 RPS26P62854 115 aaKnown RBP10.54□□□□□ -0.72
SND1-212ENST00000485871 PRR5P85299 388 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 TP53BP2Q13625 1128 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 ELAVL1Q15717 326 aaKnown RBP10.54□□□□□ -0.72
SND1-212ENST00000485871 MAPK11Q15759 364 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 LRRC36Q1X8D7 754 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 TMEM164Q5U3C3 297 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 MLIPQ5VWP3 458 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 MFSD12Q6NUT3 480 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 CYP2R1Q6VVX0 501 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 ANKRD37Q7Z713 158 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 MICU2Q8IYU8 434 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 ADGRG5Q8IZF4 528 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 LGI4Q8N135 537 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 LILRA2Q8N149 483 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 HORMAD2Q8N7B1 307 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 CT55Q8WUE5 264 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 CANT1Q8WVQ1 401 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 RIT1Q92963 219 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 CENPNQ96H22 339 aaPredicted RBP10.54□□□□□ -0.72
SND1-212ENST00000485871 REXO5Q96IC2 774 aaKnown RBP10.54□□□□□ -0.72
SND1-212ENST00000485871 SLC35G5Q96KT7 338 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 MS4A4EQ96PG1 132 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 WDR77Q9BQA1 342 aaPredicted RBP10.54□□□□□ -0.72
SND1-212ENST00000485871 SPATA9Q9BWV2 254 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 UGT2B28Q9BY64 529 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 RAD21L1Q9H4I0 556 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 GORASP2Q9H8Y8 452 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 C3orf14Q9HBI5 128 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 DDX18Q9NVP1 670 aaKnown RBP10.54□□□□□ -0.72
SND1-212ENST00000485871 C3orf18Q9UK00 162 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 PADI1Q9ULC6 663 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 PPIEQ9UNP9 301 aaKnown RBP10.54□□□□□ -0.72
SND1-212ENST00000485871 CORO2BQ9UQ03 480 aa10.54□□□□□ -0.72
SND1-212ENST00000485871 A0A1W2PQ72 361 aa10.53□□□□□ -0.72
SND1-212ENST00000485871 TCRBV5S2A0A599 114 aa10.53□□□□□ -0.72
SND1-212ENST00000485871 ELOVL7A1L3X0 281 aa10.53□□□□□ -0.72
SND1-212ENST00000485871 PRAMEF27A3QJZ7 478 aa10.53□□□□□ -0.72
SND1-212ENST00000485871 A6NHS1 94 aa10.53□□□□□ -0.72
SND1-212ENST00000485871 C9J4A7 227 aa10.53□□□□□ -0.72
SND1-212ENST00000485871 HMGN4O00479 90 aa10.53□□□□□ -0.72
SND1-212ENST00000485871 GSTA4O15217 222 aa10.53□□□□□ -0.72
SND1-212ENST00000485871 RAD1O60671 282 aa10.53□□□□□ -0.72
SND1-212ENST00000485871 NME6O75414 186 aaPredicted RBP10.53□□□□□ -0.72
SND1-212ENST00000485871 SMNDC1O75940 238 aaKnown RBP eCLIP10.53□□□□□ -0.72
SND1-212ENST00000485871 LYNP07948 512 aa10.53□□□□□ -0.72
SND1-212ENST00000485871 ACP2P11117 423 aa10.53□□□□□ -0.72
SND1-212ENST00000485871 GGT1P19440 569 aa10.53□□□□□ -0.72
SND1-212ENST00000485871 SSTR4P31391 388 aa10.53□□□□□ -0.72
SND1-212ENST00000485871 STAT5AP42229 794 aa10.53□□□□□ -0.72
SND1-212ENST00000485871 EMDP50402 254 aa10.53□□□□□ -0.72
SND1-212ENST00000485871 GPR143P51810 404 aa10.53□□□□□ -0.72
SND1-212ENST00000485871 CASP9P55211 416 aa10.53□□□□□ -0.72
SND1-212ENST00000485871 FUT5Q11128 374 aa10.53□□□□□ -0.72
SND1-212ENST00000485871 LASP1Q14847 261 aaKnown RBP10.53□□□□□ -0.72
SND1-212ENST00000485871 RTP5Q14D33 572 aa10.53□□□□□ -0.72
SND1-212ENST00000485871 EXOSC7Q15024 291 aaKnown RBP10.53□□□□□ -0.72
SND1-212ENST00000485871 NSDHLQ15738 373 aa10.53□□□□□ -0.72
SND1-212ENST00000485871 CYP51A1Q16850 503 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms