RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 ECHS1P30084 290 aa11.83□□□□□ -0.52
HDAC6-227ENST00000485102 DIO3P55073 304 aa11.83□□□□□ -0.52
HDAC6-227ENST00000485102 GTF2H2Q13888 395 aa11.83□□□□□ -0.52
HDAC6-227ENST00000485102 TRADDQ15628 312 aa11.83□□□□□ -0.52
HDAC6-227ENST00000485102 PFKFB4Q16877 469 aa11.83□□□□□ -0.52
HDAC6-227ENST00000485102 FAM83EQ2M2I3 478 aa11.83□□□□□ -0.52
HDAC6-227ENST00000485102 PRICKLE4Q2TBC4 344 aa11.83□□□□□ -0.52
HDAC6-227ENST00000485102 KBTBD12Q3ZCT8 623 aa11.83□□□□□ -0.52
HDAC6-227ENST00000485102 GTF2H2CQ6P1K8 395 aa11.83□□□□□ -0.52
HDAC6-227ENST00000485102 ANGPTL8Q6UXH0 198 aa11.83□□□□□ -0.52
HDAC6-227ENST00000485102 YRDCQ86U90 279 aaKnown RBP11.83□□□□□ -0.52
HDAC6-227ENST00000485102 MYLK4Q86YV6 388 aaPredicted RBP11.83□□□□□ -0.52
HDAC6-227ENST00000485102 TRIM42Q8IWZ5 723 aa11.83□□□□□ -0.52
HDAC6-227ENST00000485102 CTAGE3PQ8IX95 158 aa11.83□□□□□ -0.52
HDAC6-227ENST00000485102 WDSUB1Q8N9V3 476 aa11.83□□□□□ -0.52
HDAC6-227ENST00000485102 SLC44A1Q8WWI5 657 aa11.83□□□□□ -0.52
HDAC6-227ENST00000485102 MTBPQ96DY7 904 aa11.83□□□□□ -0.52
HDAC6-227ENST00000485102 DTNBP1Q96EV8 351 aa11.83□□□□□ -0.52
HDAC6-227ENST00000485102 LCORQ96JN0 433 aaPredicted RBP11.83□□□□□ -0.52
HDAC6-227ENST00000485102 NTMT1Q9BV86 223 aa11.83□□□□□ -0.52
HDAC6-227ENST00000485102 PARD6BQ9BYG5 372 aa11.83□□□□□ -0.52
HDAC6-227ENST00000485102 ACSS3Q9H6R3 686 aa11.83□□□□□ -0.52
HDAC6-227ENST00000485102 METTL7AQ9H8H3 244 aa11.83□□□□□ -0.52
HDAC6-227ENST00000485102 AHSPQ9NZD4 102 aa11.83□□□□□ -0.52
HDAC6-227ENST00000485102 PACSIN3Q9UKS6 424 aa11.83□□□□□ -0.52
HDAC6-227ENST00000485102 DLGAP4Q9Y2H0 992 aa11.83□□□□□ -0.52
HDAC6-227ENST00000485102 RNF11Q9Y3C5 154 aa11.83□□□□□ -0.52
HDAC6-227ENST00000485102 TESMINQ9Y4I5 508 aa11.83□□□□□ -0.52
HDAC6-227ENST00000485102 COL6A5A8TX70 2615 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 FBN3Q75N90 2809 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 A0A087X1B8 175 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 C1orf226A1L170 272 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 GUCY1B2O75343 617 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 TNFSF13O75888 250 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 CLDN9O95484 217 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 LY6G6DO95868 133 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 C2P06681 752 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 GFAPP14136 432 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 NT5EP21589 574 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 DRD5P21918 477 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 PPICP45877 212 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 NEK2P51955 445 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 BCL2A1Q16548 175 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 C6orf163Q5TEZ5 329 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 FRG2Q64ET8 278 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 Q71RC1 249 aaPredicted RBP11.82□□□□□ -0.52
HDAC6-227ENST00000485102 PAGE2Q7Z2X7 111 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 GOLGA7Q7Z5G4 137 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 LUZP2Q86TE4 346 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 PRR22Q8IZ63 422 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 VWA5B2Q8N398 1253 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 PPM1NQ8N819 430 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 FBF1Q8TES7 1133 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 INTS12Q96CB8 462 aaKnown RBP11.82□□□□□ -0.52
HDAC6-227ENST00000485102 GPR78Q96P69 363 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 FRG2BQ96QU4 278 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 NODALQ96S42 347 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 OSBPL11Q9BXB4 747 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 NINJ2Q9NZG7 142 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 MAT2BQ9NZL9 334 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 ZNF180Q9UJW8 692 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 EIF3LQ9Y262 564 aaKnown RBP11.82□□□□□ -0.52
HDAC6-227ENST00000485102 DTX4Q9Y2E6 619 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 PCDHA9Q9Y5H5 950 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 ATRQ13535 2644 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 ZANQ9Y493 2812 aa11.82□□□□□ -0.52
HDAC6-227ENST00000485102 EXOC1LA0A1B0GW35 172 aa11.81□□□□□ -0.52
HDAC6-227ENST00000485102 GOLGA6L10A6NI86 522 aa11.81□□□□□ -0.52
HDAC6-227ENST00000485102 OR6C70A6NIJ9 312 aa11.81□□□□□ -0.52
HDAC6-227ENST00000485102 CTIFO43310 598 aaKnown RBP11.81□□□□□ -0.52
HDAC6-227ENST00000485102 RIPK2O43353 540 aa11.81□□□□□ -0.52
HDAC6-227ENST00000485102 HCRTR2O43614 444 aa11.81□□□□□ -0.52
HDAC6-227ENST00000485102 ABCB7O75027 752 aa11.81□□□□□ -0.52
HDAC6-227ENST00000485102 UGT2B11O75310 529 aa11.81□□□□□ -0.52
HDAC6-227ENST00000485102 GBAP04062 536 aa11.81□□□□□ -0.52
HDAC6-227ENST00000485102 ZNF708P17019 499 aa11.81□□□□□ -0.52
HDAC6-227ENST00000485102 SRD5A2P31213 254 aa11.81□□□□□ -0.52
HDAC6-227ENST00000485102 MC3RP41968 323 aa11.81□□□□□ -0.52
HDAC6-227ENST00000485102 CPA2P48052 419 aa11.81□□□□□ -0.52
HDAC6-227ENST00000485102 LHX2P50458 406 aa11.81□□□□□ -0.52
HDAC6-227ENST00000485102 VSNL1P62760 191 aa11.81□□□□□ -0.52
HDAC6-227ENST00000485102 RASA2Q15283 850 aa11.81□□□□□ -0.52
HDAC6-227ENST00000485102 SLC48A1Q6P1K1 146 aa11.81□□□□□ -0.52
HDAC6-227ENST00000485102 AAGABQ6PD74 315 aa11.81□□□□□ -0.52
HDAC6-227ENST00000485102 IFNEQ86WN2 208 aa11.81□□□□□ -0.52
HDAC6-227ENST00000485102 PLCZ1Q86YW0 608 aa11.81□□□□□ -0.52
HDAC6-227ENST00000485102 METTL4Q8N3J2 472 aa11.81□□□□□ -0.52
HDAC6-227ENST00000485102 RIBC1Q8N443 379 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-227ENST00000485102 MREGQ8N565 214 aa11.81□□□□□ -0.52
HDAC6-227ENST00000485102 GBP7Q8N8V2 638 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-227ENST00000485102 RNF138Q8WVD3 245 aa11.81□□□□□ -0.52
HDAC6-227ENST00000485102 KCTD4Q8WVF5 259 aa11.81□□□□□ -0.52
HDAC6-227ENST00000485102 UBLCP1Q8WVY7 318 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-227ENST00000485102 OMA1Q96E52 524 aa11.81□□□□□ -0.52
HDAC6-227ENST00000485102 ZNF395Q9H8N7 513 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-227ENST00000485102 SERHLQ9NQF3 203 aa11.81□□□□□ -0.52
HDAC6-227ENST00000485102 PRODH2Q9UF12 536 aa11.81□□□□□ -0.52
HDAC6-227ENST00000485102 PSME2Q9UL46 239 aa11.81□□□□□ -0.52
HDAC6-227ENST00000485102 HMX2A2RU54 273 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms