RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 WISP1O95388 367 aa14.38□□□□□ -0.11
RPP40-206ENST00000483546 ALDOCP09972 364 aaKnown RBP14.38□□□□□ -0.11
RPP40-206ENST00000483546 CT45A8P0DMV1 189 aa14.38□□□□□ -0.11
RPP40-206ENST00000483546 CT45A9P0DMV2 189 aa14.38□□□□□ -0.11
RPP40-206ENST00000483546 CNR1P21554 472 aa14.38□□□□□ -0.11
RPP40-206ENST00000483546 KIR3DL1P43629 444 aa14.38□□□□□ -0.11
RPP40-206ENST00000483546 ST13P50502 369 aaKnown RBP14.38□□□□□ -0.11
RPP40-206ENST00000483546 MRPS22P82650 360 aaKnown RBP14.38□□□□□ -0.11
RPP40-206ENST00000483546 LRRC74AQ0VAA2 488 aa14.38□□□□□ -0.11
RPP40-206ENST00000483546 ZNF155Q12901 538 aaPredicted RBP14.38□□□□□ -0.11
RPP40-206ENST00000483546 VPS26BQ4G0F5 336 aa14.38□□□□□ -0.11
RPP40-206ENST00000483546 SLC9B1Q4ZJI4 515 aa14.38□□□□□ -0.11
RPP40-206ENST00000483546 CT45A2Q5DJT8 189 aa14.38□□□□□ -0.11
RPP40-206ENST00000483546 ANXA8L1Q5VT79 327 aa14.38□□□□□ -0.11
RPP40-206ENST00000483546 NXNQ6DKJ4 435 aa14.38□□□□□ -0.11
RPP40-206ENST00000483546 TMEM81Q6P7N7 255 aa14.38□□□□□ -0.11
RPP40-206ENST00000483546 ZCCHC12Q6PEW1 402 aa14.38□□□□□ -0.11
RPP40-206ENST00000483546 TMEM64Q6YI46 380 aa14.38□□□□□ -0.11
RPP40-206ENST00000483546 BNC2Q6ZN30 1099 aaPredicted RBP14.38□□□□□ -0.11
RPP40-206ENST00000483546 NUP54Q7Z3B4 507 aa14.38□□□□□ -0.11
RPP40-206ENST00000483546 MAVSQ7Z434 540 aa14.38□□□□□ -0.11
RPP40-206ENST00000483546 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.38□□□□□ -0.11
RPP40-206ENST00000483546 SULF2Q8IWU5 870 aa14.38□□□□□ -0.11
RPP40-206ENST00000483546 FBXW8Q8N3Y1 598 aa14.38□□□□□ -0.11
RPP40-206ENST00000483546 ZFP62Q8NB50 900 aaPredicted RBP14.38□□□□□ -0.11
RPP40-206ENST00000483546 GLB1L3Q8NCI6 653 aaPredicted RBP14.38□□□□□ -0.11
RPP40-206ENST00000483546 ST6GALNAC3Q8NDV1 305 aa14.38□□□□□ -0.11
RPP40-206ENST00000483546 SIMC1Q8NDZ2 872 aa14.38□□□□□ -0.11
RPP40-206ENST00000483546 FAM13CQ8NE31 585 aa14.38□□□□□ -0.11
RPP40-206ENST00000483546 MS4A4EQ96PG1 132 aa14.38□□□□□ -0.11
RPP40-206ENST00000483546 FAM173AQ9BQD7 235 aa14.38□□□□□ -0.11
RPP40-206ENST00000483546 LMF2Q9BU23 707 aaKnown RBP14.38□□□□□ -0.11
RPP40-206ENST00000483546 CCDC28BQ9BUN5 200 aa14.38□□□□□ -0.11
RPP40-206ENST00000483546 CLMPQ9H6B4 373 aa14.38□□□□□ -0.11
RPP40-206ENST00000483546 GPR45Q9Y5Y3 372 aa14.38□□□□□ -0.11
RPP40-206ENST00000483546 NUP214P35658 2090 aaPredicted RBP14.38□□□□□ -0.11
RPP40-206ENST00000483546 PRRC2CQ9Y520 2896 aaKnown RBP14.38□□□□□ -0.11
RPP40-206ENST00000483546 SVILO95425 2214 aa14.38□□□□□ -0.11
RPP40-206ENST00000483546 FASNP49327 2511 aaKnown RBP14.37□□□□□ -0.11
RPP40-206ENST00000483546 OR6C70A6NIJ9 312 aa14.37□□□□□ -0.11
RPP40-206ENST00000483546 E9PBE3 544 aa14.37□□□□□ -0.11
RPP40-206ENST00000483546 ZNF24P17028 368 aa14.37□□□□□ -0.11
RPP40-206ENST00000483546 KRT20P35900 424 aa14.37□□□□□ -0.11
RPP40-206ENST00000483546 MEOX1P50221 254 aa14.37□□□□□ -0.11
RPP40-206ENST00000483546 PSG6Q00889 435 aa14.37□□□□□ -0.11
RPP40-206ENST00000483546 ALDH6A1Q02252 535 aaKnown RBP14.37□□□□□ -0.11
RPP40-206ENST00000483546 PLCXD2Q0VAA5 305 aa14.37□□□□□ -0.11
RPP40-206ENST00000483546 ELOAQ14241 798 aaKnown RBP14.37□□□□□ -0.11
RPP40-206ENST00000483546 ESPL1Q14674 2120 aa14.37□□□□□ -0.11
RPP40-206ENST00000483546 CYP27C1Q4G0S4 372 aa14.37□□□□□ -0.11
RPP40-206ENST00000483546 PDCD4Q53EL6 469 aaKnown RBP14.37□□□□□ -0.11
RPP40-206ENST00000483546 KRTCAP3Q53RY4 240 aa14.37□□□□□ -0.11
RPP40-206ENST00000483546 BHLHB9Q6PI77 547 aa14.37□□□□□ -0.11
RPP40-206ENST00000483546 CDRT4Q8N9R6 151 aa14.37□□□□□ -0.11
RPP40-206ENST00000483546 SFXN5Q8TD22 340 aa14.37□□□□□ -0.11
RPP40-206ENST00000483546 HOXB13Q92826 284 aaPredicted RBP14.37□□□□□ -0.11
RPP40-206ENST00000483546 OMA1Q96E52 524 aa14.37□□□□□ -0.11
RPP40-206ENST00000483546 SLC35A4Q96G79 324 aa14.37□□□□□ -0.11
RPP40-206ENST00000483546 ZBTB18Q99592 522 aa14.37□□□□□ -0.11
RPP40-206ENST00000483546 ANKRA2Q9H9E1 313 aa14.37□□□□□ -0.11
RPP40-206ENST00000483546 Q9N2J8 555 aa14.37□□□□□ -0.11
RPP40-206ENST00000483546 TCF7L2Q9NQB0 619 aa14.37□□□□□ -0.11
RPP40-206ENST00000483546 FAM120CQ9NX05 1096 aaKnown RBP14.37□□□□□ -0.11
RPP40-206ENST00000483546 MRTO4Q9UKD2 239 aaKnown RBP14.37□□□□□ -0.11
RPP40-206ENST00000483546 PCDHGB4Q9UN71 923 aa14.37□□□□□ -0.11
RPP40-206ENST00000483546 CHCHD2Q9Y6H1 151 aaPredicted RBP14.37□□□□□ -0.11
RPP40-206ENST00000483546 ACOT7O00154 380 aa14.36□□□□□ -0.11
RPP40-206ENST00000483546 UBDO15205 165 aa14.36□□□□□ -0.11
RPP40-206ENST00000483546 EDF1O60869 148 aaKnown RBP14.36□□□□□ -0.11
RPP40-206ENST00000483546 ABCB1P08183 1280 aaPredicted RBP14.36□□□□□ -0.11
RPP40-206ENST00000483546 KRT16P08779 473 aa14.36□□□□□ -0.11
RPP40-206ENST00000483546 CCL3P10147 92 aa14.36□□□□□ -0.11
RPP40-206ENST00000483546 MRPL19P49406 292 aaKnown RBP14.36□□□□□ -0.11
RPP40-206ENST00000483546 PRIM2P49643 509 aa14.36□□□□□ -0.11
RPP40-206ENST00000483546 CDK9P50750 372 aaKnown RBP14.36□□□□□ -0.11
RPP40-206ENST00000483546 TDGF1P3P51864 188 aa14.36□□□□□ -0.11
RPP40-206ENST00000483546 PSMD4P55036 377 aaKnown RBP14.36□□□□□ -0.11
RPP40-206ENST00000483546 EFR3AQ14156 821 aa14.36□□□□□ -0.11
RPP40-206ENST00000483546 IGFBP7Q16270 282 aa14.36□□□□□ -0.11
RPP40-206ENST00000483546 PGS1Q32NB8 556 aa14.36□□□□□ -0.11
RPP40-206ENST00000483546 FAM47EQ6ZV65 393 aa14.36□□□□□ -0.11
RPP40-206ENST00000483546 CPSF7Q8N684 471 aaKnown RBP14.36□□□□□ -0.11
RPP40-206ENST00000483546 NUP43Q8NFH3 380 aa14.36□□□□□ -0.11
RPP40-206ENST00000483546 OR2M7Q8NG81 312 aa14.36□□□□□ -0.11
RPP40-206ENST00000483546 OR10G3Q8NGC4 313 aa14.36□□□□□ -0.11
RPP40-206ENST00000483546 OR56A1Q8NGH5 318 aa14.36□□□□□ -0.11
RPP40-206ENST00000483546 SPPL2AQ8TCT8 520 aa14.36□□□□□ -0.11
RPP40-206ENST00000483546 SDR39U1Q9NRG7 319 aaPredicted RBP14.36□□□□□ -0.11
RPP40-206ENST00000483546 SIRT3Q9NTG7 399 aaPredicted RBP14.36□□□□□ -0.11
RPP40-206ENST00000483546 ZIM2Q9NZV7 527 aa14.36□□□□□ -0.11
RPP40-206ENST00000483546 OR10H1Q9Y4A9 318 aa14.36□□□□□ -0.11
RPP40-206ENST00000483546 ZGRF1Q86YA3 2104 aa14.36□□□□□ -0.11
RPP40-206ENST00000483546 PRSS51A0A1B0GVH4 220 aa14.35□□□□□ -0.11
RPP40-206ENST00000483546 ANKUB1A6NFN9 424 aa14.35□□□□□ -0.11
RPP40-206ENST00000483546 CFLARO15519 480 aa14.35□□□□□ -0.11
RPP40-206ENST00000483546 SNX4O95219 450 aa14.35□□□□□ -0.11
RPP40-206ENST00000483546 CBX6O95503 412 aa14.35□□□□□ -0.11
RPP40-206ENST00000483546 C6orf47O95873 294 aa14.35□□□□□ -0.11
RPP40-206ENST00000483546 S100A3P33764 101 aa14.35□□□□□ -0.11
RPP40-206ENST00000483546 IDH3AP50213 366 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms