RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 FETUBQ9UGM5 382 aa12.28□□□□□ -0.44
CTDSP1-208ENST00000482272 EMCNQ9ULC0 261 aa12.28□□□□□ -0.44
CTDSP1-208ENST00000482272 EXO1Q9UQ84 846 aaKnown RBP12.28□□□□□ -0.44
CTDSP1-208ENST00000482272 GPR55Q9Y2T6 319 aaPredicted RBP12.28□□□□□ -0.44
CTDSP1-208ENST00000482272 L3MBTL1Q9Y468 752 aa12.28□□□□□ -0.44
CTDSP1-208ENST00000482272 TACC2O95359 2948 aa12.28□□□□□ -0.44
CTDSP1-208ENST00000482272 FREM3P0C091 2139 aa12.28□□□□□ -0.44
CTDSP1-208ENST00000482272 FRG2CA6NGY1 282 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 SNPHO15079 494 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 TO15178 435 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 ABCB7O75027 752 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 REM1O75628 298 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 ACTL6AO96019 429 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 IL3P08700 152 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 PCSK2P16519 638 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 MPIP34949 423 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 KIR2DL3P43628 341 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 GSTM5P46439 218 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 NAA20P61599 178 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 PSPHP78330 225 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 MRPS35P82673 323 aaKnown RBP12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 BTKQ06187 659 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 LCP2Q13094 533 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 RCAN2Q14206 197 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 SLC29A2Q14542 456 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 TESK1Q15569 626 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 PRSS53Q2L4Q9 553 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 ERCC6LQ2NKX8 1250 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 NSUN5P2Q63ZY6 315 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 SPNS3Q6ZMD2 512 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 FAM83FQ8NEG4 500 aaPredicted RBP12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 ZNF675Q8TD23 568 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 C16orf78Q8WTQ4 265 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 EXOSC8Q96B26 276 aaKnown RBP12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 CCDC126Q96EE4 140 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 DTNBP1Q96EV8 351 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 APIPQ96GX9 242 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 WDYHV1Q96HA8 205 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 KCNA7Q96RP8 456 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 TRIB1Q96RU8 372 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 RHOXF2Q9BQY4 288 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 ACPTQ9BZG2 426 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 SHCBP1LQ9BZQ2 653 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 ANKRA2Q9H9E1 313 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 CALHM2Q9HA72 323 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 PSMC3IPQ9P2W1 217 aaPredicted RBP12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 FOXD3Q9UJU5 478 aaPredicted RBP12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 TIMM22Q9Y584 194 aa12.27□□□□□ -0.45
CTDSP1-208ENST00000482272 A0A1W2PPM1 405 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 SERTM1A2A2V5 107 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 C2orf72A6NCS6 295 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 OR6C70A6NIJ9 312 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 CD8B2A6NJW9 211 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 H3BQF6 201 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 UBFD1O14562 309 aaKnown RBP12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 UGT2B11O75310 529 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 SHBGP04278 402 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 PYGBP11216 843 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 TIA1P31483 386 aaKnown RBP eCLIP12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 KRT20P35900 424 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 PTGDSP41222 190 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 ASCL1P50553 236 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 NAGLUP54802 743 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 FOXA1P55317 472 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 WNT3P56703 355 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 ZNF628Q5EBL2 1059 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 ENPP6Q6UWR7 440 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 SH2D5Q6ZV89 423 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 YRDCQ86U90 279 aaKnown RBP12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 ZZZ3Q8IYH5 903 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 NAXEQ8NCW5 288 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 OR14L1PQ8NHC6 308 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 ZPLD1Q8TCW7 415 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 RNASE6Q93091 150 aaKnown RBP12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 TMBIM1Q969X1 311 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 COL21A1Q96P44 957 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 C12orf65Q9H3J6 166 aaKnown RBP12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 GALNT9Q9HCQ5 603 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 TNFRSF12AQ9NP84 129 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 MID1IP1Q9NPA3 183 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 SLC35C2Q9NQQ7 365 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 DNAJB12Q9NXW2 375 aaKnown RBP12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 TAS2R9Q9NYW1 312 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 EHD3Q9NZN3 535 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 SENP1Q9P0U3 644 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 TBK1Q9UHD2 729 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 EDARQ9UNE0 448 aa12.26□□□□□ -0.45
CTDSP1-208ENST00000482272 PRAMEF25A6NGN4 478 aa12.25□□□□□ -0.45
CTDSP1-208ENST00000482272 GLRA3O75311 464 aa12.25□□□□□ -0.45
CTDSP1-208ENST00000482272 ERN1O75460 977 aaKnown RBP12.25□□□□□ -0.45
CTDSP1-208ENST00000482272 ANXA4P09525 319 aaPredicted RBP12.25□□□□□ -0.45
CTDSP1-208ENST00000482272 MYL2P10916 166 aa12.25□□□□□ -0.45
CTDSP1-208ENST00000482272 CYP4B1P13584 511 aa12.25□□□□□ -0.45
CTDSP1-208ENST00000482272 CD1EP15812 388 aa12.25□□□□□ -0.45
CTDSP1-208ENST00000482272 CTSSP25774 331 aa12.25□□□□□ -0.45
CTDSP1-208ENST00000482272 OPRM1P35372 400 aa12.25□□□□□ -0.45
CTDSP1-208ENST00000482272 CCT5P48643 541 aa12.25□□□□□ -0.45
CTDSP1-208ENST00000482272 PNLIPRP2P54317 469 aa12.25□□□□□ -0.45
CTDSP1-208ENST00000482272 HMGCS1Q01581 520 aa12.25□□□□□ -0.45
CTDSP1-208ENST00000482272 C2orf80Q0P641 193 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms